DR403322

Overview
NameDR403322
Unique NameDR403322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: CADH1_ORYSJ (Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=CAD1 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 8.846e-53
Identity = 95/196 (48.47%), Postives = 127/196 (64.80%), Query Frame = 3
Query:  111 NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 698
            N   WAA+D SG+LSP+ F+RRA    DV+ ++THCG+C++D+   +N   N++YP+VPGHEI GVVTEVG+ V  FKVGD VGVG  V SC  C++C   LENYC + + T+     DGT+T GGYS  +V  E +  +IP+G PL+  APLLCAGITVYSP+  + +++PG                KF KA G
Sbjct:    9 NCDAWAARDPSGILSPYKFNRRAVQSDDVSLRITHCGVCYADVAWTRNILNNSMYPLVPGHEIAGVVTEVGADVKSFKVGDHVGVGTYVNSCRDCENCNSSLENYCSQHVFTFNGVDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLEKAAPLLCAGITVYSPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFG 204          
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: CADH2_ORYSJ (Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=CAD2 PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.971e-52
Identity = 96/197 (48.73%), Postives = 127/197 (64.47%), Query Frame = 3
Query:  108 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 698
            K   GWAA+D SG L+P++++ R TG +DV  KV +CGICH+D+H  KN  G + YP+VPGHE+VG V EVG +V+K+  GD VGVG +VG C  C  C  ++E YC K I +Y + Y DG  T GG++  MV D+ FVV+IP G   +  APLLCAG+TVYSPL+ +GL  PG+               K AK+MG
Sbjct:    8 KTVTGWAARDASGHLTPYNYTLRKTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVTKYSAGDVVGVGVIVGCCRECHPCKANVEQYCNKRIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGLTVYSPLKHFGLMSPGLRGGVLGLGGVGHMGVKVAKSMG 204          
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: CADH_SACOF (Probable cinnamyl alcohol dehydrogenase OS=Saccharum officinarum GN=CAD PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.361e-52
Identity = 95/197 (48.22%), Postives = 128/197 (64.97%), Query Frame = 3
Query:  108 KNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 698
            +   GWAA+D +G L+P+ ++ R+TG +DV  KV +CGICH+D+H  KN  G + YP+VPGHE+VG V EVG +V+K+ VGD VGVG +VG C  C  C  ++E YC K I +Y + Y DG  T GG++  MV D+ FV++IP G   +  APLLCAG+TVYSPL+ +GL  PG+               K AKAMG
Sbjct:    8 RKVVGWAARDATGHLAPYTYTLRSTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVTKYGVGDVVGVGVIVGCCRECKPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVMKIPAGLAPEQAAPLLCAGVTVYSPLKAFGLTTPGLRGAILGLGGVGHMGVKVAKAMG 204          
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: CADH4_ORYSJ (Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.081e-50
Identity = 91/196 (46.43%), Postives = 127/196 (64.80%), Query Frame = 3
Query:  111 NAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 698
            N   WAA+D SG+LSP+ F+RR    +DV+ ++THCG+C++D+   +N + ++IYP+VPGHEI GVVTEVG+ V  FKVGD VGVG  V SC  C++C   LEN+C K ++TY +   DGT+T GGYS  ++  + +  +IP   PL   APLLCAGITVY+P+  + +++PG                KF KA G
Sbjct:    9 NCDAWAARDPSGILSPYKFNRREVQSEDVSLRITHCGVCYADVIWTRNMFNDSIYPLVPGHEIAGVVTEVGADVKGFKVGDHVGVGVYVNSCQDCENCNSSLENHCSKCVVTYNSVDSDGTVTKGGYSSHILVHQRYCFKIPADYPLSKAAPLLCAGITVYTPMIRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFG 204          
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.412e-50
Identity = 98/200 (49.00%), Postives = 129/200 (64.50%), Query Frame = 3
Query:   99 EHPKNAFGWAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 698
            E  +   GWAA+D SGVLSP+ +S R TG +D+  KV  CGICHSD+H IKN+ G + YP+VPGHE+VG V EVGS+V+K++VGD+VG G +VG C SC  C  D E YC K I  Y + Y DG  T GG++  +V  + FVV+IP+G   +  A ++CAG+TVYSPL  +GL + G+               K AKAMG
Sbjct:    5 EKERTTTGWAARDPSGVLSPYTYSLRNTGPEDLYIKVLSCGICHSDIHQIKNDLGMSHYPMVPGHEVVGEVLEVGSEVTKYRVGDRVGTGIVVGCCRSCGPCNSDQEQYCNKKIWNYNDVYTDGKPTQGGFAGEIVVGQRFVVKIPDGLESEQDA-VMCAGVTVYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMG 203          
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: CADH1_ARATH (Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.701e-46
Identity = 86/192 (44.79%), Postives = 120/192 (62.50%), Query Frame = 3
Query:  123 WAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 698
            WAA+D SG+LSP   +RR+    DV+  +THCG+C++D+   +N+ G++ YP+VPGHEI G+VT+VG  V +FKVGD VGVG  V SC  C+ C    E  C K + T+    HDG++T GGYS  +V  E +  +IP   PL++ APLLCAGITVY+P+  + +++PG                KF KA G
Sbjct:   14 WAARDPSGLLSPHTITRRSVTTDDVSLTITHCGVCYADVIWSRNQHGDSKYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTFNGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVYAPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFG 205          
