DR403322

Overview
NameDR403322
Unique NameDR403322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:53..751. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.169e-67
Identity = 117/202 (57.92%), Postives = 147/202 (72.77%), Query Frame = 3
Query:   93 EQEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 698
            E+E    AFGWAA+D+SG LSPF FSRR TGE++V  KV +CGICHSDLH +KNEW ++IYP+VPGHEI+G V+E+G+KVSKF +GDKVGVGC+V SC +C+SC  D ENYC K I TY   +HDGTI YGGYSD +V DE + V+IP   PL + APLLCAGI++YSP++++GL  P                 +FAKA G
Sbjct:    7 EKEQSVEAFGWAARDSSGHLSPFVFSRRKTGEEEVRVKVLYCGICHSDLHCLKNEWHSSIYPLVPGHEIIGEVSEIGNKVSKFNLGDKVGVGCIVDSCRTCESCREDQENYCTKAIATYNGVHHDGTINYGGYSDHIVVDERYAVKIPHTLPLVSAAPLLCAGISMYSPMKYFGLTGPDKHVGIVGLGGLGHIGVRFAKAFG 208          
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 3.699e-67
Identity = 112/170 (65.88%), Postives = 135/170 (79.41%), Query Frame = 3
Query:  114 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDK 623
            AFGWAA D SGVLSPFHFSRR  GE DVT K+  CG+CHSDLH IKN WG + YPI+PGHEIVG+ T+VG  V+KFK GD+VGVG ++GSC SC+SC  DLENYCPKV+ TY ++  DGT   GGYSD++V D  FV+ IP+G P D+ APLLCAGITVYSP+++YG+ K
Sbjct:    7 AFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTK 176          
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 254.603 bits (649), Expect = 3.699e-67
Identity = 116/201 (57.71%), Postives = 145/201 (72.14%), Query Frame = 3
Query:   96 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 698
            +EH K A GWAA+D SGVLSP++FSRRA  + DVT KV +CGICH+DLH++KN+WGN +YP+VPGHEIVGVVT VG+ V+KFK GD VGVG  VGSC +CDSC    ENYCP +++T   K + G  T GG+SD +V +EH+V+R+P G PLD  APLLCAG+TVYSP+  +GL+ PG                KFAKA G
Sbjct:   77 EEHGKAAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHVVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGFFVGSCRTCDSCGKGYENYCPTMVITSNGKDYGGAATQGGFSDAIVVNEHYVLRVPAGLPLDGAAPLLCAGVTVYSPMVIHGLNAPGKHVGVVGLGGLGHVAVKFAKAFG 277          
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 252.677 bits (644), Expect = 1.406e-66
Identity = 121/198 (61.11%), Postives = 138/198 (69.70%), Query Frame = 3
Query:  105 PKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 698
            P  A G AA+D SG LSP   SRR+TG+ DV  K+ +CGICHSDLH IKNEW N  YP+VPGHEI GVVTE G  V+KFK GDKVGVGCMV SCHSCDSC   LEN+CP VI TY +   DGT+TYGGYS ++V  E FVVR PE  PLD  APLLCAGITVYSP++++GL+ P                 KFAKA G
Sbjct:    3 PTAAAGLAARDASGHLSPLTISRRSTGDDDVVIKILYCGICHSDLHSIKNEWKNATYPLVPGHEIAGVVTEAGKNVTKFKGGDKVGVGCMVNSCHSCDSCNQGLENHCPGVIFTYNSVDKDGTVTYGGYSSMVVVHERFVVRFPEAMPLDKGAPLLCAGITVYSPMKYHGLNVPSKHVGVLGLGGLGHVAVKFAKAFG 200          
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 6.977e-66
Identity = 112/171 (65.50%), Postives = 135/171 (78.95%), Query Frame = 3
Query:  114 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTI-TYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDK 623
