DN621642

Overview
NameDN621642
Unique NameDN621642
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length214
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2889 contig Csv1_Contig2889:141..354. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_CLAHE (Heat shock 70 kDa protein OS=Cladosporium herbarum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.072e-17
Identity = 39/70 (55.71%), Postives = 53/70 (75.71%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLSK+EIE+M+ +AEKYK EDE    +++AKN LE+YAY+++NTV D K+  KL   DK+ +  AI
Sbjct:  504 NDKGRLSKEEIERMLADAEKYKEEDEAEAGRIQAKNGLESYAYSLKNTVSDPKVEEKLSAEDKETLTGAI 573          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 1.185e-16
Identity = 39/69 (56.52%), Postives = 56/69 (81.16%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDA 209
            NDKGRLSK+EIEKMV EAEK+K EDE+   +V+AKN LE+YAY+++NT+ +E+  SKLD ++ +++  A
Sbjct:  503 NDKGRLSKEEIEKMVSEAEKFKEEDEKEASRVQAKNQLESYAYSLKNTLGEEQFKSKLDASEIEEVTKA 571          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: GRP78_DEBHA (78 kDa glucose-regulated protein homolog OS=Debaryomyces hansenii GN=KAR2 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.547e-16
Identity = 40/73 (54.79%), Postives = 58/73 (79.45%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEK---IGSKLDPADKKKIEDAI 212
            NDKGRLSK++I++MV+EAEKY  +D E K K+E++N+LENYA+ ++  VKDE    +GSKL+  DK+ ++DAI
Sbjct:  547 NDKGRLSKEDIDRMVEEAEKYAEQDSELKAKIESRNSLENYAHMLKGQVKDESENGLGSKLNDDDKETLDDAI 619          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP71_ORYLA (Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16
Identity = 35/66 (53.03%), Postives = 55/66 (83.33%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKI 200
            NDKGRLSK++IE+MVQEAEKYKAEDE+ + K+ AKN+LE+ A+N++++ +D+ +  K+   D+K++
Sbjct:  507 NDKGRLSKEDIERMVQEAEKYKAEDEQQRDKIAAKNSLESLAFNLKSSAQDDSLKDKISQEDRKRV 572          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_ECHGR (Heat shock cognate 70 kDa protein OS=Echinococcus granulosus GN=HSP70 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.447e-16
Identity = 36/65 (55.38%), Postives = 55/65 (84.62%), Query Frame = 3
Query:    6 DKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKI 200
            DKGRLSK+EIE+MV +AEK+K EDE+ + +V AKN LE+YA++M++TV+DEK+  K+  +D+++I
Sbjct:  508 DKGRLSKEEIERMVNDAEKFKQEDEKQRDRVAAKNGLESYAFSMKSTVEDEKVKEKIGESDRRRI 572          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_LEIBR (Heat shock 70 kDa protein (Fragment) OS=Leishmania braziliensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.880e-16
Identity = 38/70 (54.29%), Postives = 51/70 (72.86%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLSKDEIE+MV +A KY+  D+  +  +EAKN LENYAY+M+NTV D  +  KL+ +D+  +  AI
Sbjct:   82 NDKGRLSKDEIERMVNDASKYEQADKMQRDALEAKNGLENYAYSMKNTVSDTNVSGKLEESDRSALNLAI 151          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.880e-16
Identity = 37/70 (52.86%), Postives = 53/70 (75.71%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            ND+    + +I++MV EAEKYK+EDE +K ++EAKN LENY+YN+RNT+ DEK+  ++   DKK IED +
Sbjct:  508 NDRVVCRRHDIDRMVSEAEKYKSEDEANKIRIEAKNGLENYSYNLRNTLNDEKLKDQIPEDDKKAIEDKV 577          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: GRP78_PICAN (78 kDa glucose-regulated protein homolog OS=Pichia angusta GN=BiP PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.880e-16
Identity = 39/71 (54.93%), Postives = 57/71 (80.28%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEK-IGSKLDPADKKKIEDAI 212
            NDKGRLSK+EIEK ++EAEK+  +D+E ++KVE++NALENYA++++N   DE   G+KL+  DK+ + DAI
Sbjct:  538 NDKGRLSKEEIEKKIEEAEKFAQQDKELREKVESRNALENYAHSLKNQANDENGFGAKLEEDDKETLLDAI 608          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: BIP_SOLLC (Luminal-binding protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.880e-16
Identity = 38/70 (54.29%), Postives = 57/70 (81.43%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDA 209
            NDKGRLS++EIE+MV+EAE++  ED++ K+K++A+NALE Y YNM+N + D +K+  KL+  +K+KIE A
Sbjct:  537 NDKGRLSQEEIERMVREAEEFAEEDKKVKEKIDARNALETYVYNMKNQINDKDKLADKLESDEKEKIETA 606          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: BIP_SPIOL (Luminal-binding protein OS=Spinacia oleracea GN=HSC70 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.680e-16
Identity = 37/71 (52.11%), Postives = 58/71 (81.69%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAI 212
            NDKGRLS++EIE+MV+EAE++  ED++ K+K++A+N+LE Y YNM+N + D +K+  KL+  +K+KIE A+
Sbjct:  537 NDKGRLSQEEIERMVREAEEFAEEDKKVKEKIDARNSLETYIYNMKNQISDADKLADKLESDEKEKIEGAV 607          
The following BLAST results are available for this feature:
BLAST of DN621642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
HSP70_CLAHE9.072e-1755.71Heat shock 70 kDa protein OS=Cladosporium herbarum... [more]
HSP72_CANAL1.185e-1656.52Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
GRP78_DEBHA1.547e-1654.7978 kDa glucose-regulated protein homolog OS=Debary... [more]
HSP71_ORYLA2.021e-1653.03Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=... [more]
HSP70_ECHGR3.447e-1655.38Heat shock cognate 70 kDa protein OS=Echinococcus ... [more]
HSP70_LEIBR5.880e-1654.29Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
HSP70_BRELC5.880e-1652.86Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
GRP78_PICAN5.880e-1654.9378 kDa glucose-regulated protein homolog OS=Pichia... [more]
BIP_SOLLC5.880e-1654.29Luminal-binding protein OS=Solanum lycopersicum PE... [more]
BIP_SPIOL7.680e-1652.11Luminal-binding protein OS=Spinacia oleracea GN=HS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621642 ID=DN621642; Name=DN621642; organism=Citrus sinensis; type=EST; length=214bp
CCAACGACAAGGGTAGATTGTCAAAGGATGAAATTGAGAAGATGGTTCAA
GAGGCCGAGAAGTACAAGGCTGAAGATGAGGAGCACAAGAAGAAGGTCGA
GGCCAAGAATGCCTTGGAAAACTATGCCTACAATATGAGGAACACTGTCA
AGGACGAGAAGATCGGCTCCAAACTTGATCCAGCTGACAAGAAGAAGATT
GAGGATGCCATTGA
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