DR403213
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403213 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.774e-27 Identity = 88/268 (32.84%), Postives = 130/268 (48.51%), Query Frame = 2 Query: 8 MGRGMVELKRIENKIXXQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-SSSMVKTLERYQKCNYGAPEPNVSAREALELSSQQ----EYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAG-------------LQLM--------EGYQVNTLQLNP------SAEDCGYGLKPAQPQ------GDSFFHALECEPTLQI 697 MGRG +E+KRIEN QVTF+KRR GLLKKA EL+VLCDA V ++IFS+ GK++E+CS + S+ + +E YQ V+ E++ Q E +++ E L R G++L L ++ LE+QL+ S+ ++R+ + Q + L L+ KE +L + N L + H A G L ++ E LQL P +A G+ L+P QP S FHA LQ+ Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQ---------TVTNTHFEEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQNSFLCRMINENHHQAAVGGGDVKAMVEMAPVLSMLTAAPAYYGEESSSTALQLTPPLHAVDAAAAAGFRLQPTQPNLQDPGCSSSSFHAAAAGHGLQL 259
BLAST of DR403213 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.774e-27 Identity = 68/173 (39.31%), Postives = 104/173 (60.12%), Query Frame = 2 Query: 8 MGRGMVELKRIENKIXXQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGP-LNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 523 M RG V+L+RIEN + QVTF KRR GLLKKA ELS+LC+A++ +IIFS GKLY+ ++ +M + +ERY+ A +A + +QE + LK LQ+ R + G + +EL +LER L++ + IRS + Q M+ + L+ KE +L AN+ L+++ Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYK----SASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEK 169
BLAST of DR403213 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica GN=MADS26 PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 3.774e-27 Identity = 68/173 (39.31%), Postives = 104/173 (60.12%), Query Frame = 2 Query: 8 MGRGMVELKRIENKIXXQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGP-LNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR 523 M RG V+L+RIEN + QVTF KRR GLLKKA ELS+LC+A++ +IIFS GKLY+ ++ +M + +ERY+ A +A + +QE + LK LQ+ R + G + +EL +LER L++ + IRS + Q M+ + L+ KE +L AN+ L+++ Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYK----SASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEK 169
BLAST of DR403213 vs. ExPASy Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.434e-26 Identity = 71/176 (40.34%), Postives = 104/176 (59.09%), Query Frame = 2 Query: 8 MGRGMVELKRIENKIXXQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTL 535 M R +++K+I+N QVTF+KRR GL KKA ELSVLCDA+VALIIFS+ GKL+++ SSSSM + LER + + + + E L+L Y +L R + GEEL LN +EL+ LER L+ L ++ + ++ + +LQ K L E N+ L+Q+ M + Sbjct: 1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDY-SSSSMKQILERRDLHSKNLEKLDQPSLE-LQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLNIEELQQLERSLETGLSRVIERKGDKIMREINQLQQKGMHLMEENEKLRQQVMEI 174
BLAST of DR403213 vs. ExPASy Swiss-Prot
Match: DEF21_ANTMA (MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.446e-26 Identity = 66/171 (38.60%), Postives = 105/171 (61.40%), Query Frame = 2 Query: 8 MGRGMVELKRIENKIXXQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS-SMVKTLERYQKCNYGAPE-PNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTL 514 MGRG +E+KRIEN QVTF+KRR+GL+KK +ELSVLCDA++ LI+FS +GKL E+C+ SM + ++RY K PE N + A +E ++K LQ + + G++L + +EL LE+ LD SL ++R+ + + + + + L+ E +L + N+ + Sbjct: 1 MGRGKIEVKRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPPFSMKQIIDRYVKAKGILPEMENRAGPHADNDQVIKELTRMKEETLNLQLNLQRYKGDDLSTVRFEELTELEKLLDQSLNKVRARKLELLHEQMENLKRTEFMLEKENQEM 171
