DN621643

Overview
NameDN621643
Unique NameDN621643
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.255e-16
Identity = 56/157 (35.67%), Postives = 79/157 (50.32%), Query Frame = -3
Query:  290 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITL---GAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM----GKNMCGIATCASYP 736
            GG P  A EY+  NG +     YPY  K G C+  ++ VG  ++ +  +       E  L +A+   +PVSV  E     F+ YK G++    CG     V+HAV AVGYG   G  Y LIKNSWG  WG+ GY +++        +CG+   + YP
Sbjct:  197 GGYPPYALEYVAKNG-IHLRSKYPYKAKQGTCR--AKQVGGPIVKTSGVGRVQPNNEGNLLNAIAK-QPVSVVVESKGRPFQLYKGGIFEGP-CGTK---VDHAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYP 345          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATL1_PARTE (Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT00020990001 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.558e-16
Identity = 56/151 (37.09%), Postives = 83/151 (54.97%), Query Frame = -3
Query:  284 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 736
            GG    AFEY+  NG  + ++ YPYT KDG CK S +     V    +I   + DEL   +   R V+VA +  + ++FY+SGV S  KC     ++NH VV VG   +     W I+NSWG +WG+ G+ ++  G + CGI    S+P++
Sbjct:  177 GGWMDSAFEYVADNGLAEAKD-YPYTAKDGTCKTSVKRPYTHVQGFKDID--SCDELAQTIQ-ERTVAVAVDA-NPWQFYRSGVLS--KCTK---NLNHGVVLVGVQADGA---WKIRNSWGSSWGEAGHIRL-AGGDTCGICAAPSFPIL 313          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 7.259e-16
Identity = 52/155 (33.55%), Postives = 79/155 (50.97%), Query Frame = -3
Query:  290 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSE-NVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM----GKNMCGIATCASYP 736
            GG  + + +Y+  N G+ T + YPY  K   C+ + +    V++     +    E     A+   +P+SV  E     F+ YKSGV+    CG     ++HAV AVGYG  DG  Y +IKNSWG NWG+ GY +++      +  CG+   + YP
Sbjct:  199 GGYQTTSLQYVA-NNGVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALAN-QPLSVLVEAGGKPFQLYKSGVFDGP-CGTK---LDHAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYP 347          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: MEX2_JACME (Chymomexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.259e-16
Identity = 54/156 (34.62%), Postives = 82/156 (52.56%), Query Frame = -3
Query:  287 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGL-VRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKME----MGKNMCGIATCASYPV 736
            GG  + + +Y+  NGG+ TE+ YPY  K G C+ + E  G +V  +    + A DE+    G+  +PVSV  E     F+ YK G+++   CG      +HAV A+GYG        L KNSWG NWG+ GY K++      +  CG+   + +P+
Sbjct:   65 GGYQTGSIQYVADNGGVHTEKEYPYEKKQGKCR-AKEKKGTKVQITGYKRVPANDEISLIQGIGNQPVSVLHESKGRAFQLYKGGIFNG-PCG---YKNDHAVTAIGYGKAQ----LLDKNSWGPNWGEKGYIKIKRASGKSEGTCGVYKSSYFPI 211          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: LMCPA_LEIME (Cysteine proteinase A OS=Leishmania mexicana GN=LMCPA PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.480e-16
Identity = 54/157 (34.39%), Postives = 81/157 (51.59%), Query Frame = -3
Query:  281 GGLPSQAFEYI--KYNGGLDTEEAYPYTGKDGV---CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 736
            GGL  QA  +I   +NG + TE +YPYT   G    C    E VG ++   +++    E+ +   V    PV+VA +    ++ Y  GV S     +    +NH V+ VG+      PYW++KNSWG +WG+ GY ++ MG N C +    +YPV A
Sbjct:  193 GGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPCHDEGE-VGAKITGFLSLPHD-EERIAEWVEKRGPVAVAVDATT-WQLYFGGVVSLCLAWS----LNHGVLIVGFNKNAKPPYWIVKNSWGSSWGEKGYIRLAMGSNQCML---KNYPVSA 339          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CYSP1_LEIPI (Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS1 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.480e-16
Identity = 54/157 (34.39%), Postives = 81/157 (51.59%), Query Frame = -3
Query:  281 GGLPSQAFEYI--KYNGGLDTEEAYPYTGKDGV---CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 736
            GGL  QA  +I   +NG + TE +YPYT   G    C    E VG ++   +++    E+ +   V    PV+VA +    ++ Y  GV S     +    +NH V+ VG+      PYW++KNSWG +WG+ GY ++ MG N C +    +YPV A
