DR403367
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403367 vs. ExPASy Swiss-Prot
Match: RTNLJ_ARATH (Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 7.175e-30 Identity = 62/163 (38.04%), Postives = 97/163 (59.51%), Query Frame = 1 Query: 256 EKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKID 744 E+ +H + G AD+ +W+N++ +LG T +W LFE Y V + +LS+ +LFLW+ ++ N+ P++P + + E+FV A A+R IN LAV REI GR+ K+ V LW +S VGN+ NF+T+ Y+ VL +P +YE+Y+D ID Sbjct: 2 EESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLID 164
BLAST of DR403367 vs. ExPASy Swiss-Prot
Match: RTNLN_ARATH (Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 3.015e-28 Identity = 64/168 (38.10%), Postives = 102/168 (60.71%), Query Frame = 1 Query: 253 REKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWS--NASTFINKSPPEIPVVTLPE---KFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKI 741 R + ++H LG G+ ADI W+NKK S +LG T +W LFE++EY IT +C I +L + + +WS +S I PP I + + E +F+ +IN + L +I+SG+D + + LW+LS+VGN+ + +TL YIVFV L T+P++YE+YE+++ Sbjct: 18 RRRSLYHNLGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLIWSYIGSSQLIQSKPPSINDLRISESNWRFLFN-------KINWFIIKLYDISSGKDFRLLFLAVVSLWILSVVGNYFSSLTLLYIVFVGLETIPMLYEQYEEEL 178
BLAST of DR403367 vs. ExPASy Swiss-Prot
Match: RTNLK_ARATH (Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.146e-27 Identity = 61/160 (38.12%), Postives = 97/160 (60.62%), Query Frame = 1 Query: 265 IHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKID 744 +H LGAG AD+ LWRN+ + +L +T W LFE Y+L++ V ++ +L +A+ FLW+ ++T +N+ P +P + +PE+F + A LR IN L++ +I R+ + L V LW +S VG N +TL YI +L + P++YEKY+D ID Sbjct: 13 VHQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHID 172
BLAST of DR403367 vs. ExPASy Swiss-Prot
Match: RTNLP_ARATH (Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.425e-27 Identity = 55/172 (31.98%), Postives = 98/172 (56.98%), Query Frame = 1 Query: 229 SKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKID 744 S +RL GR+ +H +G GK AD+ LWR + +S GV+ +T W++FE +++ + ++ + + F+ + S F N+ +P + L E+ V A++ R ++N L + ++ G D + F V+ LWLLS +G++ + TL YI +L T+P +Y KY+ K+D Sbjct: 20 SSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVD 191
BLAST of DR403367 vs. ExPASy Swiss-Prot
Match: RTNLO_ARATH (Reticulon-like protein B15 OS=Arabidopsis thaliana GN=RTNLB15 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.558e-19 Identity = 55/163 (33.74%), Postives = 89/163 (54.60%), Query Frame = 1 Query: 265 IHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSN-ASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSF 750 + +LG G AD+ LW++K S L AT W L E +E L+ L+C I +L + +LFLW+ F + PP + P+ + AL + L +L EIA G+D K FL I + ++ +G++ + +T+ YI V T+PV+Y ++++ IDSF Sbjct: 4 VDQILGDGAVADLCLWKDKINSGITLVMATLFWFLLEFMEARLVPLLCSILLLLMLILFLWAKFGEVFFTRRPPTPEELNQPDSPL----KALFSMMEGHLLMLYEIAYGKDNKTFLKTILYVAIIYNIGSYISLLTILYICLVCSMTIPVVYMQFQELIDSF 162
BLAST of DR403367 vs. ExPASy Swiss-Prot
Match: RTNLM_ARATH (Reticulon-like protein B13 OS=Arabidopsis thaliana GN=RTNLB13 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.833e-17 Identity = 45/148 (30.41%), Postives = 82/148 (55.41%), Query Frame = 1 Query: 298 DIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKI 741 DI+LWR KK++ L +T+ W+L + IT+V I I ++++FLW + ++K PE+ + + E+FV+E + R + + + + + + F + G W+LS +GN +F T +I V+ TVP ++E+Y D+I Sbjct: 18 DIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKVEPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNLLDFHTCLFIGLVMGLTVPKLWEEYGDQI 165 The following BLAST results are available for this feature:
BLAST of DR403367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403367 ID=DR403367; Name=DR403367; organism=Citrus sinensis; type=EST; length=760bpback to top |