DN621643

Overview
NameDN621643
Unique NameDN621643
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:779..1516. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 8.554e-25
Identity = 67/158 (42.41%), Postives = 88/158 (55.70%), Query Frame = -3
Query:  284 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKN-SWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 736
            GG     F Y++ NGGLD+E +YPY GK   C+++ +         V+I    E +L  AV  V P+SVA       F+FYK G+Y   +C   P  ++HA++ VGY  E    D   YWL+KN S G+NWG  GY KM    +N CGIAT ASYP V
Sbjct:  123 GGFMDNPFRYVQENGGLDSEASYPYEGKVKTCRYNPKYSAANDTGFVDIP-SQEKDLAKAVATVGPISVAAGASHVSFQFYKKGIYFEPRC--DPEGLDHAMLLVGYSYEGADSDNNKYWLVKNSSEGKNWGMDGYIKMAKDRRNNCGIATAASYPTV 277          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.489e-24
Identity = 67/157 (42.68%), Postives = 91/157 (57.96%), Query Frame = -3
Query:  290 GGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCKFS-SENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKN----MCGIATCASYP 736
            GG+ + AFE+I  NGG++T++ YPY   D G+C    + N  V  +D   ++    E  L+ AV   +PVSVA E     F+ YKSGV + T CG   + ++H VV VGYG   G  YW+I+NSWG NWGD GY K++   +     CGIA   SYP
Sbjct:  196 GGIMNYAFEFIMKNGGIETDQDYPYNANDLGLCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAH-QPVSVAIEASSQAFQLYKSGVMTGT-CG---ISLDHGVVVVGYGSTSGEDYWIIRNSWGLNWGDSGYVKLQRNIDDPFGKCGIAMMPSYP 347          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.489e-24
Identity = 65/152 (42.76%), Postives = 84/152 (55.26%), Query Frame = -3
Query:  290 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSG-VYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM-GKNMCGIATCASYP 736
            GG PS + ++I+ N GL  E  YPY    G CK   +NV   V  S  +T G+E  LQ  +    PV+V  +     F+ YK G +YS TKC +  M  NH V AVGYG      YW+I+NSWG +WGD GYF +     NMCGI   ++YP
Sbjct:  155 GGHPSNSLKFIQENNGLGLESDYPYKAVAGTCK-KVKNVAT-VTGSRRVTDGSETGLQTIIAENGPVAVGMDASRPSFQLYKKGTIYSDTKCRSRMM--NHCVTAVGYGSNSNGKYWIIRNSWGTSWGDAGYFLLARDSNNMCGIGRDSNYP 302          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.251e-24
Identity = 64/142 (45.07%), Postives = 84/142 (59.15%), Query Frame = -3
Query:  311 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 736
            GGL S AFE I   GG+  E  YPYTG DGVCK ++  V  Q+       L +E +L+  +    PVSVA +VVD    YKSGV    K  +    +NH V+ VGYG E+ V YW +KNSWG +WG+ G+F+++   N CGI
Sbjct:  197 GGLMSWAFEGIIRAGGISYEAPYPYTGVDGVCKNTTRYV--QLSGCYAYDLRSEKKLRQVLHEKGPVSVAIDVVD-LTNYKSGV---AKHCSVDHGLNHGVLLVGYGQENDVKYWTLKNSWGSDWGEQGFFRIKRDVNSCGI 332          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CPGP1_ZINOF (Zingipain-1 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.242e-24
Identity = 62/156 (39.74%), Postives = 88/156 (56.41%), Query Frame = -3
Query:  287 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM----GKNMCGIATCASYPV 736
            GG P +AF+YI  NGG+++EE YPYTG +G C  + EN  V  +DS  N+    E  LQ AV   +PVSV  +     F+ Y++G+++    G+  +  NH     G   E+   YW +KNSWG+NWG+ GY ++E         CGIA   SYP+
Sbjct:   67 GGWPYRAFQYIINNGGINSEEHYPYTGTNGTCD-TKENAHVVSIDSYRNVPSNDEKSLQKAVA-NQPVSVTMDAAGRDFQLYRNGIFT----GSCNISANHYRTVGGRETENDKDYWTVKNSWGKNWGESGYIRVERNIAESSGKCGIAISPSYPI 216          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.242e-24
Identity = 56/142 (39.44%), Postives = 80/142 (56.34%), Query Frame = -3
Query:  311 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 736
            GGL   A+E +   GG+  E  YPY G DG C+       V+V          E++L+  + +V P+ VA +  D    Y+ G+     C N     NHAV+ VGYGVE+ VPYW++KN+WGE+WG+ GYF+++   N CGI
Sbjct:  177 GGLLHTAYEAVMQMGGVQAENDYPYEGSDGNCRVDVAKFVVKVKKCYRYIAVFEEKLKDLLRIVGPIPVAIDASDIVN-YRRGIMRY--CSN--YGFNHAVLLVGYGVENNVPYWILKNTWGEDWGEQGYFRVQQNINACGI 313          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.458e-24
Identity = 62/156 (39.74%), Postives = 84/156 (53.85%), Query Frame = -3
Query:  287 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC--KFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 736
