DN621643

Overview
NameDN621643
Unique NameDN621643
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:779..1516. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.846e-28
Identity = 65/153 (42.48%), Postives = 87/153 (56.86%), Query Frame = -3
Query:  284 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 736
            GG  + AF+YI  N G+D+E +YPY   +G C++ S+           +  G+ED L+ AV    PVSVA +     F  Y+SGVY    C     +VNH V+ VGYG  +G  YWL+KNSWG N+GD GY +M     N CGIA+  SYP +
Sbjct:  182 GGFMTTAFQYIIDNNGIDSEASYPYKAMNGKCRYDSKKRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSC---TQNVNHGVLVVGYGNLNGKDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIASYPSYPEI 331          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.080e-27
Identity = 69/157 (43.95%), Postives = 90/157 (57.32%), Query Frame = -3
Query:  284 GGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE---DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 736
            GGL   AF Y+K NGGLD+EE+YPY G+D   C +  E         V++    E  L  AV  + P+SVA +     F+FYKSG+Y    C +   D++H V+ VGYG E       +W++KNSWG  WG +GY KM   + N CGIAT ASYP V
Sbjct:  180 GGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLP-QREKALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSS--KDLDHGVLVVGYGFEGTDSNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 333          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.080e-27
Identity = 66/155 (42.58%), Postives = 90/155 (58.06%), Query Frame = -3
Query:  287 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM---GKNMCGIATCASYPV 736
            GG  +  F++I  NGG++TEE YPYT +DG C    +N     +D+  N+    E  LQ AV   +PVSVA +   D F+ Y SG+++   CG     ++HAV  VGYG E G+ YW++KNSW   WG+ GY ++     G   CGIAT  SYPV
Sbjct:  193 GGYITDGFQFIINNGGINTEENYPYTAQDGECNLDLQNEKYVTIDTYENVPYNNEWALQTAV-TYQPVSVALDAAGDAFKHYSSGIFTGP-CGTA---IDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGIATMPSYPV 342          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 1.842e-27
Identity = 71/158 (44.94%), Postives = 90/158 (56.96%), Query Frame = -3
Query:  284 GGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 736
            GGL   AF+YIK NGGLD+EE+YPY   D   C +  E         V+I    E  L  AV  V P+SVA +     F+FYKSG+Y    C +   D++H V+ VGYG E    +   +W++KNSWG  WG +GY KM   + N CGIAT ASYP V
Sbjct:  180 GGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIP-QREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSS--KDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 334          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 122.865 bits (307), Expect = 1.842e-27
Identity = 67/155 (43.23%), Postives = 90/155 (58.06%), Query Frame = -3
Query:  287 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM---GKNMCGIATCASYPV 736
            GG  +  F++I  NGG++TEE YPYT +DG C    +N     +D+  N+    E  LQ AV   +PVSVA +   D F+ Y SG+++   CG     V+HAV  VGYG E G+ YW++KNSW   WG+ GY ++     G   CGIAT  SYPV
Sbjct:  193 GGYITDGFQFIINNGGINTEENYPYTAQDGECNVDLQNEKYVTIDTYENVPYNNEWALQTAV-TYQPVSVALDAAGDAFKQYSSGIFTGP-CGTA---VDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGIATMPSYPV 342          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.405e-27
Identity = 65/156 (41.67%), Postives = 94/156 (60.26%), Query Frame = -3
Query:  287 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKM----EMGKNMCGIATCASYPV 736
            GGL   AFE+I  NGG+DT++ YPY G DG C    +N  V  +DS  ++   +E+ L+ AV   +P+S+A E     F+ Y SG++  + CG     ++H VVAVGYG E+G  YW+++NSWG++WG+ GY +M          CGIA   SYP+
Sbjct:  202 GGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAH-QPISIAIEAGGRAFQLYDSGIFDGS-CGT---QLDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLRMARNIASSSGKCGIAIEPSYPI 352          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.405e-27
Identity = 66/157 (42.04%), Postives = 89/157 (56.69%), Query Frame = -3
Query:  287 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSEN-VGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 736
