DN621642

Overview
NameDN621642
Unique NameDN621642
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length214
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2889 contig Csv1_Contig2889:141..354. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.421e-19
Identity = 42/68 (61.76%), Postives = 56/68 (82.35%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSKD+I++MVQEAE+YK+EDE ++ +V AKNALE+Y YN++ TV+DEK+  K+   DK KI D
Sbjct:  508 NDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNALESYTYNIKQTVEDEKLRGKISEQDKNKILD 575          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 9.692e-19
Identity = 40/67 (59.70%), Postives = 56/67 (83.58%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIE 203
            NDKGRLSK+EIEKMV +AEK+K +DE+ K +VE+KN LENYA+ ++N++KDEK+ +K+  +DK  IE
Sbjct:  503 NDKGRLSKEEIEKMVADAEKFKQQDEQQKDRVESKNKLENYAFTVKNSIKDEKVAAKISDSDKSTIE 569          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.692e-19
Identity = 43/66 (65.15%), Postives = 55/66 (83.33%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKI 200
            NDKGRLSK+EIE+MV +AEKYKAEDE  ++K+ AKNALE+YA+NM++ V DE +  K+  ADKKKI
Sbjct:  507 NDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSAVSDEGLKGKISDADKKKI 572          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HS71L_MACFA (Heat shock 70 kDa protein 1-like OS=Macaca fascicularis GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.692e-19
Identity = 43/68 (63.24%), Postives = 56/68 (82.35%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSK+EIE+MV +AEKYKAEDE  ++K+ AKNALE+YA+NM++ V DE +  K+  +DKKKI D
Sbjct:  507 NDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSVVSDEGLKGKISESDKKKILD 574          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.653e-18
Identity = 41/68 (60.29%), Postives = 56/68 (82.35%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSKD+I++MVQEAE+YK+EDE ++ +V AKNA+E+Y YN++ TV+DEK+  K+   DK KI D
Sbjct:  508 NDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKNKILD 575          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP72_MOUSE (Heat shock-related 70 kDa protein 2 OS=Mus musculus GN=Hspa2 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.653e-18
Identity = 41/68 (60.29%), Postives = 56/68 (82.35%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSKD+I++MVQEAE+YK+EDE ++ +V AKNA+E+Y YN++ TV+DEK+  K+   DK KI D
Sbjct:  508 NDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKNKILD 575          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.653e-18
Identity = 41/68 (60.29%), Postives = 56/68 (82.35%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSKD+I++MVQEAE+YK+EDE ++ +V AKNA+E+Y YN++ TV+DEK+  K+   DK KI D
Sbjct:  508 NDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISDQDKNKILD 575          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.653e-18
Identity = 41/68 (60.29%), Postives = 56/68 (82.35%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSKD+I++MVQEAE+YK+EDE ++ +V AKNA+E+Y YN++ TV+DEK+  K+   DK KI D
Sbjct:  508 NDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISDQDKNKILD 575          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HS71L_BOVIN (Heat shock 70 kDa protein 1-like OS=Bos taurus GN=HSPA1L PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.159e-18
Identity = 42/66 (63.64%), Postives = 55/66 (83.33%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKI 200
            NDKGRLSK+EIE+MV +AEKYKAEDE  ++K+ AKNALE+YA+NM++ V DE +  K+  +DKKKI
Sbjct:  507 NDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSAVSDEGLQGKISESDKKKI 572          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_ONCMY (Heat shock cognate 70 kDa protein OS=Oncorhynchus mykiss GN=hsc71 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 2.820e-18
Identity = 41/66 (62.12%), Postives = 55/66 (83.33%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKI 200
            NDKGRLSK++IE+MVQEAEKYK ED+  + KV +KN+LE+YA+NM++TV+DEK+  K+   DK KI
Sbjct:  505 NDKGRLSKEDIERMVQEAEKYKCEDDVQRDKVSSKNSLESYAFNMKSTVEDEKLQGKISDEDKTKI 570          
The following BLAST results are available for this feature:
BLAST of DN621642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
HSP72_HUMAN7.421e-1961.76Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HS7C1_DICDI9.692e-1959.70Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]
HS71L_PIG9.692e-1965.15Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
HS71L_MACFA9.692e-1963.24Heat shock 70 kDa protein 1-like OS=Macaca fascicu... [more]
HSP72_RAT1.653e-1860.29Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]
HSP72_MOUSE1.653e-1860.29Heat shock-related 70 kDa protein 2 OS=Mus musculu... [more]
HSP72_CAPHI1.653e-1860.29Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]
HSP72_BOVIN1.653e-1860.29Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
HS71L_BOVIN2.159e-1863.64Heat shock 70 kDa protein 1-like OS=Bos taurus GN=... [more]
HSP70_ONCMY2.820e-1862.12Heat shock cognate 70 kDa protein OS=Oncorhynchus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621642 ID=DN621642; Name=DN621642; organism=Citrus sinensis; type=EST; length=214bp
CCAACGACAAGGGTAGATTGTCAAAGGATGAAATTGAGAAGATGGTTCAA
GAGGCCGAGAAGTACAAGGCTGAAGATGAGGAGCACAAGAAGAAGGTCGA
GGCCAAGAATGCCTTGGAAAACTATGCCTACAATATGAGGAACACTGTCA
AGGACGAGAAGATCGGCTCCAAACTTGATCCAGCTGACAAGAAGAAGATT
GAGGATGCCATTGA
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