DN621642

Overview
NameDN621642
Unique NameDN621642
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length214
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP71_DROME (Major heat shock 70 kDa protein Ab OS=Drosophila melanogaster GN=Hsp70Ab PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 7.188e-14
Identity = 35/68 (51.47%), Postives = 51/68 (75.00%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLS+ EI++MV EAEKY  EDE+H++++ ++NALE+Y +N++  V+    G KLD ADK  + D
Sbjct:  503 NDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQAVEQAPAG-KLDEADKNSVLD 569          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_DROME (Major heat shock 70 kDa protein Aa OS=Drosophila melanogaster GN=Hsp70Aa PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.188e-14
Identity = 35/68 (51.47%), Postives = 51/68 (75.00%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLS+ EI++MV EAEKY  EDE+H++++ ++NALE+Y +N++  V+    G KLD ADK  + D
Sbjct:  503 NDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQAVEQAPAG-KLDEADKNSVLD 569          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: GRP78_RAT (78 kDa glucose-regulated protein OS=Rattus norvegicus GN=Hspa5 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.188e-14
Identity = 33/71 (46.48%), Postives = 55/71 (77.46%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAI 212
            ND+ RL+ +EIE+MV +AEK+  ED++ K++++ +N LE+YAY+++N + D EK+G KL P DK+ +E A+
Sbjct:  528 NDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSPEDKETMEKAV 598          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFO (78 kDa glucose-regulated protein homolog OS=Plasmodium falciparum (isolate NF54) PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.388e-14
Identity = 36/71 (50.70%), Postives = 53/71 (74.65%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAI 212
            NDKGRLSK++IEKM+ +AEK+  ED+  ++KVEAKN L+NY  +M+ TV+D +K+  K++  DK  I  A+
Sbjct:  527 NDKGRLSKEQIEKMINDAEKFADEDKNLREKVEAKNKLDNYIQSMKATVEDKDKLADKIEKEDKNTILSAV 597          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: GRP78_CHICK (78 kDa glucose-regulated protein OS=Gallus gallus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.388e-14
Identity = 34/71 (47.89%), Postives = 55/71 (77.46%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAI 212
            ND+ RL+ +EIE+MV +AEK+  ED++ K++++A+N LE+YAY+++N + D EK+G KL   DK+ IE A+
Sbjct:  526 NDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDARNELESYAYSLKNQIGDKEKLGGKLSSEDKETIEKAV 596          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP76_PIG (Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.226e-13
Identity = 31/68 (45.59%), Postives = 52/68 (76.47%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSK+E+E+MV+EA++YK EDE  + +V AKN+LE Y ++++ ++ +E +  K+   D+ K++D
Sbjct:  507 NDKGRLSKEEVERMVREADEYKVEDEAQRDRVAAKNSLEAYVFHVKGSLHEESLRDKIPEEDRCKVQD 574          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: GRP78_YEAST (78 kDa glucose-regulated protein homolog OS=Saccharomyces cerevisiae GN=KAR2 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.226e-13
Identity = 35/69 (50.72%), Postives = 54/69 (78.26%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDA 209
            NDKGRL+++EI++MV+EAEK+ +ED   K KVE++N LENYA++++N V  + +G KL+  DK+ + DA
Sbjct:  548 NDKGRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLENYAHSLKNQVNGD-LGEKLEEEDKETLLDA 615          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFA (78 kDa glucose-regulated protein homolog (Fragment) OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.226e-13
Identity = 36/71 (50.70%), Postives = 53/71 (74.65%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAI 212
            NDKGRLSK++IEKM+ +AEK+  ED+  ++KVEAKN L+NY  +M+ TV+D +K+  K++  DK  I  A+
Sbjct:  151 NDKGRLSKEQIEKMINDAEKFADEDKNLREKVEAKNNLDNYIQSMKATVEDKDKLADKIEKEDKNTILSAV 221          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_SCHMA (Heat shock 70 kDa protein homolog OS=Schistosoma mansoni PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.601e-13
Identity = 38/74 (51.35%), Postives = 54/74 (72.97%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKK----KIEDAI 212
            NDKGRLSK+EIE+MV +A+KYKAEDE+ + +V AKN+LE+Y Y M+  V+ E +  K+  +D++    K ED I
Sbjct:  503 NDKGRLSKEEIERMVADADKYKAEDEKQRDRVSAKNSLESYVYTMKQQVEGE-LKEKIPESDRQVIISKCEDTI 575          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP72_USTMA (Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=UMS2 PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.091e-13
Identity = 31/70 (44.29%), Postives = 53/70 (75.71%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLS ++IE+M+++AE++  ED++  ++ +AKN LE+Y YN+RNT  + ++  KL+ ADK+ +E  +
Sbjct:  503 NDKGRLSSEQIEEMLKQAEQFAEEDKQALERTQAKNGLESYIYNVRNTTNEPQLKDKLEAADKEALEKIV 572          
The following BLAST results are available for this feature:
BLAST of DN621642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
HSP71_DROME7.188e-1451.47Major heat shock 70 kDa protein Ab OS=Drosophila m... [more]
HSP70_DROME7.188e-1451.47Major heat shock 70 kDa protein Aa OS=Drosophila m... [more]
GRP78_RAT7.188e-1446.4878 kDa glucose-regulated protein OS=Rattus norvegi... [more]
GRP78_PLAFO9.388e-1450.7078 kDa glucose-regulated protein homolog OS=Plasmo... [more]
GRP78_CHICK9.388e-1447.8978 kDa glucose-regulated protein OS=Gallus gallus ... [more]
HSP76_PIG1.226e-1345.59Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6... [more]
GRP78_YEAST1.226e-1350.7278 kDa glucose-regulated protein homolog OS=Saccha... [more]
GRP78_PLAFA1.226e-1350.7078 kDa glucose-regulated protein homolog (Fragment... [more]
HSP70_SCHMA1.601e-1351.35Heat shock 70 kDa protein homolog OS=Schistosoma m... [more]
HSP72_USTMA2.091e-1344.29Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621642 ID=DN621642; Name=DN621642; organism=Citrus sinensis; type=EST; length=214bp
CCAACGACAAGGGTAGATTGTCAAAGGATGAAATTGAGAAGATGGTTCAA
GAGGCCGAGAAGTACAAGGCTGAAGATGAGGAGCACAAGAAGAAGGTCGA
GGCCAAGAATGCCTTGGAAAACTATGCCTACAATATGAGGAACACTGTCA
AGGACGAGAAGATCGGCTCCAAACTTGATCCAGCTGACAAGAAGAAGATT
GAGGATGCCATTGA
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