DR403254

Overview
NameDR403254
Unique NameDR403254
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.423e-13
Identity = 50/144 (34.72%), Postives = 76/144 (52.78%), Query Frame = 1
Query:   49 MDLLI--NCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQ 471
            MDLL+    +L L    +  +A+S + RGR  +LPPGP P P+ GN L++G    H++L  LAK  G I  LR+GQ   VVVSSP +AK +L    + F  R     ++   F      + +      W+ +R+I  +  FT++
Sbjct:    1 MDLLLLEKTLLGLFIAAITAIAISKL-RGRRFKLPPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSR--TRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNK 141          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: C519C_DICDI (Probable cytochrome P450 519C1 OS=Dictyostelium discoideum GN=cyp519c1 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.471e-13
Identity = 58/238 (24.37%), Postives = 112/238 (47.06%), Query Frame = 1
Query:   61 INCILWLVFTLVWVMALSFVSRGRHKQ--LPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNLLSNTIFSID----LVNPNEREF-RDTVSGILEE-------AGKPNLSDHFPLLKKF 732
            +N +L + + LV  +   F+ + + K+  +P      P+IG+L +LG  PH++L KL + +G I SL LG + TV+V+ PS+ K I+     +F DR  P       F     +L ++  +  W  +RKI +  I  ++ +   +E+   + K L+  +  + +  +     +     S++++   +F  D     +N N+     D ++ + E         G  N+SD   +L+ F
Sbjct:    1 MNILLLIFYFLVCFLIFDFIKKNKVKKYDVPTLSYALPIIGHLYKLGVNPHRNLTKLVEKNGGIFSLWLGDIKTVIVTDPSINKEIMVKQFTNFSDR--PRLKSFESFTGGGVNLIFIDYNEKWPVIRKIVSSSITKTKIISNYKEVIENQTKILINSMRTHSKINEPFKSKKYFGKFSISIVLGIMFKQDNDEKQININDNNIDNDPITKLTEPIQQVFLLLGTGNISDFIKILRPF 236          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.839e-13
Identity = 59/193 (30.57%), Postives = 94/193 (48.70%), Query Frame = 1
Query:   55 LLINCILWLVFTLVWVMALSFVS--RGRHKQLPPGPRPYPVIGNLLELGAK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNLLSNTIFSI 624
            LL+   L  +F  +  +A  F+S  RG+  +LPPGP P P+ GN L++G    H++L  LAK  G I  LR+GQ   VVVSSP++AK +L    + F  R     ++   F      + +      W+ +R+I  +  FT++ +   Q+ R     +  A V+D  +  KA   G         ++ N +F I
Sbjct:    4 LLVEKTLLALFAAI--IASIFISKLRGKRFKLPPGPVPVPIFGNWLQVGDDLNHRNLTDLAKKFGEIFLLRMGQRNLVVVSSPNLAKEVLHTQGVEFGSR--TRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVV---QQYRTGWEAEAAAVVDDVKKNPKAATEGVVIRKRLQLMMYNNMFRI 189          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.839e-13
Identity = 66/241 (27.39%), Postives = 115/241 (47.72%), Query Frame = 1
Query:   55 LLINCILWLVFTLVWVMALSFVSRGRHK------QLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGP--IMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNLLSNTIFSID--LVNPNE--REFRDTVSGILEEAGKPNLSDHFPLLKKFDLQ 741
            LLI   LWL  T  +       + G++        + PGP+ +P+IG++  + +  H  +A  A       +M+  LG    +V   P +AK IL +    F DR V E+  SL F     ++ +      W++LR+I++ H+F  +++ A+ EL+R +I   + H+ +N R  +++ V Q     SL+ +  ++F  +  L +PN    +    V    +  G  N +DH P L  FD Q
Sbjct:   27 LLIMGSLWLTMTFYYWSHPGGPAWGKYYTYSPPLSIIPGPKGFPLIGSMGLMTSLAHHRIAAAAATCRAKRLMAFSLGDTRVIVTCHPDVAKEILNSS--VFADRPVKESAYSLMFNR---AIGFASYGVYWRSLRRIASNHLFCPRQIKAS-ELQRSQIAAQMVHILNNKR-HRSLRVRQVLKKASLSNMMCSVFGQEYKLHDPNSGMEDLGILVDQGYDLLGLFNWADHLPFLAHFDAQ 260          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13
