DR403236
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403236 vs. ExPASy Swiss-Prot
Match: UBC18_ARATH (Probable ubiquitin carrier protein E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.015e-16 Identity = 44/114 (38.60%), Postives = 66/114 (57.89%), Query Frame = 3 Query: 72 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 410 S++A R+ KEL + Q +PP V D++ W + G + +A + + + FP YP + P+V F HP+I SNG ICLDIL + WSPA+T+S V +SI S+L+ Sbjct: 13 SKIACNRLQKELSEWQVNPPTGFKHR-VTDNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 125
BLAST of DR403236 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.015e-16 Identity = 43/114 (37.72%), Postives = 67/114 (58.77%), Query Frame = 3 Query: 72 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 410 S++A R+ KEL + Q +PP V D++ W + G + +A + + + FP YP + P+V F + HP+I SNG ICLDIL + WSPA+T++ V +SI S+L+ Sbjct: 13 SKIACNRLQKELSEWQLNPPTGFRH-KVTDNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLS 125
BLAST of DR403236 vs. ExPASy Swiss-Prot
Match: UBC12_SCHPO (NEDD8-conjugating enzyme ubc12 OS=Schizosaccharomyces pombe GN=ubc12 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.631e-16 Identity = 45/140 (32.14%), Postives = 74/140 (52.86%), Query Frame = 3 Query: 81 ASKRINKELKDLQKDPPASCS-AGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARS 497 A RI K++ DL+ S S P+ ++ H + + P + + GG F I +YP PPKV K++HPNI+ G++CL+IL++ W+P L ++ +L+ + L PN +DPL E A D + + R+ Sbjct: 24 AQIRIQKDVTDLEIPSTMSTSWPDPIKLNVLHLE---IRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNLNSILVGLQFLFLSPNAEDPLNKEAAADLHKDPQGFASRVRT 160
BLAST of DR403236 vs. ExPASy Swiss-Prot
Match: UBE2W_DICDI (Probable ubiquitin-conjugating enzyme E2 W OS=Dictyostelium discoideum GN=ube2w PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.437e-16 Identity = 47/110 (42.73%), Postives = 63/110 (57.27%), Query Frame = 3 Query: 84 SKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF-RTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 410 +KR+ KEL DL+ +PP C + D++ W + G S + G F + F YP P+V F T HP+I SNG ICL IL + WSPALT+S V LSI S+L+ Sbjct: 6 AKRLQKELLDLKTNPPP-CISITEGDNLDKWVIAVDGTEGSIYQGEHFKLQFKFSSGYPLDSPEVIFIGTPPIHPHIYSNGHICLSILYDNWSPALTVSSVCLSILSMLS 114
BLAST of DR403236 vs. ExPASy Swiss-Prot
Match: UBC3_YEAST (Ubiquitin-conjugating enzyme E2-34 kDa OS=Saccharomyces cerevisiae GN=CDC34 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.656e-16 Identity = 47/141 (33.33%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 99 KELKDLQKDPPASCSAGPVADDMFHWQATIMGPS-DSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 482 +EL D +K P+ ++F W +M + DS + GG F + FP D+PF PP+ F ++HPN+ +G +C+ IL E WSP T+ VL+SI SLL DPN + P + A Y+ + +Y+ Sbjct: 17 RELTDPKKAIPSFHIELEDDSNIFTWNIGVMVLNEDSIYHGGFFKAQMRFPEDFPFSPPQFRFTPAIYHPNVYRDGRLCISILHQSGDPMTDEPDAETWSPVQTVESVLISIVSLLEDPNINSPANVDAAVDYRKNPEQYK 157
BLAST of DR403236 vs. ExPASy Swiss-Prot
Match: UBC12_YEAST (NEDD8-conjugating enzyme UBC12 OS=Saccharomyces cerevisiae GN=UBC12 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.656e-16 Identity = 43/133 (32.33%), Postives = 69/133 (51.88%), Query Frame = 3 Query: 69 NSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQA----TIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM 455 N A R+ ++L L P + + D Q+ I+ P + + G ++ F YP +PPKV K+FHPNI+ G++CL+IL+E WSPAL + ++ + L +PNP+DPL + A + Sbjct: 24 NLSAARIRLKRDLDSLDLPPTVTLNVITSPDSADRSQSPKLEVIVRPDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKL 156
BLAST of DR403236 vs. ExPASy Swiss-Prot
Match: UBE2F_RAT (NEDD8-conjugating enzyme UBE2F OS=Rattus norvegicus GN=Ube2f PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.706e-15 Identity = 48/157 (30.57%), Postives = 73/157 (46.50%), Query Frame = 3 Query: 66 RNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 515 R + K + KE+ +L+ + P +C + H + P + + GG F P Y PPKV TK++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + D+ + + ++YA Sbjct: 28 RRVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTVSPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRDKVDEYIKRYA 184
BLAST of DR403236 vs. ExPASy Swiss-Prot
Match: UBC17_ARATH (Probable ubiquitin carrier protein E2 17 OS=Arabidopsis thaliana GN=UBC17 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.706e-15 Identity = 40/114 (35.09%), Postives = 68/114 (59.65%), Query Frame = 3 Query: 72 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 410 +++A+ R+ KE + Q +PP+ V+D++ W + G + +A + + + FP YP + P+V F+ HP+I SNG ICLD+L + WSPA+ +S + LSI S+L+ Sbjct: 13 TKIATNRLQKEFMEWQTNPPSGFKHR-VSDNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSMLS 125
BLAST of DR403236 vs. ExPASy Swiss-Prot
Match: UBC12_ASHGO (NEDD8-conjugating enzyme UBC12 OS=Ashbya gossypii GN=UBC12 PE=3 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.706e-15 Identity = 36/103 (34.95%), Postives = 59/103 (57.28%), Query Frame = 3 Query: 189 MGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARS 497 + P + + GG F S+ F YP +PP V ++HPNI+ +G+ICL++L+E WSP + + V+L + L +PN DPL + A D ++ET ++ Sbjct: 65 ISPEEGVYRGGHFRFSVVFRDTYPIEPPTVKCLNTIYHPNIDYSGNICLNVLREDWSPVMDLQTVVLGLLFLFLEPNGSDPLNRQAADTMLRDPYRFETNVQA 167
BLAST of DR403236 vs. ExPASy Swiss-Prot
Match: UB2FA_MOUSE (NEDD8-conjugating enzyme UBE2F OS=Mus musculus GN=Ube2f PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.706e-15 Identity = 48/157 (30.57%), Postives = 73/157 (46.50%), Query Frame = 3 Query: 66 RNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 515 R + K + KE+ +L+ + P +C + H + P + + GG F P Y PPKV TK++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + D+ + + ++YA Sbjct: 28 RRVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTVSPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRDKVDEYIKRYA 184 The following BLAST results are available for this feature:
BLAST of DR403236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403236 ID=DR403236; Name=DR403236; organism=Citrus sinensis; type=EST; length=576bpback to top |