DN621598

Overview
NameDN621598
Unique NameDN621598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.647e-13
Identity = 53/167 (31.74%), Postives = 90/167 (53.89%), Query Frame = 2
Query:  104 VIGNFHQLGE-LPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDCCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVA-LLMNXXXXXXXXXXXXXXXEKMFALTGSIVFRMAFGRRFRGSNFDNHSFQEL 598
            V GN+ Q+G+ L  + L  LSKK+G V LL++G+  LVV+SS E A++VL    ++  SR   +    FT    D+ F+ YS++WR++R+I  +  F+ + VQ   F  E+E A ++ +                ++  L  + ++R+ F RRF   + D+  F +L
Sbjct:   42 VFGNWLQVGDDLNQRKLANLSKKFGDVYLLRMGQRNLVVVSSPEMAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYSEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPQAATTGIVLRRRLQLLMYNNMYRIMFDRRF--ESVDDPLFNKL 206          
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.516e-13
Identity = 47/158 (29.75%), Postives = 83/158 (52.53%), Query Frame = 2
Query:  104 VIGNFHQLGE-LPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDCCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFAL-TGSIVFRMAFGRRFRGSN 571
            + GN+ Q+G+ L H++L  L+KK+G + LL++G+  LVV+SS   A++VL    ++  SR   +    FT    D+ F+ Y ++WR++R+I  +  F+ + VQ +    E E A +++                K   L   + +FR+ F RRF   +
Sbjct:   42 IFGNWLQVGDDLNHRNLTDLAKKFGEIFLLRMGQRNLVVVSSPNLAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRTGWEAEAAAVVDDVKKNPKAATEGVVIRKRLQLMMYNNMFRIMFDRRFESED 199          
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.516e-13
Identity = 49/167 (29.34%), Postives = 87/167 (52.10%), Query Frame = 2
Query:  104 VIGNFHQLGE-LPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDCCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFAL-TGSIVFRMAFGRRFRGSNFDNHSFQEL 598
            + GN+ Q+G+ L H++L  L+KK+G + LL++G+  LVV+SS E A++VL    ++  SR   +    FT    D+ F+ Y ++WR++R+I  +  F+ + VQ +    E E A ++                 +   L   + ++R+ F RRF     ++  FQ L
Sbjct:   42 IFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRHGWESEAAAVVEDVKKNPDAAVSGTVIRRRLQLMMYNNMYRIMFDRRFESE--EDPIFQRL 206          
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.898e-13
Identity = 47/154 (30.52%), Postives = 85/154 (55.19%), Query Frame = 2
Query:  104 VIGNFHQLGE-LPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDCCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVA-LLMNXXXXXXXXXXXXXXXEKMFALTGSIVFRMAFGRRF 559
            V GN+ Q+G+ L  ++L   +KK+G + +L++G+  LVV+SS E A+DVL    ++  SR   +    FT    D+ F+ YS++WR++R+I  +  F+ + VQ + F  E+E A ++ +                ++  L  + ++R+ F RRF
Sbjct:   43 VFGNWLQVGDDLNQRNLVDYAKKFGDLFMLRMGQRNLVVVSSPELAKDVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYSEHWRKMRRIMTVPFFTNKVVQQYRFGWEDEAARVVEDVKANPEAATNGIVLRNRLQLLMYNNMYRIMFDRRF 196          
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.006e-12
Identity = 44/162 (27.16%), Postives = 85/162 (52.47%), Query Frame = 2
Query:  104 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDCCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFALTGSIVF----RMAFGRRFRGSNFD 577
            V+GN  Q+  +  +   + +++YGPV+ +  G    VV+S++E A++VLK +D     RP    + +F+ N  D+ ++ Y  ++ ++RK+  LE+F+ +R+++   IRE+EV  ++                  +      + F    R+AFG+RF  +N D
Sbjct:   40 VLGNLRQIKPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFGKRFMNANGD 201          
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.006e-12
Identity = 46/171 (26.90%), Postives = 83/171 (48.54%), Query Frame = 2
Query:  107 IGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLK-VHDLDCCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEK------MFALTGSIVFRMAFGRRFRGSNFDNHSFQEL 598
            +G+ H +    H+ L + S +YGP+  L+ G   +VVI+S   A++     +D+   SRP  + +    YN++ +  +PY D+WR LR+I   E+ S  R+ +F  IR++E+  ++                        +  LT + + RM  G+R+ G + +N    EL
Sbjct:   38 VGHLHLMKPPIHRLLQRYSNQYGPIFSLRFGSRRVVVITSPSLAQESFTGQNDIVLSSRPLQLTAKYVAYNHTTVGTAPYGDHWRNLRRICSQEILSSHRLINFQHIRKDEILRMLTRLSRYTQTSNESNDFTHIELEPLLSDLTFNNIVRMVTGKRYYGDDVNNKEEAEL 208          
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.823e-12
Identity = 42/159 (26.42%), Postives = 83/159 (52.20%), Query Frame = 2
