DR403250

Overview
NameDR403250
Unique NameDR403250
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.237e-12
Identity = 35/116 (30.17%), Postives = 71/116 (61.21%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLM 540
            ++GN + +  +  +  ++ ++ YGP++ + +G +  VV+SSAE A++VLK HD     R     +  F+ N  D+ ++ Y  ++ ++RK+  LE+F+ +R++S   IRE+EV  ++
Sbjct:   36 IVGNLYDIKPVRFRCYYEWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMV 151          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.109e-12
Identity = 41/118 (34.75%), Postives = 72/118 (61.02%), Query Frame = 1
Query:  193 VIGNFHQLGE-LPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMN 543
            V GN+ Q+G+ L H++L  L+K++  ++LL++ +  LVVISS E A++VL    ++  SR   +    FT    DI F+ Y ++WR++R+I  +  F+ + VQ + F  E E A +++
Sbjct:   42 VFGNWLQVGDDLNHRNLTDLAKRFAEILLLRMEQRNLVVISSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDIVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWESEAASVVD 159          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.755e-12
Identity = 47/116 (40.52%), Postives = 65/116 (56.03%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLM 540
            ++GN  QLG LPH +L  +++K+GP+MLL LG V  V  SS    R   + +   R  RP   GS              Y +YWR+L+ I V+++ S +RVQSF  +REEE  LLM
Sbjct:   58 ILGNLLQLGSLPHHNLRSMARKHGPIMLLHLGSVRPV--SSRRRPRGNHE-NSRSRLRRPR--GSRSAALQLQG-RVGGYGEYWRQLKTICVVQLLSNKRVQSFRSVREEETELLM 167          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.699e-12
Identity = 39/118 (33.05%), Postives = 71/118 (60.17%), Query Frame = 1
Query:  193 VIGNFHQLGE-LPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMN 543
            + GN+ Q+G+ L H++L  L+KK+G + LL++G+  LVV+SS   A++VL    ++  SR   +    FT    D+ F+ Y ++WR++R+I  +  F+ + VQ +    E E A +++
Sbjct:   42 IFGNWLQVGDDLNHRNLTDLAKKFGEIFLLRMGQRNLVVVSSPNLAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRTGWEAEAAAVVD 159          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.367e-11
Identity = 36/116 (31.03%), Postives = 66/116 (56.90%), Query Frame = 1
Query:  196 IGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLK-VHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLM 540
            +G+ H +    H+ L + S +YGP+  L+ G   +VVI+S   A++     +D+   SRP  + +    YN++ +  +PY D+WR LR+I   E+ S  R+ +F  IR++E+  ++
Sbjct:   38 VGHLHLMKPPIHRLLQRYSNQYGPIFSLRFGSRRVVVITSPSLAQESFTGQNDIVLSSRPLQLTAKYVAYNHTTVGTAPYGDHWRNLRRICSQEILSSHRLINFQHIRKDEILRML 153          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.367e-11
Identity = 33/110 (30.00%), Postives = 62/110 (56.36%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREE 522
            + GN  +LG  P++ +  L +KYGPV+ LKLG    +V+ +A+A+ ++ K HD+   +R     +   +Y    +A +PY  +WR  R+I  +E+F  +++     +R +
Sbjct:   44 IFGNMFELGTEPYKKMAVLRQKYGPVLWLKLGSTYTMVVQTAQASEELFKNHDISFANRVIPDVNQAHSYYQGSLAIAPYGPFWRFQRRICTIEMFVHKKISETEPVRRK 153          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.786e-11
Identity = 35/111 (31.53%), Postives = 63/111 (56.76%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEE 525
            ++GN  QLGE PH    +L++ YG +  LK+G   +VV S++ AA ++LK HD    +R          +  + I +S  ++ W+ LRK+   E+F+ + ++S   +RE++
Sbjct:   38 IVGNLLQLGEKPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKK 148          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.786e-11
Identity = 35/111 (31.53%), Postives = 63/111 (56.76%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEE 525
            ++GN  QLGE PH    +L++ YG +  LK+G   +VV S++ AA ++LK HD    +R          +  + I +S  ++ W+ LRK+   E+F+ + ++S   +RE++
Sbjct:   37 IVGNLLQLGEKPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKK 147          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71AS_ARATH (Putative cytochrome P450 71A28 OS=Arabidopsis thaliana GN=CYP71A28 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.786e-11
Identity = 40/116 (34.48%), Postives = 58/116 (50.00%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLV----VISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEV 528
            VIG  HQL   PH+S   LS +        L   P       ISS++ A DV+K HDL   +RP             D+AFS Y +YWR+++ +  + +   + V+SF  +REEE+
Sbjct:   40 VIGYLHQLSLHPHRSFRSLSLRLWSAHAPSLRSCPYPRFSKYISSSDVAHDVMKTHDLKFANRPKTKAVDIIINGGRDVAFSSYGEYWRQMKSLCTVHLLGRQMVRSFEKVREEEI 155          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.332e-11
Identity = 35/116 (30.17%), Postives = 71/116 (61.21%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLM 540
            V+GN  Q+  +  +   + +++YGPV+ +  G    VV+S++E A++VLK +D     RP    + +F+ N  D+ ++ Y  ++ ++RK+  LE+F+ +R+++   IRE+EV  ++
Sbjct:   40 VLGNLRQIKPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMV 155          
The following BLAST results are available for this feature:
BLAST of DR403250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
C98A3_ARATH1.237e-1230.17Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
TCMO_PEA2.109e-1234.75Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
C71A8_MENPI2.755e-1240.52Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]
TCMO_ZINEL4.699e-1233.05Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
C81F1_ARATH1.367e-1131.03Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C76A2_SOLME1.367e-1130.00Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C80B2_ESCCA1.786e-1131.53(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C80B1_ESCCA1.786e-1131.53(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C71AS_ARATH1.786e-1134.48Putative cytochrome P450 71A28 OS=Arabidopsis thal... [more]
C98A1_SORBI2.332e-1130.17Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244F10 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403250 ID=DR403250; Name=DR403250; organism=Citrus sinensis; type=EST; length=624bp
GGGGAAGCTCATTCGTTCTAAATGTTACTTATTAGCTAAATAAATANNNG
AATGNNNNNCACGTTTTCTCCCCAAACAGTATTACCCATGTGGATGTGGC
TCCCTCTTCTCCTCATCCCGCTGCTGCTCATCTTGAAAAAGCTGAAAGCA
CAAAACAAGCAGCAGCTTCCACCAAGCCCACCTAAGCTTCCAGTAATAGG
CAATTTTCACCAACTTGGAGAGTTGCCTCACCAATCTTTGTGGCAACTCT
CTAAAAAATACGGCCCCGTTATGCTCCTCAAACTTGGTCGTGTGCCTCTT
GTCGTAATCTCCTCGGCTGAGGCAGCAAGGGATGTATTAAAAGTTCATGA
TCTCGATCGTTGCAGCAGACCACCATTAATAGGCAGTGGGAAGTTTACGT
ACAACTATTCGGATATAGCTTTTTCACCATATAGCGATTACTGGAGGGAG
TTGCGGAAAATAAGTGTCCTCGAGGTATTCAGCTTGAGAAGAGTGCAGTC
ATTTGGATTCATCAGGGAAGAGGAAGTTGCCCTGCTTATGAATTCAATCT
CTGAATCATCATCCTCCGCCTCCCCTGTTGATCTTTCTGAGAAGATGTTT
GCTCTCACTGGAAGTATAGTTTTC
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