DN621642

Overview
NameDN621642
Unique NameDN621642
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length214
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: GRP78_ASPNG (78 kDa glucose-regulated protein homolog OS=Aspergillus niger GN=bipA PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.501e-15
Identity = 37/71 (52.11%), Postives = 55/71 (77.46%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEK-IGSKLDPADKKKIEDAI 212
            NDKGRLS++EI++MV EAE++  ED+  K K+EA+N LENYA++++N V DE  +G ++D  DK+ I DA+
Sbjct:  547 NDKGRLSQEEIDRMVAEAEEFAEEDKAIKAKIEARNTLENYAFSLKNQVNDENGLGGQIDEDDKQTILDAV 617          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: GRP78_ASPKA (78 kDa glucose-regulated protein homolog OS=Aspergillus kawachi GN=bipA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.501e-15
Identity = 37/71 (52.11%), Postives = 55/71 (77.46%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEK-IGSKLDPADKKKIEDAI 212
            NDKGRLS++EI++MV EAE++  ED+  K K+EA+N LENYA++++N V DE  +G ++D  DK+ I DA+
Sbjct:  547 NDKGRLSQEEIDRMVAEAEEFAEEDKAIKAKIEARNTLENYAFSLKNQVNDENGLGGQIDEDDKQTILDAV 617          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: GRP78_ASPAW (78 kDa glucose-regulated protein homolog OS=Aspergillus awamori GN=bipA PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.501e-15
Identity = 37/71 (52.11%), Postives = 55/71 (77.46%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEK-IGSKLDPADKKKIEDAI 212
            NDKGRLS++EI++MV EAE++  ED+  K K+EA+N LENYA++++N V DE  +G ++D  DK+ I DA+
Sbjct:  547 NDKGRLSQEEIDRMVAEAEEFAEEDKAIKAKIEARNTLENYAFSLKNQVNDENGLGGQIDEDDKQTILDAV 617          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_THEPA (Heat shock 70 kDa protein OS=Theileria parva GN=TP02_0148 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 8.491e-15
Identity = 34/58 (58.62%), Postives = 50/58 (86.21%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKL 176
            NDKGRLS++EI++MV+EAEKYK EDE+ +K VE+K+ LENY Y+M+NT+ ++++  KL
Sbjct:  506 NDKGRLSQEEIDRMVEEAEKYKEEDEKRRKCVESKHKLENYCYSMKNTLSEDQVKQKL 563          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 1.448e-14
Identity = 34/68 (50.00%), Postives = 52/68 (76.47%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSK++IE+MV EAEKY+ EDE+ K+ + AKN LE+Y +NM+ T+ ++ + +K+  +D+  I D
Sbjct:  505 NDKGRLSKEDIERMVNEAEKYRNEDEKQKETIAAKNGLESYCFNMKATLDEDNLKTKISDSDRTTILD 572          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP7A_DROME (Heat shock 70 kDa protein cognate 1 OS=Drosophila melanogaster GN=Hsc70-1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.448e-14
Identity = 32/67 (47.76%), Postives = 51/67 (76.12%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIE 203
            NDKGRLSK++IE+MV +AE Y+  DE+ + ++ AKN LE+Y + +R+T+ DE + S+  PAD++ I+
Sbjct:  505 NDKGRLSKEDIERMVNDAEAYRQADEQQRDRINAKNQLESYCFQLRSTLDDEHLSSRFSPADRETIQ 571          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP76_SAGOE (Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.448e-14
Identity = 32/68 (47.06%), Postives = 54/68 (79.41%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSK+E+E+MV+EAE+YKAEDE  + +V AKN+LE + ++++ ++++E +  K+   D+ K++D
Sbjct:  507 NDKGRLSKEEVERMVREAEQYKAEDEAQRDRVAAKNSLETHVFHVKGSLQEESLRDKIPKEDRHKVQD 574          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.448e-14
Identity = 34/70 (48.57%), Postives = 52/70 (74.29%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLSK+EI++MV EAEKYK EDE+   ++ AKN LE+YAY+++ T  +++   K+D + ++ +  AI
Sbjct:  505 NDKGRLSKEEIDRMVAEAEKYKEEDEKEAARIAAKNGLESYAYSLKQTASEKQFEEKVDASKRESLNKAI 574          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP76_HUMAN (Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSPA6 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 2.470e-14
Identity = 32/68 (47.06%), Postives = 54/68 (79.41%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSK+E+E+MV EAE+YKAEDE  + +V AKN+LE + ++++ ++++E +  K+   D++K++D
Sbjct:  507 NDKGRLSKEEVERMVHEAEQYKAEDEAQRDRVAAKNSLEAHVFHVKGSLQEESLRDKIPEEDRRKMQD 574          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP74_PARLI (Heat shock 70 kDa protein IV OS=Paracentrotus lividus GN=HSP70IV PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.470e-14
Identity = 32/70 (45.71%), Postives = 51/70 (72.86%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            ND  RLSKD+I++M+ +AE++KAED+  ++++ AKN LE YA+N+++ V D    SKL P DK+ +  A+
Sbjct:  505 NDSDRLSKDDIDRMINDAERFKAEDDAQRERINAKNQLEGYAFNLKSAVDDAAAQSKLSPGDKETVTKAV 574          
The following BLAST results are available for this feature:
BLAST of DN621642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
GRP78_ASPNG6.501e-1552.1178 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASPKA6.501e-1552.1178 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASPAW6.501e-1552.1178 kDa glucose-regulated protein homolog OS=Asperg... [more]
HSP70_THEPA8.491e-1558.62Heat shock 70 kDa protein OS=Theileria parva GN=TP... [more]
HSP7D_DROME1.448e-1450.00Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HSP7A_DROME1.448e-1447.76Heat shock 70 kDa protein cognate 1 OS=Drosophila ... [more]
HSP76_SAGOE1.448e-1447.06Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN... [more]
HSP71_PICAN1.448e-1448.57Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 ... [more]
HSP76_HUMAN2.470e-1447.06Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSP... [more]
HSP74_PARLI2.470e-1445.71Heat shock 70 kDa protein IV OS=Paracentrotus livi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621642 ID=DN621642; Name=DN621642; organism=Citrus sinensis; type=EST; length=214bp
CCAACGACAAGGGTAGATTGTCAAAGGATGAAATTGAGAAGATGGTTCAA
GAGGCCGAGAAGTACAAGGCTGAAGATGAGGAGCACAAGAAGAAGGTCGA
GGCCAAGAATGCCTTGGAAAACTATGCCTACAATATGAGGAACACTGTCA
AGGACGAGAAGATCGGCTCCAAACTTGATCCAGCTGACAAGAAGAAGATT
GAGGATGCCATTGA
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