DR403322

Overview
NameDR403322
Unique NameDR403322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:53..751. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: ADH7_HUMAN (Alcohol dehydrogenase class 4 mu/sigma chain OS=Homo sapiens GN=ADH7 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11
Identity = 45/160 (28.12%), Postives = 70/160 (43.75%), Query Frame = 3
Query:  189 KDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITY-------------GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG 629
            K+V  K+   GIC +D H+IK    +  +P++ GHE  G+V  +G  V+  K GDKV +   +  C  C++C     N C +  +T      DGT  +               +++  V DE  V +I +  P +    + C   T Y      G  KPG
Sbjct:   35 KEVRIKILATGICRTDDHVIKGTMVSK-FPVIVGHEATGIVESIGEGVTTVKPGDKV-IPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPG 192          
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: ADH_SULTO (NAD-dependent alcohol dehydrogenase OS=Sulfolobus tokodaii GN=adh PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 48/150 (32.00%), Postives = 72/150 (48.00%), Query Frame = 3
Query:  195 VTFKVTHCGICHSDLHMIKNEWGN--------TIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD 620
            V  K+   G+CHSD+HM +  +GN           P+  GHEI G + EVG +V  +  GD V V    G   +C  C I  E+ C        N  +DG   Y  Y  ++V    ++ ++   + ++A APL C+G+T Y  +R   LD
Sbjct:   28 VLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGRIEEVGDEVVGYSKGDLVAVNPWEGE-GNCYYCRIGEEHLCDSPRWLGIN--YDG--AYAEY--VLVPHYKYLYKLRRLSAVEA-APLTCSGVTTYRAVRKASLD 169          
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11
Identity = 48/148 (32.43%), Postives = 67/148 (45.27%), Query Frame = 3
Query:  192 DVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPK-VIMTYANKYHDGT--ITY-----------GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVY 593
            +V  K+   GIC SD H++        +PI+ GHE  GVV  VG  V+  K GDKV +   +  C  C+SC     N C K  +  +    +DGT   TY           G +++  VA E  VV+I    PL+    + C   T Y
Sbjct:   35 EVRIKILASGICRSDDHVLSGAL-KVNFPIILGHEAAGVVESVGEGVTSMKPGDKV-IPIFLPQCGECNSCRHPRGNVCKKSELGPFTGLLYDGTSRFTYQGKPVYHFVRTGTFTEYTVAPEDSVVKIDASAPLEKVCLIGCGFSTGY 180          
The following BLAST results are available for this feature:
BLAST of DR403322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
ADH7_HUMAN3.760e-1128.13Alcohol dehydrogenase class 4 mu/sigma chain OS=Ho... [more]
ADH_SULTO6.413e-1132.00NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]
ADH1B_UROHA6.413e-1132.43Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244J14 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244J14 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403322 ID=DR403322; Name=DR403322; organism=Citrus sinensis; type=EST; length=699bp
GGGGAACTTGTTTGTTCAAATACCCTAGGACGTCAAACTAAGCCAACAAA
CACCGATATCATTAAATNNNTTCTGAAATGGGGCAAGCACCGGAGCAAGA
GCACCCTAAGAACGCCTTTGGATGGGCTGCCAAGGACACTTCTGGCGTTC
TCTCCCCCTTTCACTTCTCCAGAAGAGCAACGGGAGAGAAGGATGTGACA
TTCAAAGTAACTCACTGTGGGATATGCCATTCAGATCTTCACATGATAAA
AAATGAATGGGGCAATACCATTTACCCAATCGTCCCCGGACATGAGATTG
TGGGCGTAGTGACAGAGGTCGGAAGCAAAGTGAGTAAATTCAAAGTCGGA
GACAAAGTGGGAGTAGGATGCATGGTGGGATCATGCCACTCTTGTGATAG
CTGCGCCATTGATCTTGAGAACTACTGCCCCAAAGTTATAATGACCTATG
CCAACAAGTACCATGATGGAACCATCACATACGGAGGCTACTCTGACATT
ATGGTTGCCGATGAGCACTTTGTGGTCCGTATTCCTGAAGGCACACCACT
TGACGCCACTGCCCCTCTCCTCTGTGCTGGTATCACAGTCTACAGTCCGT
TGAGATTCTATGGACTCGACAAGCCTGGTATGCATGTGGGTGTTGTCGGC
TTGGGCGGTCTAGGCCATGTCGCCGTCAAATTCGCAAAGGCTATGGGGG
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