DR403250

Overview
NameDR403250
Unique NameDR403250
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.851e-17
Identity = 46/119 (38.66%), Postives = 70/119 (58.82%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGP--VMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMN 543
            ++G+ H +G   H SL +L  KYG    + L+ G VP +++SS  AA  V++ HD    SRP  + S    YN  D+AFSP  +YW++ RK+    + S ++V SF   REEEV L+++
Sbjct:   66 IVGHLHHIGPQTHISLQELVAKYGHNGFLFLRAGAVPTLIVSSPSAAEAVMRTHDHICASRPWSMASHILRYNTCDVAFSPLGEYWQQTRKLMNTHLLSNKKVYSFRHGREEEVCLVVD 184          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.081e-16
Identity = 45/146 (30.82%), Postives = 82/146 (56.16%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRP-PLIGSGKFTYNYSD--IAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFALTGSIV 621
            +IG+ H +  +PHQ  ++LS ++GP+M L LG VP VV S+AEAA++ LK H+++  +RP   +      Y+  D   AF+P+  YW+ ++K+ + E+ S R +  F  +R++E    ++               +++  L+ +IV
Sbjct:   38 IIGHLHLVSPIPHQDFYKLSTRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVKGLAYDSQDFLFAFAPFGPYWKFMKKLCMSELLSGRMMDQFLPVRQQETKRFISRVFRKGVAGEAVDFGDELMTLSNNIV 183          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.844e-16
Identity = 47/118 (39.83%), Postives = 70/118 (59.32%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYN-YSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMN 543
            +IGN H +G  PH S   LSK YGP+M LK G +  VV++S EAAR+VL+ +D    SR P        ++  S +   P S  WR LRK+S  ++FS +R+++   +RE +V  L++
Sbjct:   47 IIGNIHLVGRNPHHSFADLSKTYGPIMSLKFGSLNTVVVTSPEAAREVLRTYDQILSSRTPTNSIRSINHDKVSVVWLPPSSSRWRLLRKLSATQLFSPQRIEATKTLRENKVKELVS 164          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.844e-16
Identity = 47/118 (39.83%), Postives = 73/118 (61.86%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSD-YWRELRKISVLEVFSLRRVQSFGFIREEEVALLMN 543
            +IGN H +G+ PH+S  +LSK YGPVM LKLG +  VVI+S EAAR+VL+ HD    +R P        +  + + + P S   WR LR++SV ++ S +R+++   +R  +V  L++
Sbjct:   47 IIGNIHLVGKHPHRSFAELSKTYGPVMSLKLGSLNTVVIASPEAAREVLRTHDQILSARSPTNAVRSINHQDASLVWLPSSSARWRLLRRLSVTQLLSPQRIEATKALRMNKVKELVS 164          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.844e-16
Identity = 46/113 (40.71%), Postives = 71/113 (62.83%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGP-VMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEV 528
            +IG+ H +G++P+ SL  L+ +YGP +MLL+LG VP VV+SS   A  VL+ +D    SRP  + S    Y  +D  F+PY D++R+ RK+  + + +  +V+S    REEEV
Sbjct:   77 IIGHLHLMGDIPYVSLAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEEV 189          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.408e-16
Identity = 47/143 (32.87%), Postives = 74/143 (51.75%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFALTGSIV 621
            +IG+ H LG L HQS   LS +YGP+  L  G V  VV S+   A+ +L+ ++L    R       K TY  S +AF+PY DYWR ++K+S+ E+   R + +F  +R +E   L+                E++  LT +++
Sbjct:   42 IIGHMHMLGPLLHQSFHNLSHRYGPLFSLNFGSVLCVVASTPHFAKQLLQTNELAFNCRIESTAVKKLTYE-SSLAFAPYGDYWRFIKKLSMNELLGSRSINNFQHLRAQETHQLLRLLSNRARAFEAVNITEELLKLTNNVI 183          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.408e-16
Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGP--VMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLM 540
            +IG+ H +G  PH S   L  KYG   +ML+++G VP +V+S+ +AA  VL+ HD    SRP    +    YN +D+AF+PY  YWR  RK+    + S + V S    REEEV L++
