DN621642

Overview
NameDN621642
Unique NameDN621642
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length214
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP72_YEAST (Heat shock protein SSA2 OS=Saccharomyces cerevisiae GN=SSA2 PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 2.470e-14
Identity = 39/74 (52.70%), Postives = 55/74 (74.32%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADK----KKIEDAI 212
            NDKGRLSK++IEKMV EAEK+K EDE+  +++ +KN LE+ AY+++NT+ +   G KL+ ADK    KK E+ I
Sbjct:  502 NDKGRLSKEDIEKMVAEAEKFKEEDEKESQRIASKNQLESIAYSLKNTISE--AGDKLEQADKDAVTKKAEETI 573          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 77.411 bits (189), Expect = 2.470e-14
Identity = 39/74 (52.70%), Postives = 55/74 (74.32%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADK----KKIEDAI 212
            NDKGRLSK++IEKMV EAEK+K EDE+  +++ +KN LE+ AY+++NT+ +   G KL+ ADK    KK E+ I
Sbjct:  502 NDKGRLSKEDIEKMVAEAEKFKEEDEKESQRIASKNQLESIAYSLKNTISE--AGDKLEQADKDTVTKKAEETI 573          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_SCHJA (Heat shock 70 kDa protein (Fragment) OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.226e-14
Identity = 31/64 (48.44%), Postives = 53/64 (82.81%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKK 194
            NDKGRLSK+EI++M+ EA++YK+EDE+ K ++ AKN+LE+Y Y+M+ +V+ +++  K+  +D+K
Sbjct:   60 NDKGRLSKEEIDRMINEADRYKSEDEKQKNRICAKNSLESYVYSMKQSVEGDEMKDKISESDRK 123          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_THEAN (Heat shock 70 kDa protein OS=Theileria annulata GN=TA11610 PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 4.214e-14
Identity = 32/58 (55.17%), Postives = 50/58 (86.21%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKL 176
            NDKGRLS++EI++MV+EAEKYK EDE+ ++ VE+++ LENY Y+M+NT+ ++++  KL
Sbjct:  506 NDKGRLSQEEIDRMVEEAEKYKEEDEKRRRCVESRHKLENYCYSMKNTLSEDQVKQKL 563          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: GRP78_ASHGO (78 kDa glucose-regulated protein homolog OS=Ashbya gossypii GN=KAR2 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.214e-14
Identity = 37/69 (53.62%), Postives = 54/69 (78.26%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDA 209
            N+KGRLSKD+IE+MV EAE Y+ EDEE + KVEA++ LENYA++++N V  + +G KL+  DK+ + +A
Sbjct:  544 NEKGRLSKDDIERMVAEAENYQKEDEEIRAKVEARHKLENYAHSLKNQVNGD-LGDKLEEDDKETLLEA 611          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP75_DROME (Major heat shock 70 kDa protein Bc OS=Drosophila melanogaster GN=Hsp70Bc PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.504e-14
Identity = 35/68 (51.47%), Postives = 52/68 (76.47%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLS+ EI++MV EAEKY  EDE+H++++ ++NALE+Y +N++ +V+    G KLD ADK  + D
Sbjct:  503 NDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQSVEQAPAG-KLDEADKNSVLD 569          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP74_DROME (Major heat shock 70 kDa protein Bbb OS=Drosophila melanogaster GN=Hsp70Bbb PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.504e-14
Identity = 35/68 (51.47%), Postives = 52/68 (76.47%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLS+ EI++MV EAEKY  EDE+H++++ ++NALE+Y +N++ +V+    G KLD ADK  + D
Sbjct:  503 NDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQSVEQAPAG-KLDEADKNSVLD 569          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP73_DROME (Major heat shock 70 kDa protein Bb OS=Drosophila melanogaster GN=Hsp70Bb PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.504e-14
Identity = 35/68 (51.47%), Postives = 52/68 (76.47%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLS+ EI++MV EAEKY  EDE+H++++ ++NALE+Y +N++ +V+    G KLD ADK  + D
Sbjct:  503 NDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQSVEQAPAG-KLDEADKNSVLD 569          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP72_DROME (Major heat shock 70 kDa protein Ba OS=Drosophila melanogaster GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.504e-14
Identity = 35/68 (51.47%), Postives = 52/68 (76.47%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLS+ EI++MV EAEKY  EDE+H++++ ++NALE+Y +N++ +V+    G KLD ADK  + D
Sbjct:  503 NDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQSVEQAPAG-KLDEADKNSVLD 569          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.188e-14
Identity = 33/69 (47.83%), Postives = 51/69 (73.91%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDA 209
            NDKGRLS++EIE+MV EAEKYK EDE+  K++ AKN LE+YAY+++ T  +++   K++ + ++    A
Sbjct:  503 NDKGRLSQEEIERMVSEAEKYKEEDEKEAKRIAAKNGLESYAYSLKQTTSEKQFEEKVEASKREAFTKA 571          
The following BLAST results are available for this feature:
BLAST of DN621642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
HSP72_YEAST2.470e-1452.70Heat shock protein SSA2 OS=Saccharomyces cerevisia... [more]
HSP71_YEAST2.470e-1452.70Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
HSP70_SCHJA3.226e-1448.44Heat shock 70 kDa protein (Fragment) OS=Schistosom... [more]
HSP70_THEAN4.214e-1455.17Heat shock 70 kDa protein OS=Theileria annulata GN... [more]
GRP78_ASHGO4.214e-1453.6278 kDa glucose-regulated protein homolog OS=Ashbya... [more]
HSP75_DROME5.504e-1451.47Major heat shock 70 kDa protein Bc OS=Drosophila m... [more]
HSP74_DROME5.504e-1451.47Major heat shock 70 kDa protein Bbb OS=Drosophila ... [more]
HSP73_DROME5.504e-1451.47Major heat shock 70 kDa protein Bb OS=Drosophila m... [more]
HSP72_DROME5.504e-1451.47Major heat shock 70 kDa protein Ba OS=Drosophila m... [more]
HSP72_PICAN7.188e-1447.83Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621642 ID=DN621642; Name=DN621642; organism=Citrus sinensis; type=EST; length=214bp
CCAACGACAAGGGTAGATTGTCAAAGGATGAAATTGAGAAGATGGTTCAA
GAGGCCGAGAAGTACAAGGCTGAAGATGAGGAGCACAAGAAGAAGGTCGA
GGCCAAGAATGCCTTGGAAAACTATGCCTACAATATGAGGAACACTGTCA
AGGACGAGAAGATCGGCTCCAAACTTGATCCAGCTGACAAGAAGAAGATT
GAGGATGCCATTGA
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