            AFGWAA D SGVLSPFHFSRR  GE DVT K+  CG+CHSDLH IKN WG + YPI+PGHEIVG+ T+VG  V+KFK GD+VGVG ++GSC SC+SC  DLENYCPKV+ TY ++  DGT    GGYSD++V D  FV+ IP+G P D+ APLLCAGITVYSP+++YG+ K
Sbjct:    7 AFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTSRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTK 177          
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.244e-64
Identity = 112/195 (57.44%), Postives = 138/195 (70.77%), Query Frame = 3
Query:  114 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 698
            AFGWAAKD SG LSPFHF+RR     DVT K+ +CG+CHSDLH +KN+WG T YP+VPGHEI G+VT+VGS V+KFK GD+VGVG +V SC  C+ C  DLE+YCPK + TY N  + GT T GGYSD +V  + FV++ P+  PLDA APLLCAGITVYSP+++YG+ +PG                KF KA G
Sbjct:    6 AFGWAAKDASGHLSPFHFTRRQNEADDVTLKILYCGVCHSDLHTVKNDWGFTTYPVVPGHEIAGIVTKVGSNVTKFKEGDRVGVGVIVDSCQECECCQQDLESYCPKPVFTY-NSPYKGTRTQGGYSDFVVVHQRFVLQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFG 199          
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.828e-64
Identity = 113/197 (57.36%), Postives = 140/197 (71.07%), Query Frame = 3
Query:  108 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 698
            + A G AA+D+SG LSPF  SRR+TG+ DV  K+  CGICHSDLH IKNEW ++IYP+VPGHEI GVVTEVG  V++FK GD+VGVGCMV SC SC+SC    EN+CP+ + TY +   DGT+TYGGYS ++V  E FVV  PE  PLD  APLLCAGITVY+P++++GL+ PG                KFA+A G
Sbjct:   14 QQAVGLAARDSSGHLSPFAISRRSTGDDDVAIKILFCGICHSDLHCIKNEWKHSIYPLVPGHEIAGVVTEVGKNVTRFKAGDRVGVGCMVNSCRSCESCNNGFENHCPEGVFTYNSVDKDGTVTYGGYSSMVVVHERFVVMFPEAMPLDVGAPLLCAGITVYTPMKYHGLNAPGKHVGVLGLGGLGHVAVKFARAFG 210          
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: CAD8C_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8C OS=Oryza sativa subsp. japonica GN=CAD8C PE=2 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 5.000e-64
Identity = 114/204 (55.88%), Postives = 142/204 (69.61%), Query Frame = 3
Query:   96 QEHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHD---GTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 698
            +EH K A GWAA+D SGVLSP++FSRRA  + DVT KV +CGICH+DLH++KN+WGN +YP+VPGHEIVGVVT VG+ V+KFK GD VGVG  V SC  C+ C    ENYC K++ T     HD   G  T GG+SD +V +EH+V+R+P G PLD+ APLLCAG+TVYSP+  +GL+ PG                KFAKA G
Sbjct:   77 EEHGKAAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHIVKNDWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVASCRGCECCGNGYENYCAKMVTTCNGVDHDHGGGAATQGGFSDAIVVNEHYVLRVPAGLPLDSAAPLLCAGVTVYSPMVIHGLNAPGKHVGVVGLGGLGHVAVKFAKAFG 280          
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: CAD8D_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8D OS=Oryza sativa subsp. japonica GN=CAD8D PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.362e-61
Identity = 111/195 (56.92%), Postives = 133/195 (68.21%), Query Frame = 3
Query:  114 AFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 698
            A GWAA+DTSG LSPF F+RR   E DVT KV +CGICH+DLH+IKNEWGN +YP+VPGHEIVGVVT VG+ V+KFK GD VGVG  V SC +CDSC    ENYCP +++T     + G  T GG+SD+MV  + +VVR+P   P D  APLLCAG+TVYSP+  YGL+ PG                KF KA G
