DR403177
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403177 vs. ExPASy Swiss-Prot
Match: RS11_THEON (30S ribosomal protein S11P OS=Thermococcus onnurineus (strain NA1) GN=rps11p PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.910e-30 Identity = 63/113 (55.75%), Postives = 84/113 (74.34%), Query Frame = 3 Query: 150 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 488 +GVAHI++S+N+T IH+TDL+G ET+ R +GGM VKADRDE SPYAAM+AA+ ++ E G +HIK+RA AQ+A+RALAR+G++IGR+EDVTPIP D T Sbjct: 16 WGVAHIYSSYNNTIIHITDLTGAETVSRWSGGMVVKADRDEPSPYAAMIAAKRAAEEAMEKGFVGVHIKVRAPGGSKSKTPGPGAQAAIRALARAGLRIGRVEDVTPIPHDGT 128
BLAST of DR403177 vs. ExPASy Swiss-Prot
Match: RS11_THEGJ (30S ribosomal protein S11P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps11p PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.008e-29 Identity = 62/113 (54.87%), Postives = 84/113 (74.34%), Query Frame = 3 Query: 150 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 488 +GVAHI++S+N+T IH+TD++G ET+ R +GGM VKADRDE SPYAAM+AA+ ++ E G +HIK+RA AQ+A+RALAR+G++IGR+EDVTPIP D T Sbjct: 15 WGVAHIYSSYNNTIIHITDITGAETVSRWSGGMVVKADRDEPSPYAAMIAARRAAEEAMEKGFVGVHIKVRAPGGSKSKSPGPGAQAAIRALARAGLRIGRVEDVTPIPHDGT 127
BLAST of DR403177 vs. ExPASy Swiss-Prot
Match: RS11_METB6 (30S ribosomal protein S11P OS=Methanoregula boonei (strain 6A8) GN=rps11p PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.246e-29 Identity = 65/112 (58.04%), Postives = 83/112 (74.11%), Query Frame = 3 Query: 150 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 485 +G+AHIFASFN+T I VTDLSG ET+ + +GGM VK DR+ESSPYAAM A +V+ +E GI +H+K+RA AQ+A+RALAR+GM+IGRIEDVTP+P DS Sbjct: 9 WGIAHIFASFNNTIITVTDLSGAETVTKSSGGMVVKQDRNESSPYAAMQMAANVAAIAREKGIVGVHVKVRAPGQGKQRSPGPGAQAAIRALARAGMRIGRIEDVTPVPHDS 120
BLAST of DR403177 vs. ExPASy Swiss-Prot
Match: RS11_METLZ (30S ribosomal protein S11P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps11p PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.933e-29 Identity = 65/112 (58.04%), Postives = 84/112 (75.00%), Query Frame = 3 Query: 150 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDS 485 +G+AHIFASFN+T I VTDLSG ET+ + +GGM VK R+ESSPYAAM A +++Q K+ GIT LHI++RA AQ+A+RAL+R+GM+IGRIEDVTP+P DS Sbjct: 8 WGIAHIFASFNNTIITVTDLSGAETICKSSGGMVVKQARNESSPYAAMQMAINIAQASKDKGITGLHIRVRAPGNGRQRSPGPGAQAAIRALSRAGMRIGRIEDVTPVPHDS 119
BLAST of DR403177 vs. ExPASy Swiss-Prot
Match: RS11_STAMF (30S ribosomal protein S11P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps11p PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.830e-29 Identity = 65/113 (57.52%), Postives = 83/113 (73.45%), Query Frame = 3 Query: 150 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 488 +GVAHI++S N+T IH+TDL+G ET+ R +GGM VKADR++ SPYAAM+AA + + GITALHIK+RA AQ+A+RALAR+G IGRIEDVTPIP D+T Sbjct: 10 WGVAHIYSSLNNTIIHITDLTGAETVSRWSGGMVVKADREKPSPYAAMIAASRAAAEAMDKGITALHIKVRAPGGHGPKTPGPGAQAAIRALARAGFIIGRIEDVTPIPHDTT 122
BLAST of DR403177 vs. ExPASy Swiss-Prot