Identity = 49/144 (34.03%), Postives = 76/144 (52.78%), Query Frame = 1
Query:   49 MDLLI--NCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQ 471
            MDLL+    +L L    V  + +S + RG+  +LPPGP P P+ GN L++G    H++L +LAK  G I  LR+GQ   VVVSSP +AK +L    + F  R     ++   F      + +      W+ +R+I  +  FT++
Sbjct:    1 MDLLLLEKTLLGLFLAAVVAIVVSKL-RGKRFKLPPGPLPVPIFGNWLQVGDDLNHRNLTQLAKRFGDIFLLRMGQRNLVVVSSPDLAKEVLHTQGVEFGSR--TRNVVFDIFTGEGQDMVFTVYGEHWRKMRRIMTVPFFTNK 141          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.301e-12
Identity = 56/201 (27.86%), Postives = 100/201 (49.75%), Query Frame = 1
Query:  139 QLPPGPRPYPVIGNL-LELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNLLSNTIFSIDLVNPNEREFRDTVSGILEEAGKPNLSDHFPLLKKFDL 738
            + PPGP   P+IG+L L  G  P  +LA +AK +GP+  ++LG+V +VV+SS    K  ++  D +  +R   E+I +    +    + + P S  W+ +RKI    + +S+ + +   +R+ ++  LL H+  +  AG A+D+ +     + +++    F    V  +  E    V   L  A    L+D FP  K  +L
Sbjct:   34 KFPPGPPKLPLIGHLHLLWGKLPQHALASVAKEYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACANRF--ESIGTRIMWYDNEDIIFSPYSEHWRQMRKICVSELLSSRNVRSFGFIRQDEVSRLLRHLRSS--AGAAVDMTERIETLTCSIICRAAFG--SVIRDNAELVGLVKDALSMASGFELADMFPSSKLLNL 228          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.219e-12
Identity = 47/140 (33.57%), Postives = 71/140 (50.71%), Query Frame = 1
Query:   55 LLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAK-PHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQ 471
            LL+   L   F  + V  L    RG+  +LPPGP P PV GN L++G    H++L  LAK  G I+ LR+GQ   VVVSSP ++K +L    + F  R     ++   F      + +      W+ +R+I  +  FT++
Sbjct:    4 LLLEKTLLGSFVAILVAILVSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDILLLRMGQRNLVVVSSPELSKEVLHTQGVEFGSR--TRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNK 141          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.219e-12
Identity = 54/163 (33.13%), Postives = 88/163 (53.99%), Query Frame = 1
Query:   82 VFTLVWVMALSFVSRGRHKQ-LPPGPR-PYPVIGNLLELGAKPHKSLAKL-AKI-HGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKA 558
            V  L+  +A S  S GR K  LPP P    P++G+L  +G + H SL +L AK  H   + LR G V T++VSSPS A+A+++ HD     R  P ++ S    ++   +A+ P+   W+  RK+ N H+ +++K+ + +  R +++      V DN R   A
Sbjct:   35 VLLLLASLAKSTSSSGRGKPPLPPSPPGTLPIVGHLHHIGPQTHISLQELVAKYGHNGFLFLRAGAVPTLIVSSPSAAEAVMRTHDHICASR--PWSMASHILRYNTCDVAFSPLGEYWQQTRKLMNTHLLSNKKVYSFRHGREEEV----CLVVDNLREAAA 191          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: C519B_DICDI (Probable cytochrome P450 519B1 OS=Dictyostelium discoideum GN=cyp519b1 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.219e-12
Identity = 52/193 (26.94%), Postives = 93/193 (48.19%), Query Frame = 1
Query:   58 LINCILWLVFTLVWVMALSFVSRGRHKQL--PPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNLLSNTIFSIDL 630
            LIN IL+  F L W++   F+ + R      PP P   P+IG+L +L   PH+SL +LAK++G + SL +G   TVV++  S  K +      +F +R  P++I  +      F          W+  RK+ +  + T  K+     L  K+ ++L+  + +     +     +     SLN++ + +FS ++
