DR403250

Overview
NameDR403250
Unique NameDR403250
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6079 contig Csv1_Contig6079:1..624. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.271e-33
Identity = 67/143 (46.85%), Postives = 99/143 (69.23%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFALTGSIV 621
            +IGN HQLG+  H+S ++LS++YGPVM L+ G VP+VV S+ EAA +VLK HDL+ C+RP L  +G FTYN+ DI F+ Y + WRE+RK+++LE+FS +++++F +IREEE  LL+                + +F+ T SIV
Sbjct:   37 IIGNLHQLGKSLHRSFYKLSQEYGPVMFLRFGVVPVVVFSTKEAAEEVLKTHDLETCTRPKLSATGLFTYNFKDIGFAQYGEDWREMRKLAMLELFSSKKLKAFRYIREEESELLVKKVTESAQTQTLVDLRKALFSYTASIV 179          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.660e-33
Identity = 67/143 (46.85%), Postives = 95/143 (66.43%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFALTGSIV 621
            +IGN HQLGE PH+++ +LSK YGP+M LKLG V  VV +S E  RDVLK +DL+ CSRP +    + TYN  D+ FSPY  YWR++RK++V+E+++ +RVQSF  IREEEVA  +                +K+  ++GS++
Sbjct:   38 IIGNLHQLGEKPHRAMVELSKTYGPLMSLKLGSVTTVVATSVETVRDVLKTYDLECCSRPYMTYPARITYNLKDLVFSPYDKYWRQVRKLTVVELYTAKRVQSFRHIREEEVASFVRFNKQAASSEETVNLSQKILKMSGSVI 180          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.831e-33
Identity = 69/144 (47.92%), Postives = 94/144 (65.28%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFALTGSIVF 624
            VIGN HQ+GELPH+SL  L+++YGPVMLL  G VP+ V+SS EAA +VL+ HDLD CSRP L+G+   + N+ D+ F+PY + W+  RK ++ E+F L++VQSF  IREEE   L+                + +F LT SI F
Sbjct:   39 VIGNLHQIGELPHRSLQHLAERYGPVMLLHFGFVPVTVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRNFKDVCFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQLSESAVNRSPVDLSKSLFWLTASIFF 182          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 3.697e-33
Identity = 69/144 (47.92%), Postives = 95/144 (65.97%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFALTGSIVF 624
            VIGN HQ+GELPH+SL  L+++YGPVMLL  G VP+ V+SS EAA +VL+ HDLD CSRP L+G+   + ++ DI F+PY + W+  RK ++ E+F L++VQSF  IREEE   L+                + +F LT SI+F
Sbjct:   39 VIGNLHQIGELPHRSLQHLAERYGPVMLLHFGFVPITVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRDFKDIGFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQLSESAVDRSPVDLSKSLFWLTASILF 182          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.829e-33
Identity = 67/143 (46.85%), Postives = 97/143 (67.83%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFALTGSIV 621
            +IGN HQLG+  H+S  +LS+ YGPVM L  G VP+VV+S+ EAA +VLK HDL+ C+RP L  +  F+YNY DI F+ Y D WRE+RK+++LE+FS +++++F +IREEE  +L+N               + +F+ T SIV
Sbjct:   37 IIGNLHQLGKSLHRSFHKLSQNYGPVMFLHFGVVPVVVVSTREAAEEVLKTHDLETCTRPKLTATKLFSYNYKDIGFAQYGDDWREMRKLAMLELFSSKKLKAFRYIREEESEVLVNKLSKSAETRTMVDLRKALFSYTASIV 179          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 8.237e-33
Identity = 66/143 (46.15%), Postives = 98/143 (68.53%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFALTGSIV 621
            ++GN H LG LPH++L +L+++YGPVM L+LG VP VV+SSAEAAR+VLKVHD+D CSRP   G  + +Y+  ++ F+PY +YWRE+RK+  LE+ S+RRV++  + RE+E+  L+                + +FALT  I+
Sbjct:   64 ILGNLHLLGPLPHKNLRELARRYGPVMQLRLGTVPTVVVSSAEAAREVLKVHDVDCCSRPASPGPKRLSYDLKNVGFAPYGEYWREMRKLFALELLSMRRVKAACYAREQEMDRLVADLDRAAASKASIVLNDHVFALTDGII 206          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 8.237e-33
Identity = 72/143 (50.35%), Postives = 93/143 (65.03%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFALTGSIV 621
