DN621643

Overview
NameDN621643
Unique NameDN621643
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:779..1516. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.613e-23
Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = -3
Query:  281 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG--FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVVA 736
            GG     FEY+K NG L+++  YPY+GK+  CK + ++  V  L        +E  L+ AVG + P+S    VV G   + Y  G++  + C     +++H V  VGYG+E+G  YW+IKN+WG +WG+ GY ++     + CG+   ASYP++A
Sbjct:  176 GGFAVNGFEYVKDNG-LESDADYPYSGKEDKCKANDKSRSVVELTGYKKVTASETSLKEAVGTIGPISA---VVFGKPMKSYGGGIFDDSSCLGD--NLHHGVNVVGYGIENGQKYWIIKNTWGADWGESGYIRLIRDTDHSCGVEKMASYPILA 324          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.107e-23
Identity = 57/159 (35.85%), Postives = 93/159 (58.49%), Query Frame = -3
Query:  284 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR--PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGV-----PYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 736
            GGL   A+ YI  NGG+ TE +YPYT + G  C F+S N+G ++    N T+  ++E   A  +V   P+++A + V+ ++FY  GV+    C   P  ++H ++ VGY  ++ +     PYW++KNSWG +WG+ GY  +  GKN CG++   S  ++
Sbjct:  192 GGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKIS---NFTMIPKNETVMAGYIVSTGPLAIAADAVE-WQFYIGGVFD-IPCN--PNSLDHGILIVGYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSII 343          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23
Identity = 60/142 (42.25%), Postives = 85/142 (59.86%), Query Frame = -3
Query:  311 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 736
            GGL   A E I   GG+ + E  PY G DGVCK S   + +    S    L  E++L+  + +  P+SVA +V D    YK+G+  +  C N    +NHAV+ VGYGV++ VPYW++KNSWG  WG+ GYF+++  KN CG+
Sbjct:  188 GGLMHWALESILQEGGVVSAENEPYYGFDGVCKKSPFELSIS--GSRRYVLQNENKLRELLVVNGPISVAIDVSDLIN-YKAGI--ADICENNE-GLNHAVLLVGYGVKNDVPYWILKNSWGAEWGEEGYFRVQRDKNSCGM 323          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.694e-23
Identity = 61/154 (39.61%), Postives = 84/154 (54.55%), Query Frame = -3
Query:  290 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYP 736
            GGL   AF+YI   GGL  E+ YPY  ++G+C+   E+V    +         +DE        +PVSVA E     F+FYK GV++  KCG    D++H V AVGYG   G  Y ++KNSWG  WG+ G+ +M+      + +CGI   ASYP
Sbjct:  202 GGLMDYAFQYIISTGGLHKEDDYPYLMEEGICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYKGGVFNG-KCGT---DLDHGVAAVGYGSSKGSDYVIVKNSWGPRWGEKGFIRMKRNTGKPEGLCGINKMASYP 351          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.694e-23
Identity = 55/142 (38.73%), Postives = 82/142 (57.75%), Query Frame = -3
Query:  311 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 736
            GGL   A+E +   GG+  E  YPY   +G C+ ++    V+V       L  E++L+  + +V P+ VA +  D    YK GV     C N  +  NHAV+ VGY VE+GVP+W++KN+WG +WG+ GYF+++   N CGI
Sbjct:  177 GGLLHTAYEAVMNMGGIQAENDYPYEANNGDCRLNAAKFVVKVKKCYRYVLMFEEKLKDLLRIVGPLPVAIDASDIVN-YKRGVIRY--CANHGL--NHAVLLVGYAVENGVPFWILKNTWGTDWGEQGYFRVQQNINACGI 313          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.130e-23
Identity = 60/154 (38.96%), Postives = 89/154 (57.79%), Query Frame = -3
Query:  281 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSEN-VGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIAT-CASYPVVA 736
            GGL   AFE I   GG+ TE  YP+ G++  C         V ++      +  E++L+  +  V P+ +A +  D   +Y+ GV SS  C N  +  NHAV+ VGYGVE+GVPYW+ KN+WG++WG++GYF++    N CG+    AS  V+A
Sbjct:  208 GGLLHTAFEEIMRMGGVQTELDYPFVGRNRRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAIDAADIVNYYR-GVISS--CENNGL--NHAVLLVGYGVENGVPYWVFKNTWGDDWGENGYFRVRQNVNACGMVNDLASTAVLA 356          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.046e-22
Identity = 62/156 (39.74%), Postives = 82/156 (52.56%), Query Frame = -3
Query:  287 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC--KFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 736