Sbjct:    3 LINLILY--FILFWIV-FDFIRKNRRISFNDPPSPWALPIIGHLHKLSLNPHRSLTELAKVYGGVYSLHIGDSKTVVITDVSAFKDVTIKQFKNFANRPQPKSIRVIT----NFKGLAFADYDQWQKTRKLVSSAL-TKTKIKTFNNLIEKQTENLIESMNEFSNKNELFHPRKYLTKYSLNIILSMLFSKEI 187          
BLAST of DR403254 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.898e-12
Identity = 68/240 (28.33%), Postives = 112/240 (46.67%), Query Frame = 1
Query:   49 MDLLI--NCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPH-KSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNLLSNTIF---------SIDLVNPNEREFRDTVSGILEEAGKPNLSDHFPLLKKF 732
            MDLL+    +L L    V  +A+S + RG+  +LPPGP  +PV GN L++G   + + LA L+K  G +  LR+GQ   VVVSSP MAK +L    + F  R     ++   F      + +   S  W+ +R+I  +  FT++ +   Q+ R     +    VED  +  +A   G         L+ N ++         S+D    N+ +  +     L ++ + N  D  P+L+ F
Sbjct:    1 MDLLLLEKALLGLFAAAVVAIAVSKL-RGKRFKLPPGPLGFPVFGNWLQVGDDLNQRKLANLSKKFGDVYLLRMGQRNLVVVSSPEMAKEVLHTQGVEFGSR--TRNVVFDIFTGKGQDMVFTVYSEHWRKMRRIMTVPFFTNKVV---QQQRFNWEDEAARVVEDVKKDPQAATTGIVLRRRLQLLMYNNMYRIMFDRRFESVDDPLFNKLKALNGERSRLAQSFEYNYGDFIPILRPF 234          
The following BLAST results are available for this feature:
BLAST of DR403254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
TCMO_GLYEC3.423e-1334.72Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
C519C_DICDI4.471e-1324.37Probable cytochrome P450 519C1 OS=Dictyostelium di... [more]
TCMO_ZINEL5.839e-1330.57Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
C78A3_SOYBN5.839e-1327.39Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]
TCMO_PHAAU9.960e-1334.03Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
C71DF_MENPI1.301e-1227.86Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
TCMO_POPTM2.219e-1233.57Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
C71C3_MAIZE2.219e-1233.13Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C519B_DICDI2.219e-1226.94Probable cytochrome P450 519B1 OS=Dictyostelium di... [more]
TCMO_RUTGR2.898e-1228.33Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244F14 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244F14 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403254 ID=DR403254; Name=DR403254; organism=Citrus sinensis; type=EST; length=741bp
GGGGAGTTTCAAATANNNAGAAATCAAAATATCAACNNNNATTCAAAGAT
GGATTTGTTAATTAACTGCATACTGTGGCTTGTATTCACATTGGTTTGGG
TGATGGCTTTAAGTTTCGTTTCCAGAGGACGACACAAACAGCTTCCACCG
GGACCGAGGCCTTATCCAGTGATCGGAAACCTTCTGGAGCTAGGTGCTAA
ACCTCACAAGTCACTGGCCAAGCTTGCCAAGATTCATGGGCCCATAATGA
GTCTAAGACTTGGCCAGGTGACCACAGTAGTGGTTTCTTCTCCAAGCATG
GCCAAAGCCATCCTTCAAAATCATGATTTATCATTCTGTGATCGAATGGT
CCCTGAAGCAATCTTGTCACTGCCCTTCCCGCACCATGAATTCAGTTTGG
CCTGGCTTCCAGTTTCAACAATGTGGAAAAATCTTCGAAAAATAAGCAAC
ATGCATATTTTCACTAGCCAGAAACTCGATGCCAATCAAGAGCTCCGGCG
CAAGAAAATCAAAGACCTTCTTGCTCATGTTGAAGACAATTGCCGTGCGG
GTAAAGCAATAGATGTTGGCCAAGCTGCTTTCAATACTTCACTTAATTTA
TTATCCAACACAATTTTTTCTATTGATTTGGTTAATCCCAATGAGCGAGA
GTTTAGGGATACAGTTTCTGGTATCTTGGAAGAAGCAGGAAAGCCTAACT
TGTCCGACCATTTTCCTCTTCTCAAAAAGTTTGATCTGCAG
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