Query:  104 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDCCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFALTGSIVF----RMAFGRRFRGS 568
            V+GN + +  +  +   + ++ YGP++ +  G    V++S++E A++VLK HD     R     + KF+ +  D+ ++ Y  ++ ++RK+  LE+FS +R+++   IRE+EV  +++                 +    G + F    R+AFG+RF  S
Sbjct:   37 VVGNLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTENLGKGILLRKHLGVVAFNNITRLAFGKRFVNS 195          
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: THAD_ARATH (Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=CYP705A5 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.112e-11
Identity = 44/167 (26.35%), Postives = 76/167 (45.51%), Query Frame = 2
Query:  104 VIGNFHQLGELP-HQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDCCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEEVALLMNXXXXXXXXXXXXXXXEKMFALTGSIVFRMAFGRRFRGSNFDNHSFQELV 601
            +IG+ H +  +P HQS   +S KYGP++ L+    P+V++SSA  A ++ K  D++  SRPP           S    +PY DY + ++K  V ++   + +Q    IR +E+                     +   LT + + +M  GR     N +  + + LV
Sbjct:   51 IIGHLHLILFVPIHQSFKNISSKYGPLLHLRFFNFPIVLVSSASTAYEIFKAQDVNVSSRPPPPIEESLILGSSSFINTPYGDYSKFMKKFMVQKLLGPQALQRSRNIRADELERFYKTLLDKAMKKQTVEIRNEAMKLTNNTICKMIMGRSCSEENGEAETVRGLV 217          
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.112e-11
Identity = 33/110 (30.00%), Postives = 62/110 (56.36%), Query Frame = 2
Query:  104 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDCCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREE 433
            + GN  +LG  P++ +  L +KYGPV+ LKLG    +V+ +A+A+ ++ K HD+   +R     +   +Y    +A +PY  +WR  R+I  +E+F  +++     +R +
Sbjct:   44 IFGNMFELGTEPYKKMAVLRQKYGPVLWLKLGSTYTMVVQTAQASEELFKNHDISFANRVIPDVNQAHSYYQGSLAIAPYGPFWRFQRRICTIEMFVHKKISETEPVRRK 153          
BLAST of DN621598 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.453e-11
Identity = 35/111 (31.53%), Postives = 63/111 (56.76%), Query Frame = 2
Query:  104 VIGNFHQLGELPHQSLWQLSKKYGPVMLLKLGRVPLVVISSAEAARDVLKVHDLDCCSRPPLIGSGKFTYNYSDIAFSPYSDYWRELRKISVLEVFSLRRVQSFGFIREEE 436
            ++GN  QLGE PH    +L++ YG +  LK+G   +VV S++ AA ++LK HD    +R          +  + I +S  ++ W+ LRK+   E+F+ + ++S   +RE++
Sbjct:   38 IVGNLLQLGEKPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKK 148          
The following BLAST results are available for this feature:
BLAST of DN621598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
TCMO_RUTGR2.647e-1331.74Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
TCMO_ZINEL4.516e-1329.75Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_SOYBN4.516e-1329.34Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_PETCR5.898e-1330.52Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
C98A1_SORBI1.006e-1227.16Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C81F1_ARATH1.006e-1226.90Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C98A2_SOYBN3.823e-1226.42Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
THAD_ARATH1.112e-1126.35Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=C... [more]
C76A2_SOLME1.112e-1130.00Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C80B2_ESCCA1.453e-1131.53(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O22_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621598 ID=DN621598; Name=DN621598; organism=Citrus sinensis; type=EST; length=644bp
GTGGATGTGGCTCCCTCTTCTCCTCATCCCGCTGCTGCTCATCTTGAAAA
AGCTGAAAGCACAAAACAAGCAGCAGCTTCCACCAAGCCCACCTAAGCTT
CCAGTAATAGGCAATTTTCACCAACTTGGAGAGTTGCCTCACCAATCTTT
GTGGCAACTCTCTAAAAAATACGGCCCCGTTATGCTCCTCAAACTTGGTC
GTGTGCCTCTTGTCGTAATCTCCTCGGCTGAGGCAGCAAGGGATGTATTA
AAAGTTCATGATCTCGATTGTTGCAGCAGACCACCATTAATAGGCAGTGG
GAAGTTTACGTACAACTATTCGGATATAGCTTTTTCACCATATAGCGATT
ACTGGAGGGAGTTGCGGAAAATAAGTGTCCTCGAGGTATTCAGCTTGAGA
AGAGTGCAGTCATTTGGATTCATCAGGGAAGAGGAAGTTGCCCTGCTTAT
GAATTCAATCTCTGAATCATCATCCTCTGCCTCCCCTGTTGATCTTTCTG
AGAAGATGTTTGCTCTCACTGGAAGTATAGTTTTCAGGATGGCTTTTGGG
AGGAGATTTCGAGGGAGCAATTTCGATAATCATAGTTTTCAAGAATTGGT
CCATGCCGTTGAATCTCTGTTGAGGGGATTCGCAGCAGCTGAAT
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