            GG    A+E+I  NGGL T+  YPY   +GVC  +    N  V +    N+    E  L  AV      +V       F+ Y+SGV+  + CG    ++NH VV VGYG E+G  YWL+KNS G  WG+ GY KM       + +CGIA  ASYP+
Sbjct:  201 GGKLETAYEFIMKNGGLGTDNDYPYKAVNGVCDGRLKENNKNVMIDGYENLPANDESALMKAVAHQPVTAVIDSSSREFQLYESGVFDGS-CGT---NLNHGVVVVGYGTENGRDYWLVKNSRGITWGEAGYMKMARNIANPRGLCGIAMRASYPL 352          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.046e-22
Identity = 53/142 (37.32%), Postives = 82/142 (57.75%), Query Frame = -3
Query:  311 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 736
            GGL   A+E +   GG+  E  YPY   +G C+ ++    V+V          E++L+  + +V P+ VA +  D    YK G+     C N  +  NHAV+ VGYGVE+G+P+W++KN+WG +WG+ GYF+++   N CGI
Sbjct:  177 GGLLHTAYEAVMNMGGIQAENDYPYEANNGPCRVNAAKFVVRVKKCYRYVTLFEEKLKDLLRIVGPIPVAIDASD-IVGYKRGIIRY--CENHGL--NHAVLLVGYGVENGIPFWILKNTWGADWGEQGYFRVQQNINACGI 313          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.784e-22
Identity = 59/158 (37.34%), Postives = 87/158 (55.06%), Query Frame = -3
Query:  296 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGF-RFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP-------YWLIKNSWGENWGDHGYFKMEMG---KNMCGIATCAS 736
            GGL + AF Y++  GGL++E+ YPYTG DG CKF    +   V    N ++ + DE Q +  L++   +A  +   + + Y  GV     CG     ++H V+ VGYG     P       YW+IKNSWGENWG++GY+K+  G   +N CG+ +  S
Sbjct:  210 GGLMTTAFSYLQKAGGLESEKDYPYTGSDGKCKFDKSKIVASVQ---NFSVVSVDEAQISANLIKHGPLAIGINAAYMQTYIGGVSCPYICGR---HLDHGVLLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMVS 361          
BLAST of DN621643 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.784e-22
Identity = 55/142 (38.73%), Postives = 80/142 (56.34%), Query Frame = -3
Query:  311 GGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 736
            GGL   AFE I   GG+  E  YPY   +  C+ +S    VQV D        E++L+  + LV P+ +A +  D    YK G+     C N+ +  NHAV+ VGYGVE+ +PYW  KN+WG +WG+ G+F+++   N CG+
Sbjct:  176 GGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNSNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVN-YKQGIIKY--CFNSGL--NHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGM 312          
The following BLAST results are available for this feature:
BLAST of DN621643 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 180
Match NameE-valueIdentityDescription
CATLL_PHACE1.613e-2336.77Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CYSP1_DICDI2.107e-2335.85Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CATV_GVCP3.594e-2342.25Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
XCP1_ARATH4.694e-2339.61Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
CATV_NPVCD4.694e-2338.73Viral cathepsin OS=Choristoneura fumiferana defect... [more]
CATV_NPVLD6.130e-2338.96Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CPR3_ARATH1.046e-2239.74Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CATV_NPVAP1.046e-2237.32Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
CYSP1_MAIZE1.784e-2237.34Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CATV_NPVAC1.784e-2238.73Viral cathepsin OS=Autographa californica nuclear ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621643 ID=DN621643; Name=DN621643; organism=Citrus sinensis; type=EST; length=738bp
TTTTTTTTCCTATAACAACTACCTTGCATTGACAAAATATATATAACATC
GTTGGTGTCCTAGTCACAATGACTGTTTACATGGACATAGATCTCAGAAT
TTATTTTGAACATCAAGCAGCCATGCATTGCTATTGTAGATTATATGGAC
ATTAATCTCCGAATTTATTTCGTACATAAAGCCAACCATTCTGCTATCAT
TCTTGAGTGAAATAATATAAGTTTTATGAGCAAATGACTTGCTGATAGCC
AGATCCAACTATTTCTTCAGGAGCAGACTAAGCCACAACTGGGTATGATG
CACAAGTTGCAATACCACACATGTTCTTCCCCATCTCCATCTTAAAGTAG
CCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCTTAATCAGCCAATATGG
AACACCATCTTCAACTCCGTACCCAACAGCAACGACGGCATGGTTCACAT
CCATGGGAGTATTTCCACATTTAGTGCTGCTGTAAACTCCACTCTTGTAA
AATCGGAATCCATCTACTACTTCAAATGCCACACTCACAGGTCGAACAAG
ACCAACTGCATGCTGTAATTCATCTTCAGCACCCAAGGTAATGTTGACTG
AGTCCAGGACTTGGACGCCAACATTTTCAGATGAGAATTTGCAGACACCA
TCTTTTCCGGTGTAGGGATATGCTTCCTCAGTATCAAGGCCACCATTGTA
CTTGATGTATTCAAAGGCTTGGGATGGCAACCCACCAT
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