DR403250

Overview
NameDR403250
Unique NameDR403250
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.195e-11
Identity = 33/117 (28.21%), Postives = 70/117 (59.83%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMN 543
            V+GN + +  +  +   + ++ YGP++ +  G    V++S++E A++VLK HD     R     + KF+ +  D+ ++ Y  ++ ++RK+  LE+FS +R+++   IRE+EV  +++
Sbjct:   37 VVGNLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVD 153          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.862e-11
Identity = 37/112 (33.04%), Postives = 63/112 (56.25%), Query Frame = 1
Query:  199 GNFHQL-GELPHQSLWQLSKKYGPVMLLKLGR-VPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEV 528
            GN   L G  P++ +  L +KYGP++ LK+G  +  +VI +A +A ++ + HD+    RP +  +    Y    +A +PY +YWR  R+I  +E+F  +R+     IR+E V
Sbjct:    2 GNMFDLAGSAPYKKIACLKEKYGPILWLKIGSSMNTMVIQTANSASELFRNHDVSFSDRPIVDVNLAHNYYKGSMALAPYGNYWRFSRRICTVEMFVHKRINETTNIRQESV 113          
The following BLAST results are available for this feature:
BLAST of DR403250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
C98A2_SOYBN5.195e-1128.21Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C76A1_SOLME8.862e-1133.04Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244F10 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403250 ID=DR403250; Name=DR403250; organism=Citrus sinensis; type=EST; length=624bp
GGGGAAGCTCATTCGTTCTAAATGTTACTTATTAGCTAAATAAATANNNG
AATGNNNNNCACGTTTTCTCCCCAAACAGTATTACCCATGTGGATGTGGC
TCCCTCTTCTCCTCATCCCGCTGCTGCTCATCTTGAAAAAGCTGAAAGCA
CAAAACAAGCAGCAGCTTCCACCAAGCCCACCTAAGCTTCCAGTAATAGG
CAATTTTCACCAACTTGGAGAGTTGCCTCACCAATCTTTGTGGCAACTCT
CTAAAAAATACGGCCCCGTTATGCTCCTCAAACTTGGTCGTGTGCCTCTT
GTCGTAATCTCCTCGGCTGAGGCAGCAAGGGATGTATTAAAAGTTCATGA
TCTCGATCGTTGCAGCAGACCACCATTAATAGGCAGTGGGAAGTTTACGT
ACAACTATTCGGATATAGCTTTTTCACCATATAGCGATTACTGGAGGGAG
TTGCGGAAAATAAGTGTCCTCGAGGTATTCAGCTTGAGAAGAGTGCAGTC
ATTTGGATTCATCAGGGAAGAGGAAGTTGCCCTGCTTATGAATTCAATCT
CTGAATCATCATCCTCCGCCTCCCCTGTTGATCTTTCTGAGAAGATGTTT
GCTCTCACTGGAAGTATAGTTTTC
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