DR403374

Overview
NameDR403374
Unique NameDR403374
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.081e-37
Identity = 53/128 (41.41%), Postives = 81/128 (63.28%), Query Frame = 2
Query:  167 FSNRGKLYEXCSSSSMVKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHK--LLSEANKTLKQRLME 544
            FS +GKL+E  + S M + LERY++ ++ A +  V       +S   E+ KLKAR E LQR+Q++ +GE+L  L+ KEL++LE QLD +LK IRS + Q M ++++ LQ K   L E N  L +++ E
Sbjct:   48 FSTKGKLFEYANDSCMERILERYERYSF-AEKQLVPTDHTSPVSWTLEHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQLSKKVKE 174          

HSP 2 Score: 85.8853 bits (211), Expect = 2.081e-37
Identity = 42/53 (79.25%), Postives = 48/53 (90.57%), Query Frame = 1
Query:   25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIILLQ*GK 183
            MGRGRV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV LI+    GK
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGK 53          
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.528e-37
Identity = 53/131 (40.46%), Postives = 82/131 (62.60%), Query Frame = 2
Query:  167 FSNRGKLYEXCSSSSMVKTLERYQKCNYGAPE---PNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQ--HKLLSEANKTLKQRLME 544
            FS++GKL+E  + S M + LERY +  Y   +    +VS  E   L    E+ KLKAR E L++++RN +GE+L  L+ KEL+SLE QLD ++K IRS + Q M ++++ LQ   K L + N +L +++ E
Sbjct:   48 FSSKGKLFEYSTDSCMERILERYDRYLYSDKQLVGRDVSQSENWVL----EHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKE 174          

HSP 2 Score: 87.8113 bits (216), Expect = 3.528e-37
Identity = 43/53 (81.13%), Postives = 49/53 (92.45%), Query Frame = 1
Query:   25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIILLQ*GK 183
            MGRGRV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEVALI+    GK
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGK 53          
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 4.593e-37
Identity = 53/128 (41.41%), Postives = 79/128 (61.72%), Query Frame = 2
Query:  167 FSNRGKLYEXCSSSSMVKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTEL--QHKLLSEANKTLKQRLME 544
            FS +GKL+E  + S M + LERY++ ++ A    V        S   E+ KLKAR E LQR+Q++ +GE+L  LN KEL++LE QLD +LK IRS + Q M ++++ L  Q + L E N  L +++ E
Sbjct:   48 FSTKGKLFEYANDSCMERLLERYERYSF-AERQLVPTDHTSPGSWTLEHAKLKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKE 174          

HSP 2 Score: 85.8853 bits (211), Expect = 4.593e-37
Identity = 42/53 (79.25%), Postives = 48/53 (90.57%), Query Frame = 1
Query:   25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIILLQ*GK 183
            MGRGRV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV LI+    GK
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGK 53          
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 5.357e-35
Identity = 42/53 (79.25%), Postives = 48/53 (90.57%), Query Frame = 1
Query:   25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIILLQ*GK 183
            MGRGRV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEV LI+    GK
Sbjct:    1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGK 53          

HSP 2 Score: 83.1889 bits (204), Expect = 5.357e-35
Identity = 51/128 (39.84%), Postives = 77/128 (60.16%), Query Frame = 2
Query:  167 FSNRGKLYEXCSSSSMVKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTEL--QHKLLSEANKTLKQRLME 544
            FS +GKL+E  + S M + LERY++ ++ A +  V        S   E  KLKAR E LQR+++  +GE+L  LN KEL++LE QL  +LK IRS + Q M ++++ L  Q + L E N  L +++ E
Sbjct:   48 FSTKGKLFEYATDSCMERLLERYERYSF-AEKQLVPTDHTSPGSWTLENAKLKARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKE 174          
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.543e-34
Identity = 42/53 (79.25%), Postives = 48/53 (90.57%), Query Frame = 1
Query:   25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIILLQ*GK 183
            MGRG+VE+KRIENKI RQVTF+KR++GLLKKAYELSVLCDAEV+LII    GK
Sbjct:    1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGK 53          

HSP 2 Score: 82.8037 bits (203), Expect = 1.543e-34
Identity = 57/145 (39.31%), Postives = 86/145 (59.31%), Query Frame = 2
Query:  167 FSNRGKLYEXCSSSSMVKTLERYQKCNYGAPEPNVSAREALELSS--QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHK--LLSEANKTLKQRL----MEGYQVNTLQLNP 577
            FS  GKLYE  S+  + +T+ERY +C     + N+   + LE +   +QE  KLK +YE+L R+ RNL+GE+L  ++ KEL++LERQL+ +L   R  +TQ M++ + EL+ K   L + N  LK        +G+Q   L LNP
Sbjct:   48 FSTGGKLYEF-SNVGVGRTIERYYRC-----KDNLLDNDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKLKLETEDHDFKGFQ--DLLLNP 184          
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: MAD21_ORYSJ (MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica GN=MADS21 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.434e-34
Identity = 38/53 (71.70%), Postives = 47/53 (88.68%), Query Frame = 1
Query:   25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIILLQ*GK 183
            MGRG++E+KRIENK +RQVTF KRRNGLLKKAYEL++LCDAE+ALI+    G+
Sbjct:    1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGR 53          

