DN621642

Overview
NameDN621642
Unique NameDN621642
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length214
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2889 contig Csv1_Contig2889:141..354. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_LUPPO (Heat shock 70 kDa protein (Fragment) OS=Lupinus polyphyllus PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 9.051e-25
Identity = 54/70 (77.14%), Postives = 61/70 (87.14%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLSK++IEKMVQE EKYKAEDEE KKKV+ KNALENYAY+MRNT+ D+KI SKL   DKKKIED +
Sbjct:  119 NDKGRLSKEDIEKMVQEVEKYKAEDEEVKKKVDTKNALENYAYSMRNTITDDKITSKLPTEDKKKIEDTV 188          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP71_PUCGR (Heat shock protein HSS1 OS=Puccinia graminis GN=HSS1 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.465e-22
Identity = 47/70 (67.14%), Postives = 60/70 (85.71%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLSK+EIE+MV EAEKYKAEDEE   ++ ++NALE+YAYN+RN++ DEK+  K D ADKKK+EDA+
Sbjct:  503 NDKGRLSKEEIERMVNEAEKYKAEDEEATARITSRNALESYAYNLRNSLTDEKLADKFDAADKKKLEDAV 572          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.465e-22
Identity = 48/70 (68.57%), Postives = 60/70 (85.71%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLSK+EIE+MV+EAEKYK EDE+  KK+EAKN+LENYAYN+RNTV+DEK+  K+   DKK IE+ +
Sbjct:  511 NDKGRLSKEEIERMVEEAEKYKTEDEKLDKKLEAKNSLENYAYNIRNTVRDEKLKEKIQEEDKKSIEEKV 580          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_CHLRE (Heat shock 70 kDa protein OS=Chlamydomonas reinhardtii GN=HSP70 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 3.219e-22
Identity = 49/70 (70.00%), Postives = 63/70 (90.00%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLSKDEIE+MVQEAEKYKA+DE+  KKVEAKN+LENYAYNMRNT++++K+ S+L  +DK+ +E A+
Sbjct:  511 NDKGRLSKDEIERMVQEAEKYKADDEQ-LKKVEAKNSLENYAYNMRNTIREDKVASQLSASDKESMEKAL 579          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.219e-22
Identity = 46/70 (65.71%), Postives = 60/70 (85.71%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRL+KD+IE+MVQEAEKYK+EDE +  ++EAKN LENYAYN+RNT+ DEK+  K+D +DKK I+D +
Sbjct:  508 NDKGRLTKDDIERMVQEAEKYKSEDEANNVRIEAKNGLENYAYNLRNTLNDEKLQGKIDESDKKVIDDKV 577          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_BRUMA (Heat shock 70 kDa protein OS=Brugia malayi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.648e-21
Identity = 45/68 (66.18%), Postives = 58/68 (85.29%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSKDEIE+MVQEAEKYKA+DE  K ++ AKNALE+YA+NM+ T++DEK+  K+   DKKKI++
Sbjct:  504 NDKGRLSKDEIERMVQEAEKYKADDEAQKDRIAAKNALESYAFNMKQTIEDEKLKDKISEEDKKKIQE 571          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 6.071e-21
Identity = 44/68 (64.71%), Postives = 57/68 (83.82%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSKD+IE+MV EAEKYKA+DE  K ++ AKN LE+YA+N++ T++DEK+  K+ P DKKKIED
Sbjct:  506 NDKGRLSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKISPEDKKKIED 573          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.766e-20
Identity = 44/70 (62.86%), Postives = 57/70 (81.43%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLSK+EIE+MV EAEKYK EDEE   +++AKN LE+YAYN+RNT+ D+K+  K+D ADK+ +  AI
Sbjct:  508 NDKGRLSKEEIERMVAEAEKYKKEDEEAASRIQAKNGLESYAYNLRNTLNDDKVAGKMDAADKETLNKAI 577          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP71_PONAB (Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.935e-20
Identity = 45/68 (66.18%), Postives = 58/68 (85.29%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSK+EIE+MVQEAEKYKAEDE  +++V AKNALE+YA+NM++ V+DE +  K+  ADKKK+ D
Sbjct:  505 NDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLD 572          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP71_HUMAN (Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5)

HSP 1 Score: 96.6709 bits (239), Expect = 3.935e-20
Identity = 45/68 (66.18%), Postives = 58/68 (85.29%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSK+EIE+MVQEAEKYKAEDE  +++V AKNALE+YA+NM++ V+DE +  K+  ADKKK+ D
Sbjct:  505 NDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLD 572          
The following BLAST results are available for this feature:
BLAST of DN621642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
HSP70_LUPPO9.051e-2577.14Heat shock 70 kDa protein (Fragment) OS=Lupinus po... [more]
HSP71_PUCGR2.465e-2267.14Heat shock protein HSS1 OS=Puccinia graminis GN=HS... [more]
HSP70_PYRSA2.465e-2268.57Heat shock 70 kDa protein OS=Pyrenomonas salina GN... [more]
HSP70_CHLRE3.219e-2270.00Heat shock 70 kDa protein OS=Chlamydomonas reinhar... [more]
HSP70_ACHKL3.219e-2265.71Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]
HSP70_BRUMA4.648e-2166.18Heat shock 70 kDa protein OS=Brugia malayi GN=HSP7... [more]
HSP7A_CAEEL6.071e-2164.71Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HSP70_BLAEM1.766e-2062.86Heat shock 70 kDa protein OS=Blastocladiella emers... [more]
HSP71_PONAB3.935e-2066.18Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSP... [more]
HSP71_HUMAN3.935e-2066.18Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621642 ID=DN621642; Name=DN621642; organism=Citrus sinensis; type=EST; length=214bp
CCAACGACAAGGGTAGATTGTCAAAGGATGAAATTGAGAAGATGGTTCAA
GAGGCCGAGAAGTACAAGGCTGAAGATGAGGAGCACAAGAAGAAGGTCGA
GGCCAAGAATGCCTTGGAAAACTATGCCTACAATATGAGGAACACTGTCA
AGGACGAGAAGATCGGCTCCAAACTTGATCCAGCTGACAAGAAGAAGATT
GAGGATGCCATTGA
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