DN621643

Overview
NameDN621643
Unique NameDN621643
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:779..1516. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CYSP3_OSTOS (Cathepsin B-like cysteine proteinase 3 (Fragment) OS=Ostertagia ostertagi GN=CP-3 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.511e-13
Identity = 35/77 (45.45%), Postives = 45/77 (58.44%), Query Frame = -3
Query:  311 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 541
            PV   F V + F  YKSG+Y  T      M   HAV  +G+G E G PYWLI NSW ++WG+ G+++M  G N C I
Sbjct:   92 PVVAGFIVYEDFAHYKSGIYKHTA---GRMTGGHAVKIIGWGKEKGTPYWLIANSWHDDWGEKGFYRMIRGINNCRI 165          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CYSP2_HAECO (Cathepsin B-like cysteine proteinase 2 OS=Haemonchus contortus GN=AC-2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.810e-13
Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = -3
Query:  311 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 541
            PV  +F V + FR YKSG+Y  T      +   HAV  +G+G E+   +WLI NSW  +WG+ GYF++  G N CGI
Sbjct:  255 PVVASFAVYEDFRHYKSGIYKHTA---GELRGYHAVKMIGWGNENNTDFWLIANSWHNDWGEKGYFRIVRGSNDCGI 328          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATL3_PARTE (Putative cathepsin L 3 OS=Paramecium tetraurelia GN=GSPATT00022199001 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 9.810e-13
Identity = 46/142 (32.39%), Postives = 73/142 (51.41%), Query Frame = -3
Query:  311 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 736
            GG  + A EY+    GL +   YPY  K+  CK S    G   ++  +   G++  LQ+ +    P+SV  E    ++FY+SG++S+     T    NH  +AVG+   D    W+++NSWG  WG+ G  ++   +N CGI
Sbjct:  172 GGYNAYAMEYV-LRVGLVSSTNYPYVAKNQTCKQSRN--GTYFINGYSFVGGSQSNLQYYLNNY-PISVGVEA-SNWQFYRSGLFSNCSSNGT----NHYALAVGF---DSANNWIVQNSWGTQWGESGNIRL-YPQNTCGI 300          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATB_CHICK (Cathepsin B OS=Gallus gallus GN=CTSB PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.810e-13
Identity = 37/90 (41.11%), Postives = 50/90 (55.56%), Query Frame = -3
Query:  311 AEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 580
            +E E+   +    PV  AF V + F  YKSGVY             HA+  +G+GVE+G PYWL  NSW  +WG  G+FK+  G++ CGI
Sbjct:  236 SEKEIMAEIYKNGPVEGAFIVYEDFLMYKSGVYQHVSGEQVG---GHAIRILGWGVENGTPYWLAANSWNTDWGITGFFKILRGEDHCGI 322          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CYSP1_HAECO (Cathepsin B-like cysteine proteinase 1 OS=Haemonchus contortus GN=AC-1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12
Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = -3
Query:  311 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 541
            PV  +F V + FR YKSG+Y  T      +   HAV  +G+G E+   +WLI NSW  +WG+ GYF++  G N CGI
Sbjct:  255 PVVASFAVYEDFRHYKSGIYKHTA---GELRGYHAVKMIGWGNENNTDFWLIANSWHNDWGEKGYFRIIRGTNDCGI 328          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CYSP_THEPA (Cysteine proteinase OS=Theileria parva GN=TP03_0285 PE=3 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.185e-12
Identity = 50/148 (33.78%), Postives = 78/148 (52.70%), Query Frame = -3
Query:  311 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKF-SSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP--YWLIKNSWGENWGDHGYFKME---MGKNMCGI 736
            GGL   A+EY++   GL + +  P+  K   C    ++ V V    S ++  G E   +       P SV   V      YKSGV++  +CG +   +NHAVV VG G ++     YW+++NSWG +WG++GY ++E   MG + CG+
Sbjct:  293 GGLLESAYEYVR-KYGLVSAKDLPFVDKARRCSVPKAKKVSVP---SYHVFKGKEVMTRSLTS--SPCSVYLSVSPELAKYKSGVFTG-ECGKS---LNHAVVLVGEGYDEVTKKRYWVVQNSWGTDWGENGYMRLERTNMGTDKCGV 430          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVN (Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.728e-12
Identity = 51/186 (27.42%), Postives = 81/186 (43.55%), Query Frame = -3
Query:  287 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAE-DELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-------------------------------EDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPV 736