HSP 2 Score: 82.0333 bits (201), Expect = 4.434e-34
Identity = 59/190 (31.05%), Postives = 100/190 (52.63%), Query Frame = 2
Query:  167 FSNRGKLYEXCSSSSMVKTLERYQKCNYG----APEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKL--LSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALECEPT---LQIGYQPADPISVVTA 709
            FS+RG+LYE  + +S   T+ERY+K +      AP  +V++ +      QQE  K++ + + LQ + R+L+GE +G + +KEL+SLE +L+  + +IRS + + +   +  +Q +   L   N  L+ ++ E  +        +AED      PA   G S    LE  P     +  YQPA P+S++ A
Sbjct:   48 FSSRGRLYEFSNVNSTRSTIERYKKASASTSGSAPVIDVNSHQYF----QQEAAKMRHQIQTLQNANRHLIGESIGNMTAKELKSLENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLRAKVAEAERAEH-DDQQAAEDDEMAPAPAVGGGSSSGTELEALPATFDTREYYQPAPPVSMLAA 232          
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.528e-34
Identity = 43/61 (70.49%), Postives = 50/61 (81.97%), Query Frame = 1
Query:    1 GEERKEKKMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIILLQ*GK 183
            GE   ++K GRG++E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEVALI+    G+
Sbjct:    9 GESSPQRKAGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGR 69          

HSP 2 Score: 75.0998 bits (183), Expect = 7.528e-34
Identity = 52/162 (32.10%), Postives = 90/162 (55.56%), Query Frame = 2
Query:  167 FSNRGKLYEXCSSSSMVKTLERYQKCNYGAPEPNVSAREALELSSQ---QEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKL--LSEANKTLKQRLMEGYQVN-TLQLNPSAEDCGYGLKPAQPQGDSF 634
            FS+RG+LYE  S++S+  T+ERY+K    A   N +     E+++Q   QE  KL+ +  ++Q S R L+GE +G ++ KEL +LE +LD S+ +IRS + + +   +  +Q +   L   N+ L+ ++ E  + N ++ L P   +    + P Q Q   F
Sbjct:   64 FSSRGRLYEY-SNNSVKGTIERYKK----AISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLDRSVNRIRSKKNELLFAEIDYMQKREVDLHNDNQLLRAKIAENERNNPSMSLMPGGSNYEQIMPPPQTQPQPF 220          
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.664e-33
Identity = 42/60 (70.00%), Postives = 49/60 (81.67%), Query Frame = 1
Query:    4 EERKEKKMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIILLQ*GK 183
            +    KK+GRG++E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEVAL+I    G+
Sbjct:    9 DAESSKKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGR 68          

HSP 2 Score: 75.8702 bits (185), Expect = 1.664e-33
Identity = 49/140 (35.00%), Postives = 81/140 (57.86%), Query Frame = 2
Query:  167 FSNRGKLYEXCSSSSMVKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHK--LLSEANKTLKQRLMEGYQVNTLQLNPS 580
            FS RG+LYE  +++S+  T+ERY+K    A  P  S  EA     QQE  KL+ +   +Q S R+++GE LG LN KEL++LE +L+  + ++RS + + ++  +  +Q +   L   N  L+ ++ EG ++N  Q   S
Sbjct:   63 FSTRGRLYEY-ANNSVRGTIERYKKACSDAVNPP-SVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGARLNPDQQESS 200          
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.678e-33
Identity = 42/61 (68.85%), Postives = 50/61 (81.97%), Query Frame = 1
Query:    1 GEERKEKKMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIILLQ*GK 183
            G    ++K+GRG++E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEVALI+    G+
Sbjct:    9 GNLSPQRKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGR 69          

