DR403250

Overview
NameDR403250
Unique NameDR403250
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6079 contig Csv1_Contig6079:1..624. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.408e-24
Identity = 54/114 (47.37%), Postives = 77/114 (67.54%), Query Frame = 1
Query:  193 VIGNFHQLG---ELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEE 525
            +IGN HQL     LP Q+L +L +KYGP+M L+LG +  +V+SS + A +++K HD+    RP L+      Y  +DIAF+PY DYWR++RKI  LE+ S +RVQSF  IR++E
Sbjct:   42 IIGNLHQLALAASLPDQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDE 155          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.839e-24
Identity = 57/117 (48.72%), Postives = 81/117 (69.23%), Query Frame = 1
Query:  193 VIGNF-HQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLM 540
            +IG+  H +G  PH+ L  L+KKYGP+M L+LG V  +++SSAE A++V+K HD+   SRP  + +    Y  +DI FSPY DYWR++RKI  +E+ S++RVQS   IREEEV  L+
Sbjct:   28 IIGSIPHLVGSPPHRKLRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASRPRSLFTDIVFYGSTDIGFSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEEVKNLI 144          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.402e-24
Identity = 59/118 (50.00%), Postives = 81/118 (68.64%), Query Frame = 1
Query:  193 VIGNFHQL-GELP-HQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLM 540
            +IGN HQ+ G LP H  L  L+ KYGP+M LKLG V  ++++S E A++++K HDL+   RP  + S   +YN S I FS + DYWR+LRKI  +E+ + +RVQSF  IREEEVA L+
Sbjct:   52 LIGNIHQIVGSLPVHYYLKNLADKYGPLMHLKLGEVSNIIVTSPEMAQEIMKTHDLNFSDRPDFVLSRIVSYNGSGIVFSQHGDYWRQLRKICTVELLTAKRVQSFRSIREEEVAELV 169          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.137e-24
Identity = 53/116 (45.69%), Postives = 75/116 (64.66%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLM 540
            VIGN HQL   PH+SL  LS +YGP+MLL  GRVP++V+SS+EAA ++LK HDL   +RP             D+ F PY +YWR+++ + +L + + + V SF  +REEEV  +M
Sbjct:   42 VIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKVREEEVNAMM 157          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.098e-24
Identity = 57/117 (48.72%), Postives = 79/117 (67.52%), Query Frame = 1
Query:  196 IGNFHQL-GELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMN 543
            IG+ H L G  PH+ L  L+KKYGP+M L+LG V  VV++S + A++VLK HD+   SRP L+      Y+  DIAFSPY +YW+++RKI V EV S + V+SF  IR +EV  L++
Sbjct:   41 IGSMHHLAGGRPHRVLRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLLAMDIICYDRCDIAFSPYGEYWKQMRKICVTEVLSAKSVRSFSSIRCDEVVRLID 157          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.989e-24
Identity = 57/112 (50.89%), Postives = 74/112 (66.07%), Query Frame = 1
Query:  193 VIGNFHQL--GELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREE 522
            +IGN H L    LPH  L  LS KYG +M LKLG V  +V+SS E A++V+K HD    SRP ++ +    Y++  +AF+PY DYWR+LRKI  LE+ S +RVQSF  IREE
Sbjct:   44 IIGNMHNLVGSPLPHHRLRDLSAKYGSLMHLKLGEVSTIVVSSPEYAKEVMKTHDHIFASRPYVLAAEIMDYDFKGVAFTPYGDYWRQLRKIFALELLSSKRVQSFQPIREE 155          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.989e-24
Identity = 52/116 (44.83%), Postives = 77/116 (66.38%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLM 540
            VIGN HQL   PH++L  LS ++GP+MLL+ GRVP++++SSA+ A DV+K HDL   +RP    + K +    D+ F+PY +YWR ++ +  + + S + VQS    REEE+ LLM
Sbjct:   41 VIGNLHQLSLHPHRALSSLSARHGPLMLLRFGRVPVLIVSSADVAHDVMKTHDLKFANRPITKSAHKISNGGRDLVFAPYGEYWRNVKSLCTIHLLSNKMVQSSEKRREEEITLLM 156          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.469e-23
Identity = 52/112 (46.43%), Postives = 73/112 (65.18%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEV 528
            +IGN HQL   PH+SL  LS +YGP+MLL  GRVP++V+SS EAA++VLK HDL   +RP             D+ F PY +YWR+++ + +L + + + V SF  IREEE+
Sbjct:   42 LIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDLKFANRPRSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKIREEEL 153          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.917e-23
Identity = 51/112 (45.54%), Postives = 74/112 (66.07%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEV 528
            VIGN HQL   PH+SL  LS +YGP+MLL  GRVP++V+SS EAA++VLK HD    +RP             D+ F+PY +YWR+++ + +L + + + V+SF  +RE+EV
Sbjct:   42 VIGNLHQLSLHPHRSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRDVVFAPYGEYWRQMKSVCILNLLTNKMVESFEKVREDEV 153          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.722e-22
Identity = 55/114 (48.25%), Postives = 77/114 (67.54%), Query Frame = 1
Query:  193 VIGNFHQL-GELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKF-TYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEV 528
            ++GN HQL G   H  L  L+KKYGP+M LK+G V  +V SS + A ++ + HD+    RP  + S K  +Y++SD+  SPY +YWR+LRKIS++E+ S + VQSF  IREEEV
Sbjct:   35 ILGNAHQLSGGHTHHILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADRPSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEV 148          
The following BLAST results are available for this feature:
BLAST of DR403250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
C71D8_SOYBN1.408e-2447.37Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71DB_LOTJA1.839e-2448.72Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71DA_SOYBN2.402e-2450.00Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71AI_ARATH3.137e-2445.69Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71D6_SOLCH4.098e-2448.72Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71D9_SOYBN6.989e-2450.89Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71AG_ARATH6.989e-2444.83Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH3.469e-2346.43Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C71AD_ARATH5.917e-2345.54Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C71DC_CATRO1.722e-2248.25Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244F10 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403250 ID=DR403250; Name=DR403250; organism=Citrus sinensis; type=EST; length=624bp
GGGGAAGCTCATTCGTTCTAAATGTTACTTATTAGCTAAATAAATANNNG
AATGNNNNNCACGTTTTCTCCCCAAACAGTATTACCCATGTGGATGTGGC
TCCCTCTTCTCCTCATCCCGCTGCTGCTCATCTTGAAAAAGCTGAAAGCA
CAAAACAAGCAGCAGCTTCCACCAAGCCCACCTAAGCTTCCAGTAATAGG
CAATTTTCACCAACTTGGAGAGTTGCCTCACCAATCTTTGTGGCAACTCT
CTAAAAAATACGGCCCCGTTATGCTCCTCAAACTTGGTCGTGTGCCTCTT
GTCGTAATCTCCTCGGCTGAGGCAGCAAGGGATGTATTAAAAGTTCATGA
TCTCGATCGTTGCAGCAGACCACCATTAATAGGCAGTGGGAAGTTTACGT
ACAACTATTCGGATATAGCTTTTTCACCATATAGCGATTACTGGAGGGAG
TTGCGGAAAATAAGTGTCCTCGAGGTATTCAGCTTGAGAAGAGTGCAGTC
ATTTGGATTCATCAGGGAAGAGGAAGTTGCCCTGCTTATGAATTCAATCT
CTGAATCATCATCCTCCGCCTCCCCTGTTGATCTTTCTGAGAAGATGTTT
GCTCTCACTGGAAGTATAGTTTTC
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