DN621641

Overview
NameDN621641
Unique NameDN621641
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_COXB2 (Chaperone protein dnaK OS=Coxiella burnetii (strain CbuG_Q212) GN=dnaK PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.538e-12
Identity = 48/160 (30.00%), Postives = 81/160 (50.62%), Query Frame = -2
Query:  209 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSAAGPKIEEV 688
            ANGIL+VSA+DK TG++  I I    G LS +E+EKMV++AE ++  D +  + V+A+N  +   +    +VKD  +GS++   +K  IE  +++  + +  N   + D  E K K L    + +  ++Y                    + AG K E+V
Sbjct:  485 ANGILHVSAKDKATGKEQSIVIKASSG-LSDEEVEKMVKDAEAHRDSDRKFHELVDARNQADAMIHAAEKSVKD--LGSEVSADEKSAIEKVVNELKEAMKGN---DKDAIEAKRKALTEHSSKLAERVYAKKGGAAGAPPGGEAEGEPQAQAGGKKEDV 638          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_BURXL (Chaperone protein dnaK OS=Burkholderia xenovorans (strain LB400) GN=dnaK PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.538e-12
Identity = 46/130 (35.38%), Postives = 77/130 (59.23%), Query Frame = -2
Query:  299 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 688
            ANGIL+V A+DK TG++N+ITI  + G LS+ EIEKMV++AE    ED + ++  +A+N  +   ++ +  + +   G KL+  +K+KIE A+    + L S    +A   E K++ + +    +  KMY
Sbjct:  481 ANGILHVGAKDKATGKENRITIKANSG-LSEAEIEKMVKDAEANAEEDHKLRELADARNQGDALVHSTKKALTE--YGDKLEAGEKEKIESALKDLEETLKSGSSDKA-AIEAKIEVVATASQKMGEKMY 606          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_BURVG (Chaperone protein dnaK OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=dnaK PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.538e-12
Identity = 44/130 (33.85%), Postives = 80/130 (61.54%), Query Frame = -2
Query:  299 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 688
            ANGIL+V A+DK TG++NKITI  + G LS  EI++M+++AE   AED + ++  +++N  +   ++ +  + +   G KLD  +K+KIE A+ ++++ +  +  A+    + K++EL      +  KMY
Sbjct:  481 ANGILHVGAKDKATGKENKITIKANSG-LSDAEIDQMIKDAEANAAEDHKLRELADSRNQGDALVHSTKKALTE--YGDKLDAGEKEKIEAAL-KSLEDVLKDTSADKAAIDAKVEELGKASQKLGEKMY 606          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_BURCJ (Chaperone protein dnaK OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=dnaK PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.538e-12
Identity = 43/130 (33.08%), Postives = 81/130 (62.31%), Query Frame = -2
Query:  299 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 688
            ANGIL+V A+DK TG++NKITI  + G LS+ EI++M+++AE   AED + ++  +++N  +   ++ +  + +   G KLD  +K+ IE A+ ++++ +  +  A+    + K++EL  +   +  KMY
Sbjct:  481 ANGILHVGAKDKATGKENKITIKANSG-LSEAEIDQMIKDAEANAAEDHKLRELADSRNQGDALVHSTKKALTE--YGDKLDAGEKEAIEAAL-KSLEDVLKDTSADKAAIDAKVEELGKVSQKLGEKMY 606          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_BRUSU (Chaperone protein dnaK OS=Brucella suis GN=dnaK PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.538e-12
Identity = 46/131 (35.11%), Postives = 76/131 (58.02%), Query Frame = -2
Query:  296 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 688
            ANGI+NVSA+DK TG++++I I    G L+  +IEKMV++AE     D++ ++ VEAKN  E+  ++   ++ +   G K+   DKK IEDAI      L+     +A++ + K + L  +   +   MY+
Sbjct:  475 ANGIVNVSAKDKGTGKEHQIRI-QASGGLTDADIEKMVKDAEANAEADKKRRESVEAKNQAESLVHSTEKSLAE--YGDKVSADDKKAIEDAIAALKTSLEGE---DAEDIKAKTQALAEVSMKLGQAMYE 599          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_BORPD (Chaperone protein dnaK OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=dnaK PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.538e-12
Identity = 47/130 (36.15%), Postives = 74/130 (56.92%), Query Frame = -2
Query:  299 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 688
            ANGIL+VSA+DK TG++NKITI  + G LS+DEI++MV++AE    ED    +  + +N  +   +  R ++ +   G KL+ ++K+ IE AI +    L     A  D    K++ L +    +  KMY
Sbjct:  481 ANGILHVSAKDKGTGKENKITIKANSG-LSEDEIQRMVKDAEANAEEDHRIAELAQTRNQADALVHATRKSLTE--YGEKLEASEKEAIEGAIKELEDVLKDGDKAAIDA---KVEALSTASQKLGEKMY 604          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_BORBZ (Chaperone protein dnaK OS=Borrelia burgdorferi (strain ZS7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.538e-12
