DR403360
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403360 vs. ExPASy Swiss-Prot
Match: CNGC5_ARATH (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.733e-39 Identity = 83/240 (34.58%), Postives = 137/240 (57.08%), Query Frame = 2 Query: 32 VKVFLHAVMAKKRKMQLRCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLIKKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLS--KGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYCSSNWRTWAAVNIQFAWRRYRMRTR 745 ++ +L ++ + +M+++ RD E WM Y++ +W G DE L+++LP+ LRR IKR+LCL L+++VPLF C R++P ++++ ++REGDPV M+FI+RGR++ + G S+L+ G F G+ELL+W L LP+S+ T + +EAF L ++ L+++ FR + + +++ T R+ S WRTWAA IQ AWRRY R + Sbjct: 415 MQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLPQDLRERVRRYDQYKWLETRGVDEEYLVQNLPKDLRRDIKRHLCLALVRRVPLFKSMDDKLLDAICMRLKPCLFTESTYLVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGEFCGEELLTWALDPKSGVNLPSSTRTVKALTEVEAFALTSEELKFVASQFR-RLHSRQVQHTFRFYSHQWRTWAACFIQAAWRRYCKRKK 653
BLAST of DR403360 vs. ExPASy Swiss-Prot
Match: CNG17_ARATH (Probable cyclic nucleotide-gated ion channel 17 OS=Arabidopsis thaliana GN=CNGC17 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 6.587e-39 Identity = 83/238 (34.87%), Postives = 135/238 (56.72%), Query Frame = 2 Query: 32 VKVFLHAVMAKKRKMQLRCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLIKKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLS--KGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYCSSNWRTWAAVNIQFAWRRYRMR 739 ++ +L ++ + + +L+ RD E WM YE+ +W G DE L++ LP LRR I+R+LCLDL+++VP F C+R+ + ++ ++REGD + M+FI+RGR++ + G + +L PG F G+ELLSW L LP+S+ T + +EAF L A++L+++ + FR + +++L+ T R+ S +WRTWAA IQ AWRRY+ R Sbjct: 398 MQTYLQSLTVRLEEWRLKKRDTEEWMRHRQLPEELRNRVRRYEQYKWLATRGVDEEVLLQSLPTDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLCTEGTYLVREGDLISEMLFIIRGRLESSTTNGGRTGFFNSIILRPGDFCGEELLSWALLPKSTLNLPSSTRTVRALVEVEAFALRAEDLKFVANQFR-RLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKRR 634
BLAST of DR403360 vs. ExPASy Swiss-Prot
Match: CNG16_ARATH (Probable cyclic nucleotide-gated ion channel 16 OS=Arabidopsis thaliana GN=CNGC16 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 6.165e-37 Identity = 83/238 (34.87%), Postives = 129/238 (54.20%), Query Frame = 2 Query: 32 VKVFLHAVMAKKRKMQLRCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLIKKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLS--KGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYCSSNWRTWAAVNIQFAWRRYRMR 739 V+ +L + A+ + ++R RD E WM + + +W T G DE +++ LP LRR I+R+LCL L+++VP F C+R+ P + +KD +IREGDPV M+FI+RG+++ + G + L PG F G+ELL+W L LP S+ T + +EAF L A++L+++ + FR + +++L+ RY S WR W IQ AWRRY R Sbjct: 374 VQNYLQSTTARLDEWRVRRRDTEEWMRHRQLPDELQERVRRFVQYKWLTTRGVDEEAILRALPLDLRRQIQRHLCLALVRRVPFFAQMDDQLLDAICERLVPSLNTKDTYVIREGDPVNEMLFIIRGQMESSTTDGGRSGFFNSITLRPGDFCGEELLTWALVPNINHNLPLSTRTVRTLSEVEAFALRAEDLKFVANQFR-RLHSKKLQHAFRYYSHQWRAWGTCFIQAAWRRYMKR 610
BLAST of DR403360 vs. ExPASy Swiss-Prot
