DR403250

Overview
NameDR403250
Unique NameDR403250
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 5.020e-14
Identity = 41/116 (35.34%), Postives = 63/116 (54.31%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLM 540
            +IGN H L    H++   LS+KYG V  L  G   +VV+SSA   +     +D+   +RP  +      YNY+ +  + Y ++WR LR+I+ L+V S  R+ SF  IR +E   L+
Sbjct:   41 IIGNLHHLKRPLHRTFKGLSEKYGHVFSLWFGSRLVVVVSSASEFQQCFTKNDVVLANRPRFLSGKYIFYNYTTLGSTSYGEHWRNLRRITALDVLSNHRINSFSGIRRDETQRLI 156          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.118e-13
Identity = 41/114 (35.96%), Postives = 72/114 (63.16%), Query Frame = 1
Query:  193 VIGNFHQLGE-LPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVA 531
            V GN+ Q+G+ L H++L  L+KK+G ++LL++G+  LVV+SS E +++VL    ++  SR   +    FT    D+ F+ Y ++WR++R+I  +  F+ + VQ + +  EEE A
Sbjct:   42 VFGNWLQVGDDLNHRNLTDLAKKFGDILLLRMGQRNLVVVSSPELSKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAA 155          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.118e-13
Identity = 48/120 (40.00%), Postives = 67/120 (55.83%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKI---SVLEVFSLRRVQSFGFIREEEVALLMN 543
            ++GN  QLG  PH+SL   SK YGP+M LKLGR+  VVISS EAA++ L+ HD    +R        F ++   I + P S  WR L+K     +L   +L  +QS    + EE+  L+N
Sbjct:   47 LVGNIFQLGFNPHRSLAAFSKTYGPIMSLKLGRLTAVVISSPEAAKEALRTHDHVMSARTFNDALRAFDHHKHSIVWIPPSARWRFLKKTITKYLLSPQNLDAIQSLRMRKVEELVSLVN 166          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.250e-13
Identity = 40/114 (35.09%), Postives = 71/114 (62.28%), Query Frame = 1
Query:  193 VIGNFHQLGE-LPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVA 531
            V GN+ Q+G+ L H++L  L+KK+G + LL++G+  LVV+SS + +++VL    ++  SR   +    FT    D+ F+ Y ++WR++R+I  +  F+ + VQ + +  EEE A
Sbjct:   42 VFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPDLSKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAA 155          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.250e-13
Identity = 41/114 (35.96%), Postives = 70/114 (61.40%), Query Frame = 1
Query:  193 VIGNFHQLGE-LPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVA 531
            V GN+ Q+G+ L H++L   +KK+G + LL++G+  LVV+SS E A++VL    ++  SR   +    FT    D+ F+ Y ++WR++R+I  +  F+ + VQ + +  EEE A
Sbjct:   42 VFGNWLQVGDDLNHRNLSDYAKKFGEIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAA 155          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C75AK_ARATH (Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=CYP705A20 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.250e-13
Identity = 44/120 (36.67%), Postives = 69/120 (57.50%), Query Frame = 1
Query:  193 VIGNFHQL-GELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSR--PP-----LIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEV 528
            +IG+ H L   L H+SL QLS KYGP++ L +   P+V++SSA  A ++ K HDL+  SR  PP     L+GS  F         +PY DYW+ ++K+ V ++   + ++    IR +E+
Sbjct:   48 IIGHLHHLLSSLAHKSLQQLSSKYGPLLHLSIFNFPVVLVSSASVAYEIFKAHDLNISSRDNPPINESLLVGSSVF-------VGAPYGDYWKFMKKLLVTKLLGPQALERSRSIRADEL 160          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.551e-13
Identity = 37/111 (33.33%), Postives = 64/111 (57.66%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEE 525
            +IG+ H +  +PHQ  ++LS ++GP+M L LG VP VV S+AEAA++ LK H+++  +RP           +    F PY    + ++K+ + E+   R +  F  +R++E