Sbjct:  193 GGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPCHDEGE-VGAKITGFLSLPHD-EERIAEWVEKRGPVAVAVDATT-WQLYFGGVVSLCLAWS----LNHGVLIVGFNKNAKPPYWIVKNSWGSSWGEKGYIRLAMGSNQCML---KNYPVSA 339          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATB_RAT (Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.705e-15
Identity = 40/90 (44.44%), Postives = 56/90 (62.22%), Query Frame = -3
Query:  311 AEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 580
            +E E+   +    PV  AF V   F  YKSGVY   + G+      HA+  +G+G+E+GVPYWL+ NSW  +WGD+G+FK+  G+N CGI
Sbjct:  235 SEKEIMAEIYKNGPVEGAFTVFSDFLTYKSGVYKH-EAGDVMG--GHAIRILGWGIENGVPYWLVANSWNVDWGDNGFFKILRGENHCGI 321          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATB2_GIALA (Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.705e-15
Identity = 42/87 (48.28%), Postives = 53/87 (60.92%), Query Frame = -3
Query:  311 LQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED-GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 568
            +  A+    P+ VAF V   F +Y+SGVY  T      M+  HAV  VGYG +D GV YW+IKNSWG +WG+ GYF+M  G N C I
Sbjct:  206 MMKALSTSGPLQVAFLVHSDFMYYESGVYQHTY---GYMEGGHAVEMVGYGTDDDGVDYWIIKNSWGPDWGEDGYFRMIRGINDCSI 289          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CPR1_CAEEL (Gut-specific cysteine proteinase OS=Caenorhabditis elegans GN=cpr-1 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 6.145e-15
Identity = 37/77 (48.05%), Postives = 46/77 (59.74%), Query Frame = -3
Query:  311 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 541
            PV  AF V + F  YKSGVY  T          HA+  +G+G E G PYWL+ NSWG NWG+ G+FK+  G + CGI
Sbjct:  245 PVEAAFSVYEDFYKYKSGVYKHTAGKYLG---GHAIKIIGWGTESGSPYWLVANSWGVNWGESGFFKIYRGDDQCGI 318          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATB3_GIALA (Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 6.145e-15
Identity = 51/137 (37.23%), Postives = 69/137 (50.36%), Query Frame = -3
Query:  311 GLDTEEAYPY----TGKDGVCKFSSENVG-----VQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED-GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 691
            G  T+E  PY    TG  G C     +        +   +V+  L A   +  A+    P+  AF V   F +Y+SGVY  T      ++  HAV  VGYG +D GV YW+IKNSWG +WG+ GYF++    N CGI
Sbjct:  156 GTTTDECVPYQSGSTGARGTCPTKCADGSDLPHLYKATKAVDYGLDAP-AIMKALATGGPLQTAFTVYSDFMYYESGVYQHTY---GRVEGGHAVDMVGYGTDDDGVDYWIIKNSWGPDWGEDGYFRIIRMTNECGI 288          
The following BLAST results are available for this feature:
BLAST of DN621643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
PAPA3_CARPA4.255e-1635.67Caricain OS=Carica papaya PE=1 SV=2[more]
CATL1_PARTE5.558e-1637.09Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT0... [more]
PAPA2_CARPA7.259e-1633.55Chymopapain OS=Carica papaya PE=1 SV=2[more]
MEX2_JACME7.259e-1634.62Chymomexicain OS=Jacaratia mexicana PE=1 SV=1[more]
LMCPA_LEIME9.480e-1634.39Cysteine proteinase A OS=Leishmania mexicana GN=LM... [more]
CYSP1_LEIPI9.480e-1634.39Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS... [more]
CATB_RAT4.705e-1544.44Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2[more]
CATB2_GIALA4.705e-1548.28Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=... [more]
CPR1_CAEEL6.145e-1548.05Gut-specific cysteine proteinase OS=Caenorhabditis... [more]
CATB3_GIALA6.145e-1537.23Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621643 ID=DN621643; Name=DN621643; organism=Citrus sinensis; type=EST; length=738bp
TTTTTTTTCCTATAACAACTACCTTGCATTGACAAAATATATATAACATC
GTTGGTGTCCTAGTCACAATGACTGTTTACATGGACATAGATCTCAGAAT
TTATTTTGAACATCAAGCAGCCATGCATTGCTATTGTAGATTATATGGAC
ATTAATCTCCGAATTTATTTCGTACATAAAGCCAACCATTCTGCTATCAT
TCTTGAGTGAAATAATATAAGTTTTATGAGCAAATGACTTGCTGATAGCC
AGATCCAACTATTTCTTCAGGAGCAGACTAAGCCACAACTGGGTATGATG
CACAAGTTGCAATACCACACATGTTCTTCCCCATCTCCATCTTAAAGTAG
CCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCTTAATCAGCCAATATGG
AACACCATCTTCAACTCCGTACCCAACAGCAACGACGGCATGGTTCACAT
CCATGGGAGTATTTCCACATTTAGTGCTGCTGTAAACTCCACTCTTGTAA
AATCGGAATCCATCTACTACTTCAAATGCCACACTCACAGGTCGAACAAG
ACCAACTGCATGCTGTAATTCATCTTCAGCACCCAAGGTAATGTTGACTG
AGTCCAGGACTTGGACGCCAACATTTTCAGATGAGAATTTGCAGACACCA
TCTTTTCCGGTGTAGGGATATGCTTCCTCAGTATCAAGGCCACCATTGTA
CTTGATGTATTCAAAGGCTTGGGATGGCAACCCACCAT
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