            GGL   AFE+IK  GG+ TE  YPY  ++G C  S  N + V +    N+    ED L  AV   +PVSVA +     F+FY  GV++    G+   D+NH V  VGYG   DG  YW+++NSWG  WG+HGY +M+      + +CGIA   SYP+
Sbjct:  193 GGLMESAFEFIKQKGGITTESNYPYKAQEGTCDASKVNDLAVSIDGHENVPANDEDALLKAVAN-QPVSVAIDAGGSDFQFYSEGVFT----GDCSTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEHGYIRMQRNISKKEGLCGIAMLPSYPI 344          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.141e-27
Identity = 73/167 (43.71%), Postives = 95/167 (56.89%), Query Frame = -3
Query:  266 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS----SENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGK----NMCGIATCASYPVVA*SAPE 736
            GGL   AFEYIK NGGL TE AYPY    G C  +    +  V V +    ++   +E++L  AV   +PVSVA E     F FY  GV++  +CG    +++H V  VGYGV EDG  YW +KNSWG +WG+ GY ++E        +CGIA  ASYPV   S P+
Sbjct:  199 GGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVAN-QPVSVAVEASGKAFMFYSEGVFTG-ECGT---ELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVKTYSKPK 360          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 4.103e-27
Identity = 69/157 (43.95%), Postives = 95/157 (60.51%), Query Frame = -3
Query:  287 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-----KNMCGIATCASYPV 736
            GGL   AF++I  NGGL+TE+ YPY G  G C    +N  V  +D   ++    E  L+ A+   +PVSVA E     F+ Y+SG+++ + CG    +++HAVVAVGYG E+GV YW+++NSWG  WG+ GY +ME          CGIA  ASYPV
Sbjct:  210 GGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRVVSIDGYEDVPTKDETALKKAISY-QPVSVAIEAGGRIFQHYQSGIFTGS-CGT---NLDHAVVAVGYGSENGVDYWIVRNSWGPRWGEEGYIRMERNLAASKSGKCGIAVEASYPV 361          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.103e-27
Identity = 66/157 (42.04%), Postives = 91/157 (57.96%), Query Frame = -3
Query:  287 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSEN-VGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 736
            GGL   AFE+IK  GG+ TE  YPYT ++G C  S  N + V +    N+ +  E+ L  AV   +PVSVA +     F+FY  GV++    G+   D+NH V  VGYG   DG  YW+++NSWG  WG+ GY +M+      + +CGIA  ASYP+
Sbjct:  193 GGLMESAFEFIKQKGGITTESNYPYTAQEGTCDESKVNDLAVSIDGHENVPVNDENALLKAVA-NQPVSVAIDAGGSDFQFYSEGVFT----GDCNTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEQGYIRMQRNISKKEGLCGIAMMASYPI 344          
The following BLAST results are available for this feature:
BLAST of DN621643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
CATS_CANFA4.846e-2842.48Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CATL1_CANFA1.080e-2743.95Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
ACTN_ACTDE1.080e-2742.58Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
CATL1_BOVIN1.842e-2744.94Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
ACTN_ACTCH1.842e-2743.23Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
RD21A_ARATH2.405e-2741.67Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
CYSEP_PHAVU2.405e-2742.04Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CYSP2_HORVU3.141e-2743.71Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
GCP1_ARATH4.103e-2743.95Germination-specific cysteine protease 1 OS=Arabid... [more]
CYSEP_VIGMU4.103e-2742.04Vignain OS=Vigna mungo PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621643 ID=DN621643; Name=DN621643; organism=Citrus sinensis; type=EST; length=738bp
TTTTTTTTCCTATAACAACTACCTTGCATTGACAAAATATATATAACATC
GTTGGTGTCCTAGTCACAATGACTGTTTACATGGACATAGATCTCAGAAT
TTATTTTGAACATCAAGCAGCCATGCATTGCTATTGTAGATTATATGGAC
ATTAATCTCCGAATTTATTTCGTACATAAAGCCAACCATTCTGCTATCAT
TCTTGAGTGAAATAATATAAGTTTTATGAGCAAATGACTTGCTGATAGCC
AGATCCAACTATTTCTTCAGGAGCAGACTAAGCCACAACTGGGTATGATG
CACAAGTTGCAATACCACACATGTTCTTCCCCATCTCCATCTTAAAGTAG
CCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCTTAATCAGCCAATATGG
AACACCATCTTCAACTCCGTACCCAACAGCAACGACGGCATGGTTCACAT
CCATGGGAGTATTTCCACATTTAGTGCTGCTGTAAACTCCACTCTTGTAA
AATCGGAATCCATCTACTACTTCAAATGCCACACTCACAGGTCGAACAAG
ACCAACTGCATGCTGTAATTCATCTTCAGCACCCAAGGTAATGTTGACTG
AGTCCAGGACTTGGACGCCAACATTTTCAGATGAGAATTTGCAGACACCA
TCTTTTCCGGTGTAGGGATATGCTTCCTCAGTATCAAGGCCACCATTGTA
CTTGATGTATTCAAAGGCTTGGGATGGCAACCCACCAT
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