            GG P  AF Y+  N G+   + YPY G +    F   N    +L  V+     + +EL  A+  V PV++A    + F  Y  GV+     G    ++NH+V+ VGYG                                +D + YW+++NSWG NWG+ GY +++  K      CG+ +   +P+
Sbjct:  328 GGNPFYAFLYM-INNGVCLGDEYPYKGHED---FFCLNYRCSLLGRVHFIGDVKPNELIMALNYVGPVTIAVGASEDFVLYSGGVFD----GECNPELNHSVLLVGYGQVKKSLAFEDSHSNVDSNLIKKYKENIKGDDDDDIIYYWIVRNSWGPNWGEGGYIRIKRNKAGDDGFCGVGSDVFFPI 505          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATB1_GIALA (Cathepsin B-like CP1 OS=Giardia lamblia GN=CP1 PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 5.383e-11
Identity = 34/78 (43.59%), Postives = 46/78 (58.97%), Query Frame = -3
Query:  311 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 541
            P+     V     +Y+SGVY  T  G   +   HA+  VGYG  +DG  YW+IKNSWG +WG++GYF++  G N C I
Sbjct:  218 PLQTMIVVYADLSYYESGVYKHTY-GTINLGF-HALEIVGYGTTDDGTDYWIIKNSWGPDWGENGYFRIVRGVNECRI 293          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: PEPT1_PSOOV (Peptidase 1 OS=Psoroptes ovis PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.182e-11
Identity = 43/135 (31.85%), Postives = 66/135 (48.89%), Query Frame = -3
Query:  311 YIKYNGGLDTEEAYPYTGKDGVCKF-SSENVGVQVLDSVNITLGAEDELQHAVGLVR-PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 709
            YI+ NG ++ E++YPY  ++G C+  +++  G++ L  +    G +     A       V +    +D FR Y       +  G       HA+  VGYG + GV YW+I+NSW   WGD GY      KN+ GI
Sbjct:  182 YIQKNGVVE-EQSYPYKAREGRCQRPNAKRYGIKDLCQIYPPNGDKIRTYLATKQAALSVIIGIRDLDSFRHYDGRTILQSDNGGKRNF--HAINIVGYGSKQGVRYWIIRNSWDTTWGDKGYGYFVADKNLMGI 313          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATZ_BOVIN (Cathepsin Z OS=Bos taurus GN=CTSZ PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.182e-11
Identity = 41/146 (28.08%), Postives = 67/146 (45.89%), Query Frame = -3
Query:  338 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC-KFS-----SENVGVQVLDSVNI-------TLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKM 736
            GG     +EY  +  G+  E    Y  KD  C KF+     +E     V+ +  +       +L   +++   +    P+S      +    Y  G+YS     N    +NH V   G+GV DG+ YW+++NSWGE WG+HG+ ++
Sbjct:  135 GGNDLPVWEYA-HRHGIPDETCNNYQAKDQECDKFNQCGTCTEFKECHVIKNYTLWKVGDYGSLSGREKMMAEIYTNGPISCGIMATEKMSNYTGGIYSEY---NDQAFINHIVSVAGWGVSDGMEYWIVRNSWGEPWGEHGWMRI 276          
The following BLAST results are available for this feature:
BLAST of DN621643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
CYSP3_OSTOS7.511e-1345.45Cathepsin B-like cysteine proteinase 3 (Fragment) ... [more]
CYSP2_HAECO9.810e-1344.16Cathepsin B-like cysteine proteinase 2 OS=Haemonch... [more]
CATL3_PARTE9.810e-1332.39Putative cathepsin L 3 OS=Paramecium tetraurelia G... [more]
CATB_CHICK9.810e-1341.11Cathepsin B OS=Gallus gallus GN=CTSB PE=2 SV=1[more]
CYSP1_HAECO1.673e-1244.16Cathepsin B-like cysteine proteinase 1 OS=Haemonch... [more]
CYSP_THEPA2.185e-1233.78Cysteine proteinase OS=Theileria parva GN=TP03_028... [more]
CYSP_PLAVN3.728e-1227.42Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=... [more]
CATB1_GIALA5.383e-1143.59Cathepsin B-like CP1 OS=Giardia lamblia GN=CP1 PE=... [more]
PEPT1_PSOOV9.182e-1131.85Peptidase 1 OS=Psoroptes ovis PE=1 SV=1[more]
CATZ_BOVIN9.182e-1128.08Cathepsin Z OS=Bos taurus GN=CTSZ PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621643 ID=DN621643; Name=DN621643; organism=Citrus sinensis; type=EST; length=738bp
TTTTTTTTCCTATAACAACTACCTTGCATTGACAAAATATATATAACATC
GTTGGTGTCCTAGTCACAATGACTGTTTACATGGACATAGATCTCAGAAT
TTATTTTGAACATCAAGCAGCCATGCATTGCTATTGTAGATTATATGGAC
ATTAATCTCCGAATTTATTTCGTACATAAAGCCAACCATTCTGCTATCAT
TCTTGAGTGAAATAATATAAGTTTTATGAGCAAATGACTTGCTGATAGCC
AGATCCAACTATTTCTTCAGGAGCAGACTAAGCCACAACTGGGTATGATG
CACAAGTTGCAATACCACACATGTTCTTCCCCATCTCCATCTTAAAGTAG
CCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCTTAATCAGCCAATATGG
AACACCATCTTCAACTCCGTACCCAACAGCAACGACGGCATGGTTCACAT
CCATGGGAGTATTTCCACATTTAGTGCTGCTGTAAACTCCACTCTTGTAA
AATCGGAATCCATCTACTACTTCAAATGCCACACTCACAGGTCGAACAAG
ACCAACTGCATGCTGTAATTCATCTTCAGCACCCAAGGTAATGTTGACTG
AGTCCAGGACTTGGACGCCAACATTTTCAGATGAGAATTTGCAGACACCA
TCTTTTCCGGTGTAGGGATATGCTTCCTCAGTATCAAGGCCACCATTGTA
CTTGATGTATTCAAAGGCTTGGGATGGCAACCCACCAT
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