Sbjct:   65 IIGHLHLIGSHPHVSFRDLHAKYGHNGLMLVQVGAVPTIVVSTPQAAEAVLRTHDHVLASRPRNPVADIIRYNSTDVAFAPYGVYWRTARKVVNTHLLSAKMVFSKRREREEEVRLVV 182          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.145e-16
Identity = 42/112 (37.50%), Postives = 65/112 (58.04%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPP-LIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEE 525
            +IG+ H L   PHQ   +LS +YGP++ L LG VP VV S+AEAA++ LK H+    +RP   +     TY + D  F+PY  YW+ ++K+ + E+     +  F  +R+ E
Sbjct:   40 IIGHLHLLSPTPHQDFHKLSLRYGPIIHLFLGSVPCVVASTAEAAKEFLKTHEPAFSNRPANTVAVETLTYGFQDFLFAPYGPYWKFMKKLCMSELLGGHMLDQFLPVRQXE 151          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.145e-16
Identity = 47/119 (39.50%), Postives = 71/119 (59.66%), Query Frame = 1
Query:  193 VIGNFHQLGELPHQSLWQLSKKYGP--VMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMN 543
            +IG+ H +G   H S+  L  K+G   ++LL++G VP + +SS  AA  VL+  D    SRPP + +    Y  SD+AF PY +Y R+ RK+    + S ++VQSF   R+EEV L+M+
Sbjct:   68 IIGHLHLIGAETHISIRDLDAKHGRNGLLLLRIGAVPTLFVSSPSAADAVLRTQDHIFASRPPWMAAEIIRYGPSDVAFVPYGEYGRQGRKLLTTHMLSTKKVQSFRHGRQEEVRLVMD 186          
BLAST of DR403250 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.107e-16
Identity = 46/117 (39.32%), Postives = 69/117 (58.97%), Query Frame = 1
Query:  193 VIGNF-HQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDRCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLM 540
            +IGN  H     PH +L  L+ K+GPVM L+LG+V  VVISS  AA++VL+  D    SRP L+ +    Y   D++F+PY   WR LRK+ + E+ +  +V+    +R+ E   L+
Sbjct:   36 LIGNLLHLATSQPHVALRDLAMKHGPVMYLRLGQVDAVVISSPAAAQEVLRDKDTTFASRPSLLVADIILYGSMDMSFAPYGGNWRMLRKLCMSELLNTHKVRQLAAVRDSETLSLV 152          
The following BLAST results are available for this feature:
BLAST of DR403250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
C71C3_MAIZE4.851e-1738.66Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C93A1_SOYBN1.081e-1630.82Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C76C2_ARATH1.844e-1639.83Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C76C1_ARATH1.844e-1639.83Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C71C4_MAIZE1.844e-1640.71Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C93B1_GLYEC2.408e-1632.87Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C71C1_MAIZE2.408e-1640.68Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C93A3_SOYBN3.145e-1637.50Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C71C2_MAIZE3.145e-1639.50Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C99A1_SORBI4.107e-1639.32Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244F10 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403250 ID=DR403250; Name=DR403250; organism=Citrus sinensis; type=EST; length=624bp
GGGGAAGCTCATTCGTTCTAAATGTTACTTATTAGCTAAATAAATANNNG
AATGNNNNNCACGTTTTCTCCCCAAACAGTATTACCCATGTGGATGTGGC
TCCCTCTTCTCCTCATCCCGCTGCTGCTCATCTTGAAAAAGCTGAAAGCA
CAAAACAAGCAGCAGCTTCCACCAAGCCCACCTAAGCTTCCAGTAATAGG
CAATTTTCACCAACTTGGAGAGTTGCCTCACCAATCTTTGTGGCAACTCT
CTAAAAAATACGGCCCCGTTATGCTCCTCAAACTTGGTCGTGTGCCTCTT
GTCGTAATCTCCTCGGCTGAGGCAGCAAGGGATGTATTAAAAGTTCATGA
TCTCGATCGTTGCAGCAGACCACCATTAATAGGCAGTGGGAAGTTTACGT
ACAACTATTCGGATATAGCTTTTTCACCATATAGCGATTACTGGAGGGAG
TTGCGGAAAATAAGTGTCCTCGAGGTATTCAGCTTGAGAAGAGTGCAGTC
ATTTGGATTCATCAGGGAAGAGGAAGTTGCCCTGCTTATGAATTCAATCT
CTGAATCATCATCCTCCGCCTCCCCTGTTGATCTTTCTGAGAAGATGTTT
GCTCTCACTGGAAGTATAGTTTTC
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