HSP 2 Score: 75.0998 bits (183), Expect = 3.678e-33
Identity = 50/153 (32.68%), Postives = 85/153 (55.56%), Query Frame = 2
Query:  167 FSNRGKLYEXCSSSSMVKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKL--LSEANKTLKQRLMEGYQVNT-LQLNPSAEDCGYGLKPAQ 616
            FS RG+LYE  +++S+  T+ERY+K    +P  + S  EA     QQE  KL+    ++Q++ RN++GE LG L  ++L+ LE +L+  + +IRS + + +   +  +Q K   L   N+ L+ ++ E  +    + L P + D  Y L P Q
Sbjct:   64 FSTRGRLYEY-ANNSVKGTIERYKKACTDSPNTS-SVSEANAQFYQQEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAKIAENERAQQHMNLMPGSSD--YELAPPQ 212          
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 6.233e-33
Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 1
Query:    1 GEERKEKKMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIILLQ*GK 183
            G+    +K GRG++E+KRIEN  NRQVTF KRRNGLLKKAYELSVLCDAEVALI+    G+
Sbjct:    9 GDSSPLRKSGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGR 69          

HSP 2 Score: 75.0998 bits (183), Expect = 6.233e-33
Identity = 51/162 (31.48%), Postives = 90/162 (55.56%), Query Frame = 2
Query:  167 FSNRGKLYEXCSSSSMVKTLERYQKCNYGAPEPNVSAREALELSSQ---QEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKL--LSEANKTLKQRLMEGYQVN-TLQLNPSAEDCGYGLKPAQPQGDSF 634
            FS+RG+LYE  S++S+  T+ERY+K    A   N +     E+++Q   QE  KL+ +  ++Q S R L+GE +G ++ KEL +LE +L+ S+ +IRS + + +   +  +Q +   L   N+ L+ ++ E  + N ++ L P   +    + P Q Q   F
Sbjct:   64 FSSRGRLYEY-SNNSVKGTIERYKK----AISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAENERNNPSISLMPGGSNYEQLMPPPQTQSQPF 220          
The following BLAST results are available for this feature:
BLAST of DR403374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
AGL8_SOLLC2.081e-3741.41Agamous-like MADS-box protein AGL8 homolog OS=Sola... [more]
AGL8_ARATH3.528e-3740.46Agamous-like MADS-box protein AGL8 OS=Arabidopsis ... [more]
AGL8_SOLTU4.593e-3741.41Agamous-like MADS-box protein AGL8 homolog OS=Sola... [more]
AGL8_SOLCO5.357e-3579.25Agamous-like MADS-box protein AGL8 homolog OS=Sola... [more]
AGL13_ARATH1.543e-3479.25Agamous-like MADS-box protein AGL13 OS=Arabidopsis... [more]
MAD21_ORYSJ4.434e-3471.70MADS-box transcription factor 21 OS=Oryza sativa s... [more]
AG_BRANA7.528e-3470.49Floral homeotic protein AGAMOUS OS=Brassica napus ... [more]
AGL1_ARATH1.664e-3370.00Agamous-like MADS-box protein AGL1 OS=Arabidopsis ... [more]
AG_PANGI3.678e-3368.85Floral homeotic protein AGAMOUS OS=Panax ginseng G... [more]
AG_ARATH6.233e-3368.85Floral homeotic protein AGAMOUS OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244M20 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244M20 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403374 ID=DR403374; Name=DR403374; organism=Citrus sinensis; type=EST; length=751bp
GGGGAAGAAAGAAAGGAGAAGAAAATGGGAAGGGGTAGGGTTGAGCTGAA
GAGGATAGAGAACAAGATCAACAGGCAAGTGACCTTTGCAAAGAGAAGAA
ACGGCCTTTTGAAGAAAGCTTATGAGCTTTCCGTTCTTTGTGATGCTGAG
GTTGCTCTCATCATTCTTCTCCAATAGGGGAAAGCTGTACGAGTNNTGCA
GTAGTTCAAGCATGGTCAAAACGCTTGAGAGGTACCAGAAGTGCAACTAT
GGAGCACCAGAACCGAATGTGTCCGCAAGGGAGGCCCTGGAGCTAAGTAG
CCAGCAAGAATATCTGAAGCTTAAAGCACGATATGAAGCCCTACAGAGAT
CCCAAAGGAATCTCCTTGGAGAAGAACTTGGCCCTCTAAACAGCAAAGAG
CTTGAGTCACTTGAAAGGCAGCTTGATATGTCATTGAAGCAGATCAGATC
AACAAGAACTCAGTACATGCTGGACACCCTTACTGAACTGCAACATAAGT
TGCTGAGCGAAGCAAATAAGACCCTCAAACAAAGGTTGATGGAGGGATAC
CAAGTGAACACACTTCAATTGAATCCTAGTGCAGAAGATTGTGGTTATGG
GCTTAAACCAGCTCAACCTCAGGGCGATAGCTTCTTTCACGCCTTGGAAT
GTGAACCCACATTGCAAATTGGATACCAGCCTGCGGACCCAATATCGGTT
GTCACAGCAGGCCCGAGTCTGAATAATTACATGCAAGGATGGCTACCATG
C
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