DN621642

Overview
NameDN621642
Unique NameDN621642
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length214
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2889 contig Csv1_Contig2889:141..354. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.387e-17
Identity = 40/68 (58.82%), Postives = 55/68 (80.88%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRLSK+EIE+MVQEAE+YKA+DE  ++KV AKN LE+ A+NM++TV+ + +  K+   D+KKI D
Sbjct:  507 NDKGRLSKEEIERMVQEAERYKADDEAQREKVSAKNTLESIAFNMKSTVEGDNLKDKISEDDRKKIVD 574          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.387e-17
Identity = 40/70 (57.14%), Postives = 52/70 (74.29%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLSKDEIE+MV +A KY+A+D   + +VEAKN LENYAY+M+NT+ D  +  KLD +DK  +   I
Sbjct:  507 NDKGRLSKDEIERMVNDAMKYEADDRAQRDRVEAKNGLENYAYSMKNTLGDSNVSGKLDDSDKATLNKEI 576          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.387e-17
Identity = 38/68 (55.88%), Postives = 56/68 (82.35%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIED 206
            NDKGRL+ ++IEKMV++AE +KA+DE  ++ VE+KN LENYAY +R+T+KD+KI +KL   D+K +E+
Sbjct:  504 NDKGRLTAEQIEKMVKDAEMFKAQDEAQREVVESKNKLENYAYTVRSTIKDDKIAAKLSKEDRKTVEE 571          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 3.118e-17
Identity = 38/70 (54.29%), Postives = 56/70 (80.00%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLSK+EI++MV EAEKYKAEDE    +++AKN LE+YAY++RN++ D  +  K+D +DK+ ++ A+
Sbjct:  503 NDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAV 572          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_TRYCR (Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.118e-17
Identity = 38/70 (54.29%), Postives = 55/70 (78.57%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLS+ EIE+MV+EA KY+AED++  ++++AKN LENYA++M+N V D  +  K++ ADKK I  A+
Sbjct:  508 NDKGRLSRAEIERMVREAAKYEAEDKDQVRQIDAKNGLENYAFSMKNAVNDPNVAGKIEEADKKTITSAV 577          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.118e-17
Identity = 41/70 (58.57%), Postives = 56/70 (80.00%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLSK+EIE+M+ EAEKYKAEDE    +++AKN LE+YAY+++NT+ + K+  ++   DKKKIED I
Sbjct:  373 NDKGRLSKEEIERMLAEAEKYKAEDEAEASRIQAKNGLESYAYSLKNTITEGKL--QMSDDDKKKIEDKI 440          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.118e-17
Identity = 43/74 (58.11%), Postives = 55/74 (74.32%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADK----KKIEDAI 212
            NDKGRLSKDEIE+MV +A KY+A+D+    +VEAKN LENYAY+M+NT+ D  +  KLD  DK    K+IE A+
Sbjct:  508 NDKGRLSKDEIERMVNDAMKYEADDKAQADRVEAKNGLENYAYSMKNTLGDSNVSGKLDDTDKSTLNKEIEAAL 581          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 4.072e-17
Identity = 38/70 (54.29%), Postives = 52/70 (74.29%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLSK +IE+MV +A KY+AED+ H   ++AKN LENYA++M+NT+ D  +  KLD ADK  +  A+
Sbjct:  508 NDKGRLSKADIERMVSDAAKYEAEDKAHVXXIDAKNGLENYAFSMKNTINDPNVAGKLDDADKNAVTTAV 577          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.072e-17
Identity = 38/70 (54.29%), Postives = 54/70 (77.14%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLSK+EIE+M+ EAEKYKAEDE    ++  KN LE+YAY++RN+++  K+  KL+  DK+K++  I
Sbjct:  504 NDKGRLSKEEIERMLAEAEKYKAEDEAEASRIRPKNGLESYAYSLRNSLRHSKVDEKLEAGDKEKLKSEI 573          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP71_CANAL (Heat shock protein SSA1 OS=Candida albicans GN=SSA1 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 9.072e-17
Identity = 39/70 (55.71%), Postives = 55/70 (78.57%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLSK+EI+KMV EAEK+K EDE+   +V+AKN LE+YAY+++NT+ D ++  K+   DK+K+  AI
Sbjct:  504 NDKGRLSKEEIDKMVSEAEKFKEEDEKEAARVQAKNQLESYAYSLKNTINDGEMKDKIGADDKEKLTKAI 573          
The following BLAST results are available for this feature:
BLAST of DN621642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
HSP70_PLEWA2.387e-1758.82Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
HSP70_LEIDO2.387e-1757.14Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
HS7C2_DICDI2.387e-1755.88Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]
HSP72_SCHPO3.118e-1754.29Probable heat shock protein ssa2 OS=Schizosaccharo... [more]
HSP70_TRYCR3.118e-1754.29Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=... [more]
HSP70_PENCI3.118e-1758.57Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
HSP70_LEIAM3.118e-1758.11Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]
HSP74_TRYBB4.072e-1754.29Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP70_AJECA4.072e-1754.29Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
HSP71_CANAL9.072e-1755.71Heat shock protein SSA1 OS=Candida albicans GN=SSA... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_06P21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621642 ID=DN621642; Name=DN621642; organism=Citrus sinensis; type=EST; length=214bp
CCAACGACAAGGGTAGATTGTCAAAGGATGAAATTGAGAAGATGGTTCAA
GAGGCCGAGAAGTACAAGGCTGAAGATGAGGAGCACAAGAAGAAGGTCGA
GGCCAAGAATGCCTTGGAAAACTATGCCTACAATATGAGGAACACTGTCA
AGGACGAGAAGATCGGCTCCAAACTTGATCCAGCTGACAAGAAGAAGATT
GAGGATGCCATTGA
back to top