Match: RS11_METTP (30S ribosomal protein S11P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps11p PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.456e-28 Identity = 62/116 (53.45%), Postives = 83/116 (71.55%), Query Frame = 3 Query: 141 EHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 488 E + +AHI++SFN+T I +TDL+G ET+ +I+GGM VKA RDESSPY AM A V+++ K GI +H+K+RA AQ+A+RALAR+G++IGRIEDVTPIP D T Sbjct: 3 EGKWAIAHIYSSFNNTLITITDLTGAETIAKISGGMVVKAARDESSPYTAMQMAMQVAEQAKAKGIVGVHVKVRAPGGNKQRSPGPGAQAAIRALARAGLRIGRIEDVTPIPHDGT 118
BLAST of DR403177 vs. ExPASy Swiss-Prot
Match: RS14_ENCCU (40S ribosomal protein S14 OS=Encephalitozoon cuniculi GN=RPS14 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.243e-28 Identity = 60/109 (55.05%), Postives = 78/109 (71.56%), Query Frame = 3 Query: 156 VAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTD 482 VAHI A+ NDTF+H+TD++G ET+ +ITGGM+VKA RDE SPYAAMLAAQDV+ + G+ LH KLR AQ+A+R L R+G+++GRIEDVTP+ D Sbjct: 13 VAHIKATKNDTFVHITDMTGSETIAKITGGMRVKAQRDEGSPYAAMLAAQDVATKILGRGVKVLHFKLRGAGGVKPMALGPGAQTAIRTLIRAGLRVGRIEDVTPVARD 121
BLAST of DR403177 vs. ExPASy Swiss-Prot
Match: RS11_META3 (30S ribosomal protein S11P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps11p PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.243e-28 Identity = 62/113 (54.87%), Postives = 81/113 (71.68%), Query Frame = 3 Query: 150 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 488 +GV HI+AS+N+T IHVTD++G ET+ +I+GGM VK +DESSPYAAM A ++ +E GI +HIK+RA AQ+A+RALAR+G+KIGRIED TPIP D T Sbjct: 5 WGVIHIYASYNNTIIHVTDITGAETIAKISGGMIVKNQKDESSPYAAMQGAFKIADMIREKGIDKVHIKVRATGGSKSKNPGPGAQAAIRALARAGIKIGRIEDATPIPHDGT 117
BLAST of DR403177 vs. ExPASy Swiss-Prot
Match: RS11_UNCMA (30S ribosomal protein S11P OS=Uncultured methanogenic archaeon RC-I GN=rps11p PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.235e-28 Identity = 62/113 (54.87%), Postives = 83/113 (73.45%), Query Frame = 3 Query: 150 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 488 + +AHIF+SFN+T I VTDL+G ETL + +GGM VK DR+ESSPYAAM A +V+++ K GI +HI++RA AQ+A+R+LAR+G++IGRIEDVTPIP D T Sbjct: 9 WAIAHIFSSFNNTIITVTDLTGAETLAKTSGGMVVKQDRNESSPYAAMQMAMNVAEQIKAKGIQGVHIRVRAPGGNHQRSPGPGAQAAIRSLARAGLRIGRIEDVTPIPHDGT 121
BLAST of DR403177 vs. ExPASy Swiss-Prot
Match: RS11_ARCFU (30S ribosomal protein S11P OS=Archaeoglobus fulgidus GN=rps11p PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.531e-28 Identity = 61/113 (53.98%), Postives = 81/113 (71.68%), Query Frame = 3 Query: 150 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 488 +G+AHI++S+N+T I +TD++G E + R++GGM VKADRDE +PY AM AA + KE GI +HIK+RA AQ+A+RALAR+G+KIGRIEDVTPIP D T Sbjct: 10 WGIAHIYSSYNNTIITITDITGAEIIARVSGGMIVKADRDEGNPYTAMQAALRAAAIAKEKGIDGVHIKVRAPGGNKHTTPGPGAQAAIRALARAGLKIGRIEDVTPIPHDGT 122 The following BLAST results are available for this feature:
BLAST of DR403177 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403177 ID=DR403177; Name=DR403177; organism=Citrus sinensis; type=EST; length=683bpback to top |