Sbjct:    8 ALGWAARDTSGHLSPFSFTRRVQQEDDVTIKVLYCGICHTDLHIIKNEWGNAMYPVVPGHEIVGVVTGVGAGVTKFKAGDTVGVGYFVDSCRACDSCGKGYENYCPTMVITSNGTDYGGATTQGGFSDVMVVRQDYVVRVPASLPPDGAAPLLCAGVTVYSPMVEYGLNGPGKHLGVVGLGGLGHLGVKFGKAFG 202          
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: CADH6_ORYSJ (Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2)

HSP 1 Score: 230.72 bits (587), Expect = 5.720e-60
Identity = 110/202 (54.46%), Postives = 135/202 (66.83%), Query Frame = 3
Query:  102 HPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL---DKPGMXXXXXXXXXXXXXXXKFAKAMG 698
            H +   GWAA D SG + PF F RR  G  DVT KV +CG+CH+DLH I N+WG T+YP+VPGHEI GVVT+VG+ V+ FKVGD+VGVGC+  SC  C+ C    ENYC KV +TY   + DG+ITYGGYS ++VA + FVVRIP+  PLDA APLLCAGITVYSP++ +G+   D  G                KF KA G
Sbjct:    7 HTQTVSGWAAMDESGKIVPFVFKRRENGVDDVTIKVKYCGMCHTDLHFIHNDWGITMYPVVPGHEITGVVTKVGTNVAGFKVGDRVGVGCIAASCLDCEHCRRSEENYCDKVALTYNGIFWDGSITYGGYSGMLVAHKRFVVRIPDTLPLDAAAPLLCAGITVYSPMKQHGMLQADAAGRRLGVVGLGGLGHVAVKFGKAFG 208          
The following BLAST results are available for this feature:
BLAST of DR403322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
CADH6_ARATH2.169e-6757.92Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
CADH3_ARATH3.699e-6765.88Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
CAD8B_ORYSJ3.699e-6757.71Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
CADH5_ORYSJ1.406e-6661.11Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]
CADH2_ARATH6.977e-6665.50Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
MTDH1_STYHU2.244e-6457.44Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
CADH3_ORYSJ3.828e-6457.36Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
CAD8C_ORYSJ5.000e-6455.88Probable cinnamyl alcohol dehydrogenase 8C OS=Oryz... [more]
CAD8D_ORYSJ1.362e-6156.92Probable cinnamyl alcohol dehydrogenase 8D OS=Oryz... [more]
CADH6_ORYSJ5.720e-6054.46Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244J14 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244J14 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403322 ID=DR403322; Name=DR403322; organism=Citrus sinensis; type=EST; length=699bp
GGGGAACTTGTTTGTTCAAATACCCTAGGACGTCAAACTAAGCCAACAAA
CACCGATATCATTAAATNNNTTCTGAAATGGGGCAAGCACCGGAGCAAGA
GCACCCTAAGAACGCCTTTGGATGGGCTGCCAAGGACACTTCTGGCGTTC
TCTCCCCCTTTCACTTCTCCAGAAGAGCAACGGGAGAGAAGGATGTGACA
TTCAAAGTAACTCACTGTGGGATATGCCATTCAGATCTTCACATGATAAA
AAATGAATGGGGCAATACCATTTACCCAATCGTCCCCGGACATGAGATTG
TGGGCGTAGTGACAGAGGTCGGAAGCAAAGTGAGTAAATTCAAAGTCGGA
GACAAAGTGGGAGTAGGATGCATGGTGGGATCATGCCACTCTTGTGATAG
CTGCGCCATTGATCTTGAGAACTACTGCCCCAAAGTTATAATGACCTATG
CCAACAAGTACCATGATGGAACCATCACATACGGAGGCTACTCTGACATT
ATGGTTGCCGATGAGCACTTTGTGGTCCGTATTCCTGAAGGCACACCACT
TGACGCCACTGCCCCTCTCCTCTGTGCTGGTATCACAGTCTACAGTCCGT
TGAGATTCTATGGACTCGACAAGCCTGGTATGCATGTGGGTGTTGTCGGC
TTGGGCGGTCTAGGCCATGTCGCCGTCAAATTCGCAAAGGCTATGGGGG
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