Match: CNG15_ARATH (Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis thaliana GN=CNGC15 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.052e-36 Identity = 81/238 (34.03%), Postives = 130/238 (54.62%), Query Frame = 2 Query: 32 VKVFLHAVMAKKRKMQLRCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLIKKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLS--KGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYCSSNWRTWAAVNIQFAWRRYRMR 739 ++ +L + + + ++R D E WM Y++ +W G DE L+ LP LRR IKR+LC DL+++VPLF C+R++P + ++ ++REGDPV M+FI+RG + + G + ++ PG F G+ELL+W L + LP+S+ T + +EAF L A++L+++ FR + ++L+ R+ S WRTWAA IQ AWRR+R R Sbjct: 388 MQTYLQSTTMRLEEWRIRRTDTEQWMHHRQLPPELRQAVRKYDQYKWLATRGVDEEALLISLPLDLRRDIKRHLCFDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCLIGPGDFCGEELLTWALDPRPVVILPSSTRTVKAICEVEAFALKAEDLQFVASQFR-RLHTKQLRHKFRFYSHQWRTWAACFIQAAWRRHRKR 624
BLAST of DR403360 vs. ExPASy Swiss-Prot
Match: CNG18_ARATH (Putative cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana GN=CNGC18 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.166e-33 Identity = 75/244 (30.74%), Postives = 125/244 (51.23%), Query Frame = 2 Query: 44 LHAVMAKKRKMQLRCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLIKKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLS--KGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYCSSNWRTWAAVNIQFAWRRYRMRTRGPVISVTE 769 L ++ + + +++ RD E WM + + +W G DE ++ LP LRR I+R+LCL L+++VP F C + + + I REGDPV M+F++RG+I+ + G ++ L PG F G+ELL+W L LP+S+ + + +EAF L A++L+++ F+ + +++L+ RY S WR W A +Q AWRRY+ R +S+ E Sbjct: 370 LQSMSVRVEEWRVKRRDTEEWMRHRQLPPELQERVRRFVQYKWLATRGVDEESILHSLPTDLRREIQRHLCLSLVRRVPFFSQMDDQLLDAICGCLVSSLSTAGTYIFREGDPVNEMLFVIRGQIESSTTNGGRSGFFNSTTLRPGDFCGEELLTWALMPNSTLNLPSSTRSVRALSEVEAFALSAEDLKFVAHQFK-RLQSKKLQHAFRYYSHQWRAWGACFVQSAWRRYKRRKLAKELSLHE 612
BLAST of DR403360 vs. ExPASy Swiss-Prot
Match: CNGC3_ARATH (Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana GN=CNGC3 PE=2 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 7.799e-32 Identity = 78/235 (33.19%), Postives = 124/235 (52.77%), Query Frame = 2 Query: 41 FLHAVMAKKRKMQLRCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLIKKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLS--KGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYCSSNWRTWAAVNIQFAWRRYRMR 739 +L + + +M+++ RD E WM YE+ +W G +E L+ LP+ LR+ IKR+LCL L+KKVP F C R++ ++Y++ I+REG+PV M+FI+RG + + G + L G F GD LL+W L P + P SS T + +E F L A +L+++ +R + +++L+ R+ S W+TWAA IQ AW+R+ R Sbjct: 397 YLQSTTVRVEEMRVKRRDAEQWMSHRMLPDDLRKRIRKYEQYKWQETKGVEEEALLSSLPKDLRKDIKRHLCLKLLKKVPWFQAMDDRLLDALCARLKTVLYTEKSYIVREGEPVEDMLFIMRGNLISTTTYGGRTGFFNSVDLVAGDFCGD-LLTWAL-DPLSSQFPISSRTVQALTEVEGFLLSADDLKFVATQYR-RLHSKQLRHMFRFYSVQWQTWAACFIQAAWKRHCRR 628
BLAST of DR403360 vs. ExPASy Swiss-Prot
Match: CNG11_ARATH (Cyclic nucleotide-gated ion channel 11 OS=Arabidopsis thaliana GN=CNGC11 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 2.198e-26 Identity = 74/238 (31.09%), Postives = 119/238 (50.00%), Query Frame = 2 Query: 32 VKVFLHAVMAKKRKMQLRCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLIKKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLS--KGMVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYCSSNWRTWAAVNIQFAWRRYRMR 739 V+ +L + + +M+ + RD E WM +E +W G +E L++ LP+ LR KRYL L L+KKVPL C R++ + Y++ I+REG+PV M+FI+RG + + G + L G GD LL+W L + P SS T + +E F + A +L+++ +R + +++L+ R+ S W+TWAA IQ AW+R+ R Sbjct: 352 VQKYLQSSTTRVDEMEEKKRDTEKWMSYREIPEYLKERIRRFEDYKWRRTKGTEEEALLRSLPKDLRLETKRYLFLKLLKKVPLLQAMDDQLLDALCARLKTVHYTEKSYIVREGEPVEDMLFIMRGNLISTTTYGGRTGFFNSVDLIAGDSCGD-LLTWAL-YSLSSQFPISSRTVQALTEVEGFVISADDLKFVATQYR-RLHSKQLQHMFRFYSLQWQTWAACFIQAAWKRHCRR 586