            +IGN H L  LPH+ L  L K +GPVM L+LG VPLVVISS +AA +VLK HDLD CSRP  I S   +YN+ DI F+PY + WR LRK++V+E+FSL++  SF +IREEE  LL+                + +F L+ SIV
Sbjct:   40 IIGNLHYLNGLPHKCLLNLWKIHGPVMQLQLGYVPLVVISSNQAAEEVLKTHDLDCCSRPETIASKTISYNFKDIGFAPYGEEWRALRKLAVIELFSLKKFNSFRYIREEENDLLVKKLSEASEKQSPVNLKKALFTLSASIV 182          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.088e-32
Identity = 73/144 (50.69%), Postives = 93/144 (64.58%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFALTGSIVF 624
            +IGN HQL  L H+ L  LSKK+GPVM L+LG  P+VVISS+EAA + LK HDL+ CSRP  + S  F+ N  DI F  Y D WRELRK+SV E FS+++VQSF +IREEE  L++                + +F LT SI+F
Sbjct:   41 IIGNLHQLQGLLHKCLHDLSKKHGPVMHLRLGFAPMVVISSSEAAEEALKTHDLECCSRPITMASRVFSRNGKDIGFGVYGDEWRELRKLSVREFFSVKKVQSFKYIREEENDLMIKKLKELASKQSPVDLSKILFGLTASIIF 184          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.189e-31
Identity = 67/144 (46.53%), Postives = 95/144 (65.97%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFALTGSIVF 624
            +IGN HQLG L H SL +LS ++GPVML++ G VP+ V SS EAA++VLK HDL+ C+RP L+ +G FT+ Y DI F+ Y + WRE++K   LE+FS ++ +SF +IREEE  LL+                + +F+ T SI+F
Sbjct:   37 LIGNLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNYAQTQTLVDLRKSLFSYTASIIF 180          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.189e-31
Identity = 64/143 (44.76%), Postives = 95/143 (66.43%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFALTGSIV 621
            +IGN HQLG  PH+S+++LS+ YGP+M LK G V  VV S+ E  ++VLK  D++ CSRP +    + TYN  D+ FSPYS YWRE+RK++V+E+++ +RVQSF   R+EEVA L++               +K+  L+GS++
Sbjct:   38 IIGNLHQLGSKPHRSMFKLSETYGPLMSLKFGSVSTVVASTPETVKEVLKTFDVECCSRPNMTYPARVTYNLKDLCFSPYSKYWREVRKMTVVELYTAKRVQSFQHTRKEEVAALVDFIKQAASLEKPVNLNKKLMKLSGSVI 180          
The following BLAST results are available for this feature:
BLAST of DR403250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
C71BL_ARATH1.271e-3346.85Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C71B1_THLAR1.660e-3346.85Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C71BK_ARATH2.831e-3347.92Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71BJ_ARATH3.697e-3347.92Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C71BM_ARATH4.829e-3346.85Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71E1_SORBI8.237e-3346.154-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71BN_ARATH8.237e-3350.35Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71B4_ARATH4.088e-3250.69Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71BU_ARATH1.189e-3146.53Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71BC_ARATH1.189e-3144.76Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAF-PNP1244F10 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403250 ID=DR403250; Name=DR403250; organism=Citrus sinensis; type=EST; length=624bp
GGGGAAGCTCATTCGTTCTAAATGTTACTTATTAGCTAAATAAATANNNG
AATGNNNNNCACGTTTTCTCCCCAAACAGTATTACCCATGTGGATGTGGC
TCCCTCTTCTCCTCATCCCGCTGCTGCTCATCTTGAAAAAGCTGAAAGCA
CAAAACAAGCAGCAGCTTCCACCAAGCCCACCTAAGCTTCCAGTAATAGG
CAATTTTCACCAACTTGGAGAGTTGCCTCACCAATCTTTGTGGCAACTCT
CTAAAAAATACGGCCCCGTTATGCTCCTCAAACTTGGTCGTGTGCCTCTT
GTCGTAATCTCCTCGGCTGAGGCAGCAAGGGATGTATTAAAAGTTCATGA
TCTCGATCGTTGCAGCAGACCACCATTAATAGGCAGTGGGAAGTTTACGT
ACAACTATTCGGATATAGCTTTTTCACCATATAGCGATTACTGGAGGGAG
TTGCGGAAAATAAGTGTCCTCGAGGTATTCAGCTTGAGAAGAGTGCAGTC
ATTTGGATTCATCAGGGAAGAGGAAGTTGCCCTGCTTATGAATTCAATCT
CTGAATCATCATCCTCCGCCTCCCCTGTTGATCTTTCTGAGAAGATGTTT
GCTCTCACTGGAAGTATAGTTTTC
back to top