DR403250

Overview
NameDR403250
Unique NameDR403250
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6079 contig Csv1_Contig6079:1..624. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 3.247e-21
Identity = 50/143 (34.97%), Postives = 77/143 (53.85%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFALTGSIV 621
            VIGN HQLG  PH+ L  LS +YGP+MLL  GRVP++V+S  +   D++K HDL   +RP       F     DI F PY + W+ ++ + V+ + + + V+SF  +REEE+ ++                 + +  LT  I+
Sbjct:   42 VIGNLHQLGPNPHRYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGGRDIIFGPYGEDWKSMKSLGVVHLLNNKMVRSFENLREEEIKVMTEKLEEASSSSSSVNLSKLLMTLTNDII 184          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.446e-21
Identity = 56/118 (47.46%), Postives = 80/118 (67.80%), Query Frame = 1
Query:  193 VIGNFHQL-GELPHQSLWQ-LSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLM 540
            VIG+ H L G LP Q L + ++++YGPV  ++LG V  VV+SSAEAA+  +KV D +   R   +GS    Y+  DI FSPY+D+W ++RKI V E+ S + V+SFGFIR+EE+  L+
Sbjct:   40 VIGHLHLLWGGLPPQHLLRSIAREYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDSVGSRIMWYDNDDIIFSPYNDHWHQMRKICVSELLSPKNVRSFGFIRQEEIERLI 157          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.123e-20
Identity = 53/144 (36.81%), Postives = 82/144 (56.94%), Query Frame = 1
Query:  193 VIGNFHQLGEL-PHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFALTGSIV 621
            +IGN HQ+ +  P   L++LSK YGP+  +K+G   L VISSAE A+++LK  DL+  +RP L G    +Y   ++ F  Y+ Y+RE+RK+ ++ +FS  RV SF  +REEE   +M+               E + + T  +V
Sbjct:   38 IIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVV 181          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.508e-18
Identity = 49/144 (34.03%), Postives = 84/144 (58.33%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFALTGSIVF 624
            +IGN   + +L H+ L  L+KKYG +  L++G + +  +SS E AR VL+V D    +RP  I     TY+ +D+AF+ Y  +WR++RK+ V++VFS +R +S+  +R+E   ++ +               E++FALT +I +
Sbjct:   49 IIGNMLMMDQLTHRGLANLAKKYGGLCHLRMGFLHMYAVSSPEVARQVLQVQDSVFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKVCVMKVFSRKRAESWASVRDEVDKMVRS---VSCNVGKPINVGEQIFALTRNITY 189          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.970e-18
Identity = 53/144 (36.81%), Postives = 80/144 (55.56%), Query Frame = 1
Query:  193 VIGNFHQLGEL-PHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFALTGSIV 621
            VIGN  QL +L P +     +KKYGP++  ++G   +VVISSAE A+++LK  D++   RPP  G    +Y   D+A + Y+ Y+RE+RK+ +  +FS  RV +F  +REEE   +M+               E M   T S+V
Sbjct:   39 VIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVV 182          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.388e-18
Identity = 52/116 (44.83%), Postives = 70/116 (60.34%), Query Frame = 1
Query:  199 GNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIRE-EEVALLMN 543
            G  H L   P  +L  L+ KYGPVM L+ G+V  VVISS  AA++VL+  D+   SRP L+ S  F Y   DI F+PY  YWR LRK+  +E+ S + V+    IR+ E +AL+ N
Sbjct:   47 GLLHLLRSQPQVALRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSLLVSEIFCYGNLDIGFAPYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGETLALVRN 162          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 4.388e-18
Identity = 46/114 (40.35%), Postives = 70/114 (61.40%), Query Frame = 1
Query:  199 GNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLM 540
            G  H L   P  +L +L+ KYGPVM L++G++  VV+SS  AA++VL+  D+   SRP L+ S  F Y+  D+ F+PY  YWR LRK+  +E+ S + V+    +R +E   L+
Sbjct:   71 GLLHLLRSHPQVALRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASRPSLLVSEIFCYDNLDVGFAPYGAYWRMLRKLCTVELLSTKVVRQLAPVRNDETLTLV 184          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.178e-17
Identity = 43/116 (37.07%), Postives = 70/116 (60.34%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLM 540
            V+G    LG +PH +L  ++KKYGPVM LK+G   L V S+ EAA+  LK  D++  +RPP  G+    YN  D+ F+ Y   W+ LRK+S + +   + +Q +  +R++E+  ++
Sbjct:   46 VLGALRLLGTMPHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYML 161          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.844e-17
Identity = 43/116 (37.07%), Postives = 71/116 (61.21%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLM 540
            VIG    LG +PH +L +++KKYGP+M LK+G   +VV S+  AA+  LK  D++  +RPP  G+    YN  D+ F+PY   W+ LRK+S L +   + ++++  +R  E+  ++
Sbjct:   45 VIGALPLLGGMPHVALAKMAKKYGPIMYLKVGTCGMVVASTPNAAKAFLKTLDINFSNRPPNAGATHMAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHML 160          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.715e-17
Identity = 43/116 (37.07%), Postives = 70/116 (60.34%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLM 540
            V+G    LG +PH +L  ++KKYGPVM LK+G   L V S+ EAA+  LK  D++  +RPP  G+    YN  D+ F+ Y   W+ LRK+S + +   + +Q +  +R++E+  ++
Sbjct:   46 VLGALPLLGTMPHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYML 161          
The following BLAST results are available for this feature:
BLAST of DR403250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
C71AR_ARATH3.247e-2134.97Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C7D94_MENGR9.446e-2147.46Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C83B1_ARATH6.123e-2036.81Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C84A1_ARATH1.508e-1834.03Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C83A1_ARATH1.970e-1836.81Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C99A3_ORYSJ4.388e-1844.83Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C99A2_ORYSJ4.388e-1840.35Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C75A7_EUSGR2.178e-1737.07Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C75A2_SOLME2.844e-1737.07Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C75A5_EUSGR3.715e-1737.07Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244F10 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403250 ID=DR403250; Name=DR403250; organism=Citrus sinensis; type=EST; length=624bp
GGGGAAGCTCATTCGTTCTAAATGTTACTTATTAGCTAAATAAATANNNG
AATGNNNNNCACGTTTTCTCCCCAAACAGTATTACCCATGTGGATGTGGC
TCCCTCTTCTCCTCATCCCGCTGCTGCTCATCTTGAAAAAGCTGAAAGCA
CAAAACAAGCAGCAGCTTCCACCAAGCCCACCTAAGCTTCCAGTAATAGG
CAATTTTCACCAACTTGGAGAGTTGCCTCACCAATCTTTGTGGCAACTCT
CTAAAAAATACGGCCCCGTTATGCTCCTCAAACTTGGTCGTGTGCCTCTT
GTCGTAATCTCCTCGGCTGAGGCAGCAAGGGATGTATTAAAAGTTCATGA
TCTCGATCGTTGCAGCAGACCACCATTAATAGGCAGTGGGAAGTTTACGT
ACAACTATTCGGATATAGCTTTTTCACCATATAGCGATTACTGGAGGGAG
TTGCGGAAAATAAGTGTCCTCGAGGTATTCAGCTTGAGAAGAGTGCAGTC
ATTTGGATTCATCAGGGAAGAGGAAGTTGCCCTGCTTATGAATTCAATCT
CTGAATCATCATCCTCCGCCTCCCCTGTTGATCTTTCTGAGAAGATGTTT
GCTCTCACTGGAAGTATAGTTTTC
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