DN621643

Overview
NameDN621643
Unique NameDN621643
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.330e-22
Identity = 60/154 (38.96%), Postives = 87/154 (56.49%), Query Frame = -3
Query:  284 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR--PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 736
            GGLPS A+E I   GGL  E+ YPY  K+  C   ++ V V +  SVN+T   +DE + A  L     +SV    +   +FY+ G+        +   ++HAV+ VGYGV E   P+W++KNSWG  WG++GYF+M  G   CGI T A+  ++
Sbjct:  169 GGLPSNAYESIIKMGGLMLEDNYPYDAKNEKCHLKTDGVAVYINSSVNLT---QDETELAAWLYHNSTISVGMNALL-LQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGENGYFRMYRGDGSCGINTVATSAMI 318          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.043e-22
Identity = 54/142 (38.03%), Postives = 80/142 (56.34%), Query Frame = -3
Query:  311 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 736
            GGL   AFE I   GG+  E  YPY   +  C+ ++    VQV D        E++L+  + LV P+ +A +  D    YK G+     C N+ +  NHAV+ VGYGVE+ +PYW  KN+WG +WG+ G+F+++   N CG+
Sbjct:  176 GGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVN-YKQGIIKY--CFNSGL--NHAVLLVGYGVENNIPYWTFKNTWGTDWGEEGFFRVQQNINACGM 312          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.043e-22
Identity = 54/142 (38.03%), Postives = 80/142 (56.34%), Query Frame = -3
Query:  311 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 736
            GGL   AFE +   GG+  E  YPY   +G C+ ++    V+V          E++L+  +  V P+ VA +  D    YK G+     C N  +  NHAV+ VGY VE+GVP+W++KN+WG +WG+ GYF+++   N CGI
Sbjct:  177 GGLLHTAFEAVMNMGGIQAESDYPYEANNGDCRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAIDASDIVN-YKRGIMKY--CANHGL--NHAVLLVGYAVENGVPFWILKNTWGADWGEQGYFRVQQNINACGI 313          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATV_NPVBM (Viral cathepsin OS=Bombyx mori nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.043e-22
Identity = 54/142 (38.03%), Postives = 81/142 (57.04%), Query Frame = -3
Query:  311 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 736
            GGL   AFE I   GG+  E  YPY   +  C+ +S    VQV D     +  E++L+  + LV P+ +A +  D    YK G+     C ++ +  NHAV+ VGYGVE+ +PYW  KN+WG +WG+ G+F+++   N CG+
Sbjct:  176 GGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNSNKFLVQVKDCYRYIIVYEEKLKDLLPLVGPIPMAIDAADIVN-YKQGIIKY--CFDSGL--NHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGM 312          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.190e-22
Identity = 62/156 (39.74%), Postives = 84/156 (53.85%), Query Frame = -3
Query:  296 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDG-VCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGF-RFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP-------YWLIKNSWGENWGDHGYFKMEMGKNMCGIATCAS 736
            GGL + AFEY    GGL  EE YPYTGKDG  CK     +   V    N ++ + DE Q A  LV+   +A  +  G+ + Y  GV     C      +NH V+ VGYG     P       YW+IKNSWGE WG++G++K+  G+N+CG+ +  S
Sbjct:  208 GGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKLDKSKIVASVS---NFSVISIDEEQIAANLVKNGPLAVAINAGYMQTYIGGVSCPYICTRR---LNHGVLLVGYGAAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSMVS 357          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.778e-22
Identity = 55/142 (38.73%), Postives = 76/142 (53.52%), Query Frame = -3
Query:  311 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 736
            GGL   AFE I   GG+  E  YPY   +  C+       V V          E++L+  + L  P+ VA +  D    Y+ G+     C N  +  NHAV+ VGYGVE+ VPYW++KNSWG +WG+ G+FK++   N CGI
Sbjct:  176 GGLLHTAFEAIISMGGVQIENDYPYESSNNYCRMDPTKFVVGVKQCNRYITIYEEKLKDVLRLAGPIPVAIDASDILN-YEQGIIKY--CANNGL--NHAVLLVGYGVENNVPYWILKNSWGTDWGEQGFFKIQQNVNACGI 312          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 8.852e-22
Identity = 60/155 (38.71%), Postives = 87/155 (56.13%), Query Frame = -3
Query:  290 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSS-ENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYP 736