Identity = 43/131 (32.82%), Postives = 75/131 (57.25%), Query Frame = -2
Query:  296 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 688
            ANGI++VSA+D  TG++ KI I +  G LS+ EI++MV++AE +  ED++ K+ +EAKN   +  Y    ++K+     K+   DK+ IE  I +  + L+   ++     + + +EL+     I   MY+
Sbjct:  475 ANGIVHVSAKDMGTGKEQKIRIESSSG-LSESEIDRMVKDAEAHAEEDKKLKENIEAKNTANSLIYQTEKSLKE--YSEKISSEDKEAIESKIKELKESLEKEDIS---LIKSRTEELQKASYKIAEMMYK 599          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_BORBU (Chaperone protein dnaK OS=Borrelia burgdorferi GN=dnaK PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.538e-12
Identity = 43/131 (32.82%), Postives = 75/131 (57.25%), Query Frame = -2
Query:  296 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 688
            ANGI++VSA+D  TG++ KI I +  G LS+ EI++MV++AE +  ED++ K+ +EAKN   +  Y    ++K+     K+   DK+ IE  I +  + L+   ++     + + +EL+     I   MY+
Sbjct:  475 ANGIVHVSAKDMGTGKEQKIRIESSSG-LSESEIDRMVKDAEAHAEEDKKLKENIEAKNTANSLIYQTEKSLKE--YSEKISSEDKEAIESKIKELKESLEKEDIS---LIKSRTEELQKASYKIAEMMYK 599          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_ANOFW (Chaperone protein dnaK OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.538e-12
Identity = 41/131 (31.30%), Postives = 75/131 (57.25%), Query Frame = -2
Query:  296 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 688
            ANGI++V A+D  T ++  ITI +  G LS++EI++M++EAE+    D + K++VE +N  ++  +    T+K+  +  K+D AD KK ++A D     LD   +   ++   K   L+ +   +  K+Y+
Sbjct:  450 ANGIVHVRAKDLGTNKEQSITIKSSSG-LSEEEIQRMIKEAEENAEADRKRKEEVELRNEADHLIFTTEKTLKE--LEGKVDEADVKKAQEAKDALKAALDGKDI---EDIRAKKNALQEVVQQLSVKLYE 574          
BLAST of DN621641 vs. ExPASy Swiss-Prot
Match: DNAK_SILST (Chaperone protein dnaK OS=Silicibacter sp. (strain TM1040) GN=dnaK PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.315e-12
Identity = 40/93 (43.01%), Postives = 63/93 (67.74%), Query Frame = -2
Query:  410 ANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAI 688
            ANGI++VSA+DK TG++ KITI    G LS ++IEKMV++AE     D+E ++ +EA+N  E+  ++   +++D   G K+DP+  + IE AI
Sbjct:  476 ANGIVSVSAKDKGTGKEQKITI-QASGGLSDEDIEKMVKDAEDNAEADKERRELIEARNQAESLIHSTEKSIEDH--GDKVDPSTIEAIELAI 565          
The following BLAST results are available for this feature:
BLAST of DN621641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_COXB22.538e-1230.00Chaperone protein dnaK OS=Coxiella burnetii (strai... [more]
DNAK_BURXL2.538e-1235.38Chaperone protein dnaK OS=Burkholderia xenovorans ... [more]
DNAK_BURVG2.538e-1233.85Chaperone protein dnaK OS=Burkholderia vietnamiens... [more]
DNAK_BURCJ2.538e-1233.08Chaperone protein dnaK OS=Burkholderia cepacia (st... [more]
DNAK_BRUSU2.538e-1235.11Chaperone protein dnaK OS=Brucella suis GN=dnaK PE... [more]
DNAK_BORPD2.538e-1236.15Chaperone protein dnaK OS=Bordetella petrii (strai... [more]
DNAK_BORBZ2.538e-1232.82Chaperone protein dnaK OS=Borrelia burgdorferi (st... [more]
DNAK_BORBU2.538e-1232.82Chaperone protein dnaK OS=Borrelia burgdorferi GN=... [more]
DNAK_ANOFW2.538e-1231.30Chaperone protein dnaK OS=Anoxybacillus flavitherm... [more]
DNAK_SILST3.315e-1243.01Chaperone protein dnaK OS=Silicibacter sp. (strain... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_06P21_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621641 ID=DN621641; Name=DN621641; organism=Citrus sinensis; type=EST; length=689bp
TTTTTTTTTTTTTTTTAGGGACTGAAAAATATTCATTATATAAATTGGGT
CCGAATTAAAAGTAAAATTTGAAAAATAAAAAGAAAAGGAAAAATTAATA
TTCATCCTAAGGCTAAAGCAACATAAGATAAAAACCAAACGTCCAGTTTT
CCCACCGTCAAAAAACCGACCTCCCACAAACACAGCAAAATAAACTGGAA
GCTTAGTCAACTTCCTCAATCTTGGGACCGGCGGCACTGCCACCAGCTGG
AGGAGTATCATCATCCATGTCACCGCCCATATCACCACCAGCACCTTGAT
ACATCTTGGCAATGATGGGATTGCAGATGCTCTCAAGCTCCTTCATCTTG
TCTTCAAATTCATCGGCCTCAGCCAGCTGGTTGCTATCAAGCCATTGAAT
TGCCTGGTCAATGGCATCCTCAATCTTCTTCTTGTCAGCTGGATCAAGTT
TGGAGCCGATCTTCTCGTCCTTGACAGTGTTCCTCATATTGTAGGCATAG
TTTTCCAAGGCATTCTTGGCCTCGACCTTCTTCTTGTGCTCCTCATCTTC
AGCCTTGTACTTCTCGGCCTCTTGAACCATCTTCTCAATTTCATCCTTTG
ACAATCTACCCTTGTCGTTGGTGATTGTGATCTTGTTCTTTTGGCCGGTT
GTCTTATCTTCTGCTGAGACATTCAAGATACCGTTAGCA
back to top