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.198e-45
Identity = 86/164 (52.44%), Postives = 110/164 (67.07%), Query Frame = 3
Query:  123 WAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYC-PKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFY 611
            +AA   +  L+    +RR  G  DV   +   GICHSD+H +K EWG   YP+VPGHEI GVVT VGS+V+K++ GD+VGVGC V SC  C+SC   +E YC P    TY +   DG  T GGYS+ +V DE++V+RIP+  PLD  APLLCAGIT+YSPLR +
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHW 170          
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.198e-45
Identity = 86/164 (52.44%), Postives = 110/164 (67.07%), Query Frame = 3
Query:  123 WAAKDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYC-PKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFY 611
            +AA   +  L+    +RR  G  DV   +   GICHSD+H +K EWG   YP+VPGHEI GVVT VGS+V+K++ GD+VGVGC V SC  C+SC   +E YC P    TY +   DG  T GGYS+ +V DE++V+RIP+  PLD  APLLCAGIT+YSPLR +
Sbjct:    7 YAAMSATEPLTKTTITRRDPGPHDVAIDIKFAGICHSDIHTVKAEWGQPNYPVVPGHEIAGVVTAVGSEVTKYRQGDRVGVGCFVDSCRECNSCTRGIEQYCKPGANFTYNSIGKDGQPTQGGYSEAIVVDENYVLRIPDVLPLDVAAPLLCAGITLYSPLRHW 170          
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.554e-41
Identity = 85/177 (48.02%), Postives = 107/177 (60.45%), Query Frame = 3
Query:  171 RRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPK-VIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 698
            RR     DV   +   GICHSD+H   +EWG  I+P+VPGHEI GVVT VG+KV+K  VGD+VGVGC V SC  C+ C    E +C K V+ TY +  +DG  TYGGYS  +V  + FVVRIP+   +D  +PLLCAGIT YSPL+ + +  PG                +FA AMG
Sbjct:   26 RRGLRPHDVLIDIKFSGICHSDIHSAFDEWGGGIFPMVPGHEIAGVVTAVGTKVTKLAVGDRVGVGCFVDSCGECEYCLNAEEQFCTKGVVQTYNSVDYDGNPTYGGYSQKIVVTDRFVVRIPDRLEMDVASPLLCAGITTYSPLKHWNVG-PGKKVAIVGVGGLGHLAIQFAHAMG 201          
BLAST of DR403322 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.499e-39
Identity = 86/185 (46.49%), Postives = 105/185 (56.76%), Query Frame = 3
Query:  150 LSPFHFSRRATGEKDVTFKVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVIMTYANKYHDGT-ITYGGYSDIMVADEHFVVRIPE-GTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMG 698
            L P   +RR  G  DV  ++ +CG+CHSDLH +++EW  T+YP VPGHEIVG V  VG +V K+  GD VGVGC+V SC  C+ C   LENYC  +  TY +   D    T GGYS  +V  E +V+RI      L A APLLCAGIT YSPLR +    PG                K A AMG
Sbjct:   15 LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAG-PGKKVGVVGIGGLGHMGIKLAHAMG 198          
The following BLAST results are available for this feature:
BLAST of DR403322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
CADH1_ORYSJ8.846e-5348.47Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza... [more]
CADH2_ORYSJ1.971e-5248.73Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa s... [more]
CADH_SACOF3.361e-5248.22Probable cinnamyl alcohol dehydrogenase OS=Sacchar... [more]
CADH4_ORYSJ1.081e-5046.43Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza... [more]
CADH_EUCBO1.412e-5049.00Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH1_ARATH4.701e-4644.79Probable cinnamyl alcohol dehydrogenase 1 OS=Arabi... [more]
ADHC_MYCTU5.198e-4552.44NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO5.198e-4552.44NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHA_BACSU4.554e-4148.02Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]
YAHK_ECOLI2.499e-3946.49Uncharacterized zinc-type alcohol dehydrogenase-li... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAF-PNP1244J14 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244J14 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403322 ID=DR403322; Name=DR403322; organism=Citrus sinensis; type=EST; length=699bp
GGGGAACTTGTTTGTTCAAATACCCTAGGACGTCAAACTAAGCCAACAAA
CACCGATATCATTAAATNNNTTCTGAAATGGGGCAAGCACCGGAGCAAGA
GCACCCTAAGAACGCCTTTGGATGGGCTGCCAAGGACACTTCTGGCGTTC
TCTCCCCCTTTCACTTCTCCAGAAGAGCAACGGGAGAGAAGGATGTGACA
TTCAAAGTAACTCACTGTGGGATATGCCATTCAGATCTTCACATGATAAA
AAATGAATGGGGCAATACCATTTACCCAATCGTCCCCGGACATGAGATTG
TGGGCGTAGTGACAGAGGTCGGAAGCAAAGTGAGTAAATTCAAAGTCGGA
GACAAAGTGGGAGTAGGATGCATGGTGGGATCATGCCACTCTTGTGATAG
CTGCGCCATTGATCTTGAGAACTACTGCCCCAAAGTTATAATGACCTATG
CCAACAAGTACCATGATGGAACCATCACATACGGAGGCTACTCTGACATT
ATGGTTGCCGATGAGCACTTTGTGGTCCGTATTCCTGAAGGCACACCACT
TGACGCCACTGCCCCTCTCCTCTGTGCTGGTATCACAGTCTACAGTCCGT
TGAGATTCTATGGACTCGACAAGCCTGGTATGCATGTGGGTGTTGTCGGC
TTGGGCGGTCTAGGCCATGTCGCCGTCAAATTCGCAAAGGCTATGGGGG
back to top