DN621642

Overview
NameDN621642
Unique NameDN621642
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length214
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2889 contig Csv1_Contig2889:141..354. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.495e-19
Identity = 43/68 (63.24%), Postives = 57/68 (83.82%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSKD+I++MVQEAEKYKAEDE ++ +V AKN+LE+Y YNM+ TV+DEK+  K+   DK+K+ D
Sbjct:  508 NDKGRLSKDDIDRMVQEAEKYKAEDEANRDRVGAKNSLESYTYNMKQTVEDEKLKGKISDQDKQKVLD 575          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 1.953e-19
Identity = 42/70 (60.00%), Postives = 56/70 (80.00%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLSK+EIE+M+ EAEKYKAEDE    ++ AKN LE+YAY++RNT+ D K+  KLD +DK+K++  I
Sbjct:  504 NDKGRLSKEEIERMLAEAEKYKAEDEAEASRISAKNGLESYAYSLRNTISDSKVDEKLDASDKEKLKTEI 573          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP71_PARBA (Heat shock 70 kDa protein 1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-1 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.953e-19
Identity = 42/70 (60.00%), Postives = 56/70 (80.00%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLSK+EIE+M+ EAEKYKAEDE    ++ AKN LE+YAY++RNT+ D K+  KLD +DK+K++  I
Sbjct:  502 NDKGRLSKEEIERMLAEAEKYKAEDEAEASRISAKNGLESYAYSLRNTISDSKVDEKLDASDKEKLKTEI 571          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.551e-19
Identity = 44/68 (64.71%), Postives = 56/68 (82.35%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSK++IE+MVQEAEKYKAED+  + KV AKN LE+YA+NM++TV+DEK+  K+   DK KI D
Sbjct:  505 NDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKHKILD 572          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HS71L_RAT (Heat shock 70 kDa protein 1-like OS=Rattus norvegicus GN=Hspa1l PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 2.551e-19
Identity = 44/68 (64.71%), Postives = 57/68 (83.82%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSK+EIE+MVQEAE+YKAEDE  ++K+ AKNALE+YA+NM++ V DE +  K+  +DKKKI D
Sbjct:  507 NDKGRLSKEEIERMVQEAERYKAEDEGQREKIAAKNALESYAFNMKSAVGDEGLKDKISESDKKKILD 574          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HS71L_MOUSE (Heat shock 70 kDa protein 1-like OS=Mus musculus GN=Hspa1l PE=2 SV=4)

HSP 1 Score: 93.9745 bits (232), Expect = 2.551e-19
Identity = 44/68 (64.71%), Postives = 57/68 (83.82%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSK+EIE+MVQEAE+YKAEDE  ++K+ AKNALE+YA+NM++ V DE +  K+  +DKKKI D
Sbjct:  507 NDKGRLSKEEIERMVQEAERYKAEDEGQREKIAAKNALESYAFNMKSAVGDEGLKDKISESDKKKILD 574          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 3.331e-19
Identity = 43/70 (61.43%), Postives = 56/70 (80.00%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLSK+EIE+M+ EAEK+K EDE   K+V AKN LE+YAY++RNT+ D K+  KLD ADK+K++  I
Sbjct:  504 NDKGRLSKEEIERMLAEAEKFKEEDEAEAKRVAAKNGLESYAYSLRNTLSDSKVDEKLDAADKEKLKSEI 573          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_HYDMA (Heat shock 70 kDa protein OS=Hydra magnipapillata GN=HSP70.1 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.331e-19
Identity = 43/66 (65.15%), Postives = 55/66 (83.33%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKI 200
            NDKGRLSK++IE+MVQEAEKYKA+DE  + KV+AKN+LE+Y YNM+ TV+DEK+  K+   DKK I
Sbjct:  512 NDKGRLSKEDIERMVQEAEKYKADDELQRDKVQAKNSLESYCYNMKQTVEDEKVKGKISEEDKKTI 577          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_ALTAL (Heat shock 70 kDa protein (Fragment) OS=Alternaria alternata GN=HSP70 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 4.351e-19
Identity = 42/66 (63.64%), Postives = 54/66 (81.82%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKI 200
            NDKGRLSK+EIE+M+ EAEKYKAEDE    ++ AKNALE+YAY++RNT+ D K+  KLD  DK+K+
Sbjct:    9 NDKGRLSKEEIERMLAEAEKYKAEDEAEAARISAKNALESYAYSLRNTLSDSKVDEKLDAGDKQKL 74          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_TRIRU (Heat shock 70 kDa protein OS=Trichophyton rubrum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.682e-19
Identity = 42/70 (60.00%), Postives = 56/70 (80.00%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLSK+EIE+M+ EAEKYKAEDE    ++ AKN LE+YAY+++NT+ D K+  KLD ADK+K++  I
Sbjct:  504 NDKGRLSKEEIERMLAEAEKYKAEDEAETARIGAKNGLESYAYSLKNTLSDSKVDEKLDAADKEKLKSEI 573          
The following BLAST results are available for this feature:
BLAST of DN621642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
HSP70_CHICK1.495e-1963.24Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]
HSP72_PARBA1.953e-1960.00Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
HSP71_PARBA1.953e-1960.00Heat shock 70 kDa protein 1 OS=Paracoccidioides br... [more]
HSP7C_ICTPU2.551e-1964.71Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HS71L_RAT2.551e-1964.71Heat shock 70 kDa protein 1-like OS=Rattus norvegi... [more]
HS71L_MOUSE2.551e-1964.71Heat shock 70 kDa protein 1-like OS=Mus musculus G... [more]
HSP70_NEUCR3.331e-1961.43Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
HSP70_HYDMA3.331e-1965.15Heat shock 70 kDa protein OS=Hydra magnipapillata ... [more]
HSP70_ALTAL4.351e-1963.64Heat shock 70 kDa protein (Fragment) OS=Alternaria... [more]
HSP70_TRIRU5.682e-1960.00Heat shock 70 kDa protein OS=Trichophyton rubrum G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621642 ID=DN621642; Name=DN621642; organism=Citrus sinensis; type=EST; length=214bp
CCAACGACAAGGGTAGATTGTCAAAGGATGAAATTGAGAAGATGGTTCAA
GAGGCCGAGAAGTACAAGGCTGAAGATGAGGAGCACAAGAAGAAGGTCGA
GGCCAAGAATGCCTTGGAAAACTATGCCTACAATATGAGGAACACTGTCA
AGGACGAGAAGATCGGCTCCAAACTTGATCCAGCTGACAAGAAGAAGATT
GAGGATGCCATTGA
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