Sbjct:   38 IIGHLHLVSPIPHQDFYKLSLRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRP----GQNVAVQFLTYVFGPYGPSVKFIKKLCMSELLGGRMLDQFLPVRQQE 144          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.250e-13
Identity = 44/114 (38.60%), Postives = 69/114 (60.53%), Query Frame = 1
Query:  193 VIGNFHQLGE-LPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVA 531
            V GN+ Q+G+ L  + L  LSKK+G V LL++G+  LVV+SS E A++VL    ++  SR   +    FT    D+ F+ YS++WR++R+I  +  F+ + VQ   F  E+E A
Sbjct:   42 VFGNWLQVGDDLNQRKLANLSKKFGDVYLLRMGQRNLVVVSSPEMAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYSEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAA 155          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.468e-13
Identity = 40/117 (34.19%), Postives = 71/117 (60.68%), Query Frame = 1
Query:  193 VIGNFHQLGE-LPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLM 540
            + GN+ Q+G+ L H++L  L+KK+G + LL++G+  LVV+SS E A++VL    ++  SR   +    FT    D+ F+ Y ++WR++R+I  +  F+ + VQ +    E E A ++
Sbjct:   42 IFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWESEAAAVV 158          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.237e-12
Identity = 41/114 (35.96%), Postives = 70/114 (61.40%), Query Frame = 1
Query:  193 VIGNFHQLGE-LPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVA 531
            V GN+ Q+G+ L  ++L   +KK+G + +L++G+  LVV+SS E A+DVL    ++  SR   +    FT    D+ F+ YS++WR++R+I  +  F+ + VQ + F  E+E A
Sbjct:   43 VFGNWLQVGDDLNQRNLVDYAKKFGDLFMLRMGQRNLVVVSSPELAKDVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYSEHWRKMRRIMTVPFFTNKVVQQYRFGWEDEAA 156          
The following BLAST results are available for this feature:
BLAST of DR403250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
C81E1_GLYEC5.020e-1435.34Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
TCMO_POPTM1.118e-1335.96Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
C76C3_ARATH1.118e-1340.00Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_POPKI4.250e-1335.09Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_CATRO4.250e-1335.96Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
C75AK_ARATH4.250e-1336.67Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=... [more]
C93A2_SOYBN5.551e-1333.33Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
TCMO_RUTGR7.250e-1338.60Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
TCMO_SOYBN9.468e-1334.19Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_PETCR1.237e-1235.96Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244F10 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403250 ID=DR403250; Name=DR403250; organism=Citrus sinensis; type=EST; length=624bp
GGGGAAGCTCATTCGTTCTAAATGTTACTTATTAGCTAAATAAATANNNG
AATGNNNNNCACGTTTTCTCCCCAAACAGTATTACCCATGTGGATGTGGC
TCCCTCTTCTCCTCATCCCGCTGCTGCTCATCTTGAAAAAGCTGAAAGCA
CAAAACAAGCAGCAGCTTCCACCAAGCCCACCTAAGCTTCCAGTAATAGG
CAATTTTCACCAACTTGGAGAGTTGCCTCACCAATCTTTGTGGCAACTCT
CTAAAAAATACGGCCCCGTTATGCTCCTCAAACTTGGTCGTGTGCCTCTT
GTCGTAATCTCCTCGGCTGAGGCAGCAAGGGATGTATTAAAAGTTCATGA
TCTCGATCGTTGCAGCAGACCACCATTAATAGGCAGTGGGAAGTTTACGT
ACAACTATTCGGATATAGCTTTTTCACCATATAGCGATTACTGGAGGGAG
TTGCGGAAAATAAGTGTCCTCGAGGTATTCAGCTTGAGAAGAGTGCAGTC
ATTTGGATTCATCAGGGAAGAGGAAGTTGCCCTGCTTATGAATTCAATCT
CTGAATCATCATCCTCCGCCTCCCCTGTTGATCTTTCTGAGAAGATGTTT
GCTCTCACTGGAAGTATAGTTTTC
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