BLAST of DR403360 vs. ExPASy Swiss-Prot
Match: CNG12_ARATH (Probable cyclic nucleotide-gated ion channel 12 OS=Arabidopsis thaliana GN=CNGC12 PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 6.395e-26 Identity = 73/239 (30.54%), Postives = 116/239 (48.54%), Query Frame = 2 Query: 32 VKVFLHAVMAKKRKMQLRCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLIKKVPLFH-XXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLSKGMVATSV--LEPGGFLGDELLSWCLRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYCSSNWRTWAAVNIQFAWRRYRMR 739 V+ +L + + +M+ + RD E WM +E +W G +E L++ LP+ LR KRYL LD++K+VP + CDRV+ + Y + I+REG PV M+ + RG++K + V + L+ G G+ L + RLP S+ T + +E F L ++++I H F ++L+RT R S WR+WAA IQ AWR++ R Sbjct: 352 VQKYLQSSTTRVDEMEEKRRDTEKWMSYRVIPEYLKERIRRFEDYKWRETKGTEEEALLRSLPKDLRLETKRYLYLDMLKRVPWLNIMDDGWLLEAVCDRVKSVFYLANSFIVREGHPVEEMLIVTRGKLKSTTGSHEMGVRNNCCDLQDGDICGELLFNG-------SRLPTSTRTVMTLTEVEGFILLPDDIKFIASHLNV-FQRQKLQRTFRLYSQQWRSWAAFFIQAAWRKHCKR 582
BLAST of DR403360 vs. ExPASy Swiss-Prot
Match: CNG20_ARATH (Probable cyclic nucleotide-gated ion channel 20, chloroplastic OS=Arabidopsis thaliana GN=CNGC20 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.985e-24 Identity = 77/243 (31.69%), Postives = 116/243 (47.74%), Query Frame = 2 Query: 41 FLHAVMAKKRKMQLRCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLIKKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLSKGMVATSVLEPGGFLGDELLSWCLRRPFID------RLPA----SSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYCSSNWRTWAAVNIQFAWRRYRMR 739 FL A+ + +M LR RD+E WM ER WA G +E L +++P+ L+R I+R+L +KKV +F +R++ Y ++ G V +MVFIVRG + +S+ + + E G G+ELL+WCL R ++ R+P+ SS C+ ++EAF L +L +T F + R++ RY S WR AA IQ AWR R R Sbjct: 514 FLQALGKRNLEMTLRRRDVEQWMSHRRLPDGIRRRVREAERFNWAATRGVNEELLFENMPDDLQRDIRRHL-FKFLKKVRIFSLMDEPILDAIRERLKQRTYIGSSTVLHRGGLVEKMVFIVRGEM---ESIGEDGSVLPLYE-GDVCGEELLTWCLERSSVNPDGTRIRMPSKGLLSSRNVRCVTNVEAFSLSVADLEDVTSLFSRFLRSHRVQGAIRYDSPYWRLRAARQIQVAWRYRRRR 751
BLAST of DR403360 vs. ExPASy Swiss-Prot
Match: CNG19_ARATH (Putative cyclic nucleotide-gated ion channel 19 OS=Arabidopsis thaliana GN=CNGC19 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.284e-22 Identity = 75/241 (31.12%), Postives = 114/241 (47.30%), Query Frame = 2 Query: 41 FLHAVMAKKRKMQLRCRDMEWWMXXXXXXXXXXXXXXHYERQRWATMGGEDEMELIKDLPEGLRRGIKRYLCLDLIKKVPLFHXXXXXXXXXXCDRVRPLVYSKDEKIIREGDPVPRMVFIVRGRIKRCQSLSKGMVATSVLEPGGFLGDELLSWCLRRPFID----RLP----ASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYCSSNWRTWAAVNIQFAWRRYRMR 739 FL ++ ++ +M LR RD+E WM ER WA G +E L +++P+ L+R I+R+L +KKV +F +R++ Y + ++ V +MVFIVRG ++ G V L G G+ELL+WCL D ++P S+ C+ ++EAF L +L +T F + R++ RY S WR AA+ IQ AW RYR R Sbjct: 481 FLQSLDRRRMEMMLRKRDVEQWMSHRRLPEDIRKRVREVERYTWAATRGVNEELLFENMPDDLQRDIRRHL-FKFLKKVRIFSLMDESVLDSIRERLKQRTYIRSSTVLHHRGLVEKMVFIVRGEMESIG--EDGSVLP--LSEGDVCGEELLTWCLSSINPDGTRIKMPPKGLVSNRNVRCVTNVEAFSLSVADLEDVTSLFSRFLRSHRVQGAIRYESPYWRLRAAMQIQVAW-RYRKR 715 The following BLAST results are available for this feature:
BLAST of DR403360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403360 ID=DR403360; Name=DR403360; organism=Citrus sinensis; type=EST; length=773bpback to top |