BLAST of DR403213 vs. ExPASy Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.071e-25 Identity = 72/188 (38.30%), Postives = 109/188 (57.98%), Query Frame = 2 Query: 8 MGRGMVELKRIENKIXXQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-SSSMVKTLERYQKCN----YGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAG 556 MGRG +E+KRIEN QVT++KRRNG++KKA E++VLCDA+V+LIIF N GK++E+CS S+++ L+ YQK + + A N+S E ++K + +Q R+L GE++ LN KEL LE L L I + ++ + L ++ +Q+L E +K L+ AA G Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQKTSGRRLWDAKHENLS----------NEIDRIKKENDNMQVKLRHLKGEDINSLNHKELMVLEEGLTNGLSSISAKQS----EILRMVRKNDQILEEEHKQLQYALHQKEMAAMGG 174
BLAST of DR403213 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 6.025e-25 Identity = 79/215 (36.74%), Postives = 118/215 (54.88%), Query Frame = 2 Query: 8 MGRGMVELKRIENKIXXQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTL-ERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLS-EANKTLKQRTMTLRHAAFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQP 646 MGRG +E+KRIEN QVT++KRR G++KKA EL+VLCDA+VA+I+FS+ GK +EFCS S+ +K + +RYQ+ S + Q+ LK L+ R +GE+L L EL LE+ +D +LK++R R +++ T TE K+ S EA +TL+Q AF + G +A+ + + P+QP Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQA------IGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGLEFDELRGLEQNVDAALKEVRH-RKYHVITTQTETYKKKVKHSYEAYETLQQELGLREEPAFGFVDNTGGGWDGGAGAGAAADMFAFRVVPSQP 208
BLAST of DR403213 vs. ExPASy Swiss-Prot
Match: FBP1_PETHY (Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.028e-24 Identity = 69/174 (39.66%), Postives = 105/174 (60.34%), Query Frame = 2 Query: 8 MGRGMVELKRIENKIXXQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALELSSQ---QEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQ 520 MGRG +E+KRIEN QVT++KRRNG+LKKA E+SVLCDA V++IIF++ GK++EF SS+S+V L++Y K ++ R L+ + E K+K + +Q R+L GE++ LN +EL LE L+ L IR+ + + + + Q E+ + N L+Q Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEF-SSTSLVDILDQYHK---------LTGRRLLDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMILEDALENGLTSIRNKQNEVLRMMRKKTQSMEEEQDQLNCQLRQ 164
BLAST of DR403213 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24 Identity = 70/180 (38.89%), Postives = 105/180 (58.33%), Query Frame = 2 Query: 8 MGRGMVELKRIENKIXXQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALELS-SQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHA 544 M R E+KRIE+ QVTF+KRR GL KKA ELSVLCDA+VALI+FS+ GKL F +SSSM + +++Y N + + + +L+L+ +Y L + R + GEEL L+ EL+ LE+ L+ L ++ T+ Q ++ ++ELQ K L+E N L+ + + A Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHF-ASSSMNEIIDKY---NTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQISPA 176
BLAST of DR403213 vs. ExPASy Swiss-Prot
Match: GLOB_TOBAC (Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.342e-24 Identity = 69/171 (40.35%), Postives = 101/171 (59.06%), Query Frame = 2 Query: 8 MGRGMVELKRIENKIXXQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQ 520 MGRG +E+KRIEN QVT++KRRNG+LKKA E+SVLCDA V++IIF++ GK++EF SS+S+V L++Y K +A + E K+K + +Q R+L GE++ LN +EL LE LD L IR+ + + + Q E+ + N L+Q Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEF-SSTSLVDILDQYHKLT------GRRLWDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMMLEDALDNGLTSIRNKQNDLLRMMRKKTQSMEEEQDQLNWQLRQ 164 The following BLAST results are available for this feature:
BLAST of DR403213 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403213 ID=DR403213; Name=DR403213; organism=Citrus sinensis; type=EST; length=701bpback to top |