            GGL   AFEYI  NGGL  EE YPY+ ++G C+    E+  V +    ++    E  L  A+   +P+SVA +     F+FY  GV+   +CG   +D++H V AVGYG   G  Y ++KNSWG  WG+ GY +++      + +CGI   AS+P
Sbjct:  203 GGLMDYAFEYIVKNGGLRKEEDYPYSMEEGTCEMQKDESETVTINGHQDVPTNDEKSLLKALAH-QPLSVAIDASGREFQFYSGGVFDG-RCG---VDLDHGVAAVGYGSSKGSDYIIVKNSWGPKWGEKGYIRLKRNTGKPEGLCGINKMASFP 352          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.510e-21
Identity = 54/142 (38.03%), Postives = 81/142 (57.04%), Query Frame = -3
Query:  311 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 736
            GGL   AF+ I   GG++ E  YPY G +  C+ +   + V++       L  E +L   +    P++VA + VD    Y+SG+  +T C +  +  NHAV+ VGYG+E+  PYW+ KNSWG NWG++GYF+     N CG+
Sbjct:  190 GGLMHLAFQEIIRIGGVEHEIDYPYQGIEYACRLAPSKLAVRLSHCYQYDLRDERKLLELLYKNGPIAVAIDCVDIID-YRSGI--ATVCNDNGL--NHAVLLVGYGIENDTPYWIFKNSWGSNWGENGYFRARRNINACGM 326          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.510e-21
Identity = 51/142 (35.92%), Postives = 75/142 (52.82%), Query Frame = -3
Query:  311 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 736
            GGL   AFE +   GGL  E  YPY G  GVCK  ++   + V          E+ L+  +  + P+++A +      + K  ++     G     +NHAV+ VGYG E GV YW +KNSWG +WG+ GYF+++   N CG+
Sbjct:  190 GGLMHTAFEQLMNAGGLMEEIDYPYQGTKGVCKIDNKKFALSVSSCKRYIFQNEENLKKELITMGPIAMAIDAASISTYSKGIIHFCENLG-----LNHAVLLVGYGTEGGVSYWTLKNSWGSDWGEDGYFRVKRNINACGL 326          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.576e-21
Identity = 52/165 (31.52%), Postives = 87/165 (52.73%), Query Frame = -3
Query:  257 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED-GVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPVVA*SAPEEIV 736
            GG  ++A+++I  N G+ TEE YPY    G C  +S      +     +    E  + +AV   +P++   +  + F++Y  GV+S   CG +   +NHA+  +GYG +  G  YW+++NSWG +WG+ GY +M  G      +CGIA    +P +   A  E++
Sbjct:  186 GGWVNKAYDFIISNNGVTTEENYPYLAYQGTCNANSFPNSAYITGYSYVRRNDERSMMYAVSN-QPIAALIDASENFQYYNGGVFSGP-CGTS---LNHAITIIGYGQDSSGTKYWIVRNSWGSSWGEGGYVRMARGVSSSSGVCGIAMAPLFPTLQSGANAEVI 345          
The following BLAST results are available for this feature:
BLAST of DN621643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
CATL_SCHMA2.330e-2238.96Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CATV_NPVRO3.043e-2238.03Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CATV_NPVCF3.043e-2238.03Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATV_NPVBM3.043e-2238.03Viral cathepsin OS=Bombyx mori nuclear polyhedrosi... [more]
RD19A_ARATH5.190e-2239.74Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
CATV_NPVEP6.778e-2238.73Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
XCP2_ARATH8.852e-2238.71Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
CATV_NPVST1.510e-2138.03Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
CATV_NPVAH1.510e-2135.92Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
BROM1_ANACO2.576e-2131.52Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_06P22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621643 ID=DN621643; Name=DN621643; organism=Citrus sinensis; type=EST; length=738bp
TTTTTTTTCCTATAACAACTACCTTGCATTGACAAAATATATATAACATC
GTTGGTGTCCTAGTCACAATGACTGTTTACATGGACATAGATCTCAGAAT
TTATTTTGAACATCAAGCAGCCATGCATTGCTATTGTAGATTATATGGAC
ATTAATCTCCGAATTTATTTCGTACATAAAGCCAACCATTCTGCTATCAT
TCTTGAGTGAAATAATATAAGTTTTATGAGCAAATGACTTGCTGATAGCC
AGATCCAACTATTTCTTCAGGAGCAGACTAAGCCACAACTGGGTATGATG
CACAAGTTGCAATACCACACATGTTCTTCCCCATCTCCATCTTAAAGTAG
CCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCTTAATCAGCCAATATGG
AACACCATCTTCAACTCCGTACCCAACAGCAACGACGGCATGGTTCACAT
CCATGGGAGTATTTCCACATTTAGTGCTGCTGTAAACTCCACTCTTGTAA
AATCGGAATCCATCTACTACTTCAAATGCCACACTCACAGGTCGAACAAG
ACCAACTGCATGCTGTAATTCATCTTCAGCACCCAAGGTAATGTTGACTG
AGTCCAGGACTTGGACGCCAACATTTTCAGATGAGAATTTGCAGACACCA
TCTTTTCCGGTGTAGGGATATGCTTCCTCAGTATCAAGGCCACCATTGTA
CTTGATGTATTCAAAGGCTTGGGATGGCAACCCACCAT
back to top