            GG    A+E+I  NGGL T+  YPY   +GVC  +   +N  V +    N+    E  L  AV      +V       F+ Y+SGV+  T CG    ++NH VV VGYG E+G  YW++KNS G+ WG+ GY KM       + +CGIA  ASYP+
Sbjct:  208 GGKVETAYEFIMNNGGLGTDNDYPYKALNGVCEGRLKEDNKNVMIDGYENLPANDEAALMKAVAHQPVTAVVDSSSREFQLYESGVFDGT-CGT---NLNHGVVVVGYGTENGRDYWIVKNSRGDTWGEAGYMKMARNIANPRGLCGIAMRASYPL 359          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.613e-23
Identity = 63/156 (40.38%), Postives = 88/156 (56.41%), Query Frame = -3
Query:  296 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR--PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP-------YWLIKNSWGENWGDHGYFKMEMGKNMCGIATCAS 736
            GGL + AFEY+  +GG+  E+ Y YTG+DG CKF    V   V +   +TL   DE Q A  LV+  P++VA       + Y SGV     C  + +D  H V+ VG+G     P       YW+IKNSWG+NWG+ GY+K+  G+N+CG+ +  S
Sbjct:  205 GGLMNNAFEYLLESGGVVQEKDYAYTGRDGSCKFDKSKVVASVSNFSVVTL---DEDQIAANLVKNGPLAVAINAA-WMQTYMSGVSCPYVCAKSRLD--HGVLLVGFGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVDSMVS 354          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.613e-23
Identity = 57/158 (36.08%), Postives = 86/158 (54.43%), Query Frame = -3
Query:  281 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED------GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 736
            GGL   A++ IK  GGL+ E  YPY  K   C F+     VQV   V++  G E  +Q  +    P+S+     +  +FY+ GV    K   +  +++H V+ VGYGV D       +PYW++KNSWG  WG+ GY+++  G N CG++  A+  V+A
Sbjct:  458 GGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLANGPISIGINA-NAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVLA 614          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.613e-23
Identity = 49/142 (34.51%), Postives = 84/142 (59.15%), Query Frame = -3
Query:  311 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 736
            GGL   AF+ +   GG++TE  YPY G + +C   +  + V++       +  E++L+  V    PV++A + +D    Y+ G+ +         D+NHAV+ +G+G+E+ VPYW+IKNSWGE+WG++G+ ++    N CG+
Sbjct:  220 GGLMHLAFQELLLMGGVETEADYPYQGSEQMCTLDNRKIAVKLNSCFKYDIRDENKLKELVYTTGPVAIAVDAMDIIN-YRRGILNQCHI----YDLNHAVLLIGWGIENNVPYWIIKNSWGEDWGENGFLRVRRNVNACGL 356          
The following BLAST results are available for this feature:
BLAST of DN621643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
CATL6_HUMAN8.554e-2542.41Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CPR1_ARATH2.489e-2442.68Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
ACP1_ENTHI2.489e-2442.76Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
CATV_GVXN3.251e-2445.07Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CPGP1_ZINOF7.242e-2439.74Zingipain-1 OS=Zingiber officinale PE=1 SV=1[more]
CATV_NPVHC7.242e-2439.44Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
CPR4_ARATH9.458e-2439.74Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CYSP_PEA1.613e-2340.38Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
CPR1_DROME1.613e-2336.08Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATV_NPVHZ1.613e-2334.51Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621643 ID=DN621643; Name=DN621643; organism=Citrus sinensis; type=EST; length=738bp
TTTTTTTTCCTATAACAACTACCTTGCATTGACAAAATATATATAACATC
GTTGGTGTCCTAGTCACAATGACTGTTTACATGGACATAGATCTCAGAAT
TTATTTTGAACATCAAGCAGCCATGCATTGCTATTGTAGATTATATGGAC
ATTAATCTCCGAATTTATTTCGTACATAAAGCCAACCATTCTGCTATCAT
TCTTGAGTGAAATAATATAAGTTTTATGAGCAAATGACTTGCTGATAGCC
AGATCCAACTATTTCTTCAGGAGCAGACTAAGCCACAACTGGGTATGATG
CACAAGTTGCAATACCACACATGTTCTTCCCCATCTCCATCTTAAAGTAG
CCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCTTAATCAGCCAATATGG
AACACCATCTTCAACTCCGTACCCAACAGCAACGACGGCATGGTTCACAT
CCATGGGAGTATTTCCACATTTAGTGCTGCTGTAAACTCCACTCTTGTAA
AATCGGAATCCATCTACTACTTCAAATGCCACACTCACAGGTCGAACAAG
ACCAACTGCATGCTGTAATTCATCTTCAGCACCCAAGGTAATGTTGACTG
AGTCCAGGACTTGGACGCCAACATTTTCAGATGAGAATTTGCAGACACCA
TCTTTTCCGGTGTAGGGATATGCTTCCTCAGTATCAAGGCCACCATTGTA
CTTGATGTATTCAAAGGCTTGGGATGGCAACCCACCAT
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