DN621642

Overview
NameDN621642
Unique NameDN621642
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length214
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEEL (Heat shock 70 kDa protein C OS=Caenorhabditis elegans GN=hsp-3 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.003e-15
Identity = 37/71 (52.11%), Postives = 56/71 (78.87%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAI 212
            ND+ RLS ++IE+M+ +AEK+  +D++ K K EA+N LE+YAYN++N ++D EK+G KLD  DKK IE+A+
Sbjct:  533 NDQNRLSPEDIERMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAV 603          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: GRP78_NEUCR (78 kDa glucose-regulated protein homolog OS=Neurospora crassa GN=grp78 PE=3 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 1.310e-15
Identity = 37/71 (52.11%), Postives = 56/71 (78.87%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEK-IGSKLDPADKKKIEDAI 212
            NDKGRL+++EI++MV EAEKY  ED+  ++++EA+N LENYA++++N V DE  +G K+D  DK+ I DA+
Sbjct:  537 NDKGRLTQEEIDRMVAEAEKYAEEDKATRERIEARNGLENYAFSLKNQVNDEDGLGGKIDEEDKETILDAV 607          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: BIP8_TOBAC (Luminal-binding protein 8 (Fragment) OS=Nicotiana tabacum GN=BIP8 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.310e-15
Identity = 37/70 (52.86%), Postives = 57/70 (81.43%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDA 209
            NDKGRLS++EIE+MV+EAE++  ED++ K++++A+N+LE Y YNMRN + D +K+  KL+  +K+KIE A
Sbjct:  164 NDKGRLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETA 233          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: BIP5_TOBAC (Luminal-binding protein 5 OS=Nicotiana tabacum GN=BIP5 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.310e-15
Identity = 37/70 (52.86%), Postives = 57/70 (81.43%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDA 209
            NDKGRLS++EIE+MV+EAE++  ED++ K++++A+N+LE Y YNMRN + D +K+  KL+  +K+KIE A
Sbjct:  537 NDKGRLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETA 606          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: BIP4_TOBAC (Luminal-binding protein 4 OS=Nicotiana tabacum GN=BIP4 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.310e-15
Identity = 37/70 (52.86%), Postives = 57/70 (81.43%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDA 209
            NDKGRLS++EIE+MV+EAE++  ED++ K++++A+N+LE Y YNMRN + D +K+  KL+  +K+KIE A
Sbjct:  538 NDKGRLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETA 607          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: BIP3_TOBAC (Luminal-binding protein 3 (Fragment) OS=Nicotiana tabacum GN=BIP3 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.711e-15
Identity = 36/71 (50.70%), Postives = 57/71 (80.28%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAI 212
            NDKGRLS++EIE+MV+EAE++  ED++ K++++A+N LE Y YNM+N + D +K+  KL+  +K+KIE A+
Sbjct:   40 NDKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNGLETYVYNMKNQINDKDKLADKLESDEKEKIETAV 110          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP74_YEAST (Heat shock protein SSA4 OS=Saccharomyces cerevisiae GN=SSA4 PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 2.234e-15
Identity = 36/69 (52.17%), Postives = 53/69 (76.81%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDA 209
            NDKGRLSK++I+KMV EAEK+KAEDE+  ++V+AKN LE+YA+ ++N+V +     K+   D +K+E A
Sbjct:  503 NDKGRLSKEDIDKMVAEAEKFKAEDEQEAQRVQAKNQLESYAFTLKNSVSENNFKEKVGEEDARKLEAA 571          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP73_YEAST (Heat shock protein SSA3 OS=Saccharomyces cerevisiae GN=SSA3 PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 2.234e-15
Identity = 35/69 (50.72%), Postives = 52/69 (75.36%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDA 209
            NDKGRLSKD+I++MV EAEKY+A+DE   ++V+AKN LE+YA+ ++NT+ +     K+   D K++E A
Sbjct:  503 NDKGRLSKDDIDRMVSEAEKYRADDEREAERVQAKNQLESYAFTLKNTINEASFKEKVGEDDAKRLETA 571          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.234e-15
Identity = 36/70 (51.43%), Postives = 55/70 (78.57%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 212
            NDKGRLSK++IE+M+ +AEKYKAEDE    +++AKN LE+YAY+++NT+ + ++  ++   DKKK+ D I
Sbjct:  503 NDKGRLSKEDIERMLADAEKYKAEDEAEAARIQAKNGLESYAYSLKNTISEGQL--QISEDDKKKVSDKI 570          
BLAST of DN621642 vs. ExPASy Swiss-Prot
Match: GRP78_YARLI (78 kDa glucose-regulated protein homolog OS=Yarrowia lipolytica GN=KAR2 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.234e-15
Identity = 38/71 (53.52%), Postives = 55/71 (77.46%), Query Frame = 3
Query:    3 NDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEK-IGSKLDPADKKKIEDAI 212
            NDKGRLSKDEIE+MV+EAE++  ED   ++ +EAKN+LENYA+++RN V D+  +G K+   DK+ + DA+
Sbjct:  535 NDKGRLSKDEIERMVEEAERFAEEDALIRETIEAKNSLENYAHSLRNQVADKSGLGGKISADDKEALNDAV 605          
The following BLAST results are available for this feature:
BLAST of DN621642 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
HSP7C_CAEEL1.003e-1552.11Heat shock 70 kDa protein C OS=Caenorhabditis eleg... [more]
GRP78_NEUCR1.310e-1552.1178 kDa glucose-regulated protein homolog OS=Neuros... [more]
BIP8_TOBAC1.310e-1552.86Luminal-binding protein 8 (Fragment) OS=Nicotiana ... [more]
BIP5_TOBAC1.310e-1552.86Luminal-binding protein 5 OS=Nicotiana tabacum GN=... [more]
BIP4_TOBAC1.310e-1552.86Luminal-binding protein 4 OS=Nicotiana tabacum GN=... [more]
BIP3_TOBAC1.711e-1550.70Luminal-binding protein 3 (Fragment) OS=Nicotiana ... [more]
HSP74_YEAST2.234e-1552.17Heat shock protein SSA4 OS=Saccharomyces cerevisia... [more]
HSP73_YEAST2.234e-1550.72Heat shock protein SSA3 OS=Saccharomyces cerevisia... [more]
HSP70_EMENI2.234e-1551.43Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
GRP78_YARLI2.234e-1553.5278 kDa glucose-regulated protein homolog OS=Yarrow... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06P21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621642 ID=DN621642; Name=DN621642; organism=Citrus sinensis; type=EST; length=214bp
CCAACGACAAGGGTAGATTGTCAAAGGATGAAATTGAGAAGATGGTTCAA
GAGGCCGAGAAGTACAAGGCTGAAGATGAGGAGCACAAGAAGAAGGTCGA
GGCCAAGAATGCCTTGGAAAACTATGCCTACAATATGAGGAACACTGTCA
AGGACGAGAAGATCGGCTCCAAACTTGATCCAGCTGACAAGAAGAAGATT
GAGGATGCCATTGA
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