DN621560

Overview
NameDN621560
Unique NameDN621560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_ACIF5 (S-adenosylmethionine synthetase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=metK PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.031e-27
Identity = 63/105 (60.00%), Postives = 77/105 (73.33%), Query Frame = -3 
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            KVDRS +Y  R  AK+IVA+GLARRC VQV+YAIGV +P+S+ VDT+ TG I D  I  +V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+FTWE
Sbjct:  273 KVDRSSSYAGRYVAKNIVAAGLARRCEVQVAYAIGVSQPVSLMVDTFGTGVIDDDRIAALVQEHFDLRPKGIIQMLDLLR---PIYAKTAAYGHFGREEPEFTWE 374
[Close]
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_ACIF2 (S-adenosylmethionine synthetase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=metK PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.031e-27
Identity = 63/105 (60.00%), Postives = 77/105 (73.33%), Query Frame = -3 
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            KVDRS +Y  R  AK+IVA+GLARRC VQV+YAIGV +P+S+ VDT+ TG I D  I  +V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+FTWE
Sbjct:  273 KVDRSSSYAGRYVAKNIVAAGLARRCEVQVAYAIGVSQPVSLMVDTFGTGVIDDDRIAALVQEHFDLRPKGIIQMLDLLR---PIYAKTAAYGHFGREEPEFTWE 374
[Close]
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_SACD2 (S-adenosylmethionine synthetase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=metK PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.571e-27
Identity = 63/105 (60.00%), Postives = 76/105 (72.38%), Query Frame = -3 
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            KVDRS AY  R  AK+IVA+GLA RC +QVSYAIGV EP S+ V+T+ TG I D EI ++V ++FD RP  I   LDL R     + KTAAYGHFGRE+P+FTWE
Sbjct:  271 KVDRSAAYAGRYVAKNIVAAGLASRCEIQVSYAIGVAEPTSISVNTFGTGSIADSEISKLVAQHFDLRPRGIIEMLDLLