DR403290

Overview
NameDR403290
Unique NameDR403290
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403290 vs. ExPASy Swiss-Prot
Match: ARL2_DICDI (ADP-ribosylation factor-like protein 2 OS=Dictyostelium discoideum GN=arl2 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.740e-14
Identity = 52/179 (29.05%), Postives = 73/179 (40.78%), Query Frame = 2
Query:  176 ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEXFKWL 712
            +L  L   +KE +IL LGLDNAGKTT+L     E +    PT     + L   + K   +D+GG +  R  W                    R  + K EL  LL +E  A   FL+  NK D+  A + +E+  +L L               N    E+  CS V  +G  E   W+
Sbjct:    6 VLKKLKQKEKELRILMLGLDNAGKTTILKKFNGEDISTISPTLGFNIQTLMYKEYKLNIWDIGGQKTLRSYWRNYYEENDAVIWVIDSSDIRRIDDCKFELKKLLEEEKFAGASFLVFANKQDLDGAMTSEEISKYLDLEQL------------NTHHWEIMSCSAVTGLGLEEGIDWV 172          
BLAST of DR403290 vs. ExPASy Swiss-Prot
Match: ARL3_CAEEL (ADP-ribosylation factor-like protein 3 OS=Caenorhabditis elegans GN=arl-3 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.379e-14
Identity = 53/171 (30.99%), Postives = 77/171 (45.03%), Query Frame = 2
Query:  203 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS-IGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEXFKWL 712
            +E +IL LGLDNAGKTT+L  L  E +    PT+    + ++ +G I+   +D+GG +  R  W                   +RF E   EL  LL +E L  VP LI  NK D+  AAS +E+              K+NL     R   +  CS ++  G  +   W+
Sbjct:   16 REIRILLLGLDNAGKTTILKQLSSEDVQHVTPTKGFNVKTVAAMGDIRLNVWDIGGQRSIRPYWSNYYENIDTLIFVIDSNDKKRFDEMNIELGELLDEEKLRKVPVLIFANKQDLVTAASSEEI------------TRKLNLDLLRDRTWHIQACSALKNEGINDGITWV 174          
BLAST of DR403290 vs. ExPASy Swiss-Prot
Match: ARL1_YEAST (ADP-ribosylation factor-like protein 1 OS=Saccharomyces cerevisiae GN=ARL1 PE=1 SV=4)

HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14
Identity = 54/175 (30.86%), Postives = 75/175 (42.86%), Query Frame = 2
Query:  194 LW--QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEXFKWL 712
            LW   KE +IL LGLD AGKTT+L+ L+   +V  +PT     E LS   +K   +DLGG    R  W                   +R + + +EL  +L +E L +   L+  NK D P A S  E+   L            NLV+   R   +   S ++  G  E   WL
Sbjct:   12 LWGSNKELRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLSYKNLKLNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPGALSASEVSKEL------------NLVELKDRSWSIVASSAIKGEGITEGLDWL 174          
BLAST of DR403290 vs. ExPASy Swiss-Prot
Match: ARL1_DROME (ADP-ribosylation factor-like protein 1 OS=Drosophila melanogaster GN=Arf72A PE=1 SV=5)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 54/186 (29.03%), Postives = 82/186 (44.09%), Query Frame = 2
Query:  155 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEXFKWL 712
            +  +F G+L S     +E +IL LGLD AGKTT+L+ L+   +V   PT     E+++   +KF+ +DLGG    R  W                   +R   SK EL  +L +E LA    ++L NK D+    +  E+ + LGL N               R  ++F  S  +  G  +   WL
Sbjct:    4 VLSYFRGLLGS-----REMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELAGAILVVLANKQDMDGCMTVAEVHHALGLENLKN------------RTFQIFKTSATKGEGLDQAMDWL 172          
BLAST of DR403290 vs. ExPASy Swiss-Prot
Match: ARL11_MOUSE (ADP-ribosylation factor-like protein 11 OS=Mus musculus GN=Arl11 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 47/133 (35.34%), Postives = 65/133 (48.87%), Query Frame = 2
Query:  206 EAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSI-GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNF 601
            EA+++ +GLD+AGKTT+L+ LK  +LV   PT     E L   G +    +D+GG    R  W                    R  E+  EL  +L D ++A VPFL+L NK + P A    E+R  LGL  F
Sbjct:   12 EAQVVMMGLDSAGKTTILYKLKGNQLVDTLPTVGFNVEPLEAPGHVSLTLWDIGGQTQLRATWKDYLEGIDLLVYVLDSTDEARLPEAVAELKEVLEDPNMAGVPFLVLANKQEAPGALPLLEIRNRLGLEGF 144          
BLAST of DR403290 vs. ExPASy Swiss-Prot
Match: ARL3_XENLA (ADP-ribosylation factor-like protein 3 OS=Xenopus laevis GN=arl3 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13
Identity = 53/170 (31.18%), Postives = 73/170 (42.94%), Query Frame = 2
Query:  203 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLVDSNVRPLEVFMCSIVRKMGYGEXFKWL 712
            +E +IL LGLDNAGKTTLL  L  E +    PTQ    + +     K   +D+GG +  R  W                   +RF E+ +EL  LL +E L+ VP LI  NK D+  AA   E+   L            NL     R  ++  CS +   G  +   W+
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDVLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLLTAAPASEIAEGL------------NLHTIRDRVWQIQSCSALTGQGVQDGMNWV 173          
BLAST of DR403290 vs. ExPASy Swiss-Prot
Match: ARF_AJECA (ADP-ribosylation factor OS=Ajellomyces capsulata GN=ARF PE=1 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13
Identity = 48/150 (32.00%), Postives = 72/150 (48.00%), Query Frame = 2
Query:  155 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNFT 604
            LFD  +G        +KE +IL +GLD AGKTT+L+ LK   +V   PT     E +    I+F  +D+GG    R +W                   +R  E++ EL  +L+++ L +   L+  NK D+P A S  E+   LGL + T
Sbjct:    8 LFDRIWG--------KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRMLNEDELRDALLLVFANKQDLPNAMSPAEITQQLGLQSLT 149          
BLAST of DR403290 vs. ExPASy Swiss-Prot
Match: ARL3_TAEGU (ADP-ribosylation factor-like protein 3 OS=Taeniopygia guttata GN=ARL3 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.424e-13
Identity = 47/130 (36.15%), Postives = 62/130 (47.69%), Query Frame = 2
Query:  203 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGL 592
            +E +IL LGLDNAGKTTLL  L  E +    PTQ    + +     K   +D+GG +  R  W                   +RF E+ +EL  LL +E L+ VP LI  NK D+  AA   E+   L L
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLLTAAPASEIAEGLNL 145          
BLAST of DR403290 vs. ExPASy Swiss-Prot
Match: ARL11_HUMAN (ADP-ribosylation factor-like protein 11 OS=Homo sapiens GN=ARL11 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 47/133 (35.34%), Postives = 66/133 (49.62%), Query Frame = 2
Query:  206 EAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSI-GKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLTNF 601
            EA+++ +GLD+AGKTTLL+ LK  +LV+  PT     E L   G +    +D+GG    R  W                    R  ES  EL  +L+D ++A VPFL+L NK + P A    ++R  L L  F
Sbjct:   12 EAQVVMMGLDSAGKTTLLYKLKGHQLVETLPTVGFNVEPLKAPGHVSLTLWDVGGQAPLRASWKDYLEGTDILVYVLDSTDEARLPESAAELTEVLNDPNMAGVPFLVLANKQEAPDALPLLKIRNRLSLERF 144          
BLAST of DR403290 vs. ExPASy Swiss-Prot
Match: ARF6_RAT (ADP-ribosylation factor 6 OS=Rattus norvegicus GN=Arf6 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 44/131 (33.59%), Postives = 66/131 (50.38%), Query Frame = 2
Query:  203 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLT 595
            KE +IL LGLD AGKTT+L+ LK  + V   PT     E ++   +KF  +D+GG    R +W                   +R  E+++EL  +++D  + +   LI  NK D+P A    E++  LGLT
Sbjct:   12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLT 142          
The following BLAST results are available for this feature:
BLAST of DR403290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 161
Match NameE-valueIdentityDescription
ARL2_DICDI3.740e-1429.05ADP-ribosylation factor-like protein 2 OS=Dictyost... [more]
ARL3_CAEEL6.379e-1430.99ADP-ribosylation factor-like protein 3 OS=Caenorha... [more]
ARL1_YEAST8.331e-1430.86ADP-ribosylation factor-like protein 1 OS=Saccharo... [more]
ARL1_DROME1.088e-1329.03ADP-ribosylation factor-like protein 1 OS=Drosophi... [more]
ARL11_MOUSE1.088e-1335.34ADP-ribosylation factor-like protein 11 OS=Mus mus... [more]
ARL3_XENLA1.421e-1331.18ADP-ribosylation factor-like protein 3 OS=Xenopus ... [more]
ARF_AJECA1.421e-1332.00ADP-ribosylation factor OS=Ajellomyces capsulata G... [more]
ARL3_TAEGU2.424e-1336.15ADP-ribosylation factor-like protein 3 OS=Taeniopy... [more]
ARL11_HUMAN3.166e-1335.34ADP-ribosylation factor-like protein 11 OS=Homo sa... [more]
ARF6_RAT3.166e-1333.59ADP-ribosylation factor 6 OS=Rattus norvegicus GN=... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244H17 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244H17 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403290 ID=DR403290; Name=DR403290; organism=Citrus sinensis; type=EST; length=714bp
GGGGATTTCTAGTTTTTTCCTTCTTAGGTTTTGCTGGTATCACGCACTCG
TTGATTCCTCCTAATTATCTCAAAGATTCATCATATTTCAGCCAAAATTC
GATCTTTTTGATAGATTCATTATAAATAAGGAGTAATAAAAGAAACCCAT
GTTTTTGTTTGATTGGTTTTATGGGATTCTTGCATCTCTTGGGCTCTGGC
AAAAAGAGGCCAAGATCTTGTTTCTCGGCCTCGATAATGCCGGTAAAACG
ACGCTGCTTCATATGTTGAAAGATGAGAGATTAGTGCAACATCAACCAAC
ACAACATCCCACTTCGGAGGAACTGAGTATTGGGAAAATCAAGTTTAAGG
CTTTTGATTTGGGAGGGCATCAGATTGCTCGTAGAGTTTGGAAAGATTAC
TACGCCAAGGTTGATGCGGTTGTGTACCTGGTAGATGCGTATGACAAGGA
GAGGTTTGCTGAGTCGAAAAGGGAGCTTGATGCCCTTCTTTCAGATGAAT
CCTTGGCCAATGTTCCATTCCTTATTTTGGGCAACAAAATTGATATCCCA
TATGCTGCGTCAGAAGATGAGTTGCGATATCACCTTGGACTGACCAACTT
CACCACTGGCAAGGGTAAGGTGAATCTGGTTGATTCAAACGTTCGTCCCC
TTGAGGTATTCATGTGCAGCATTGTCCGCAAAATGGGTTACGGAGAGNNA
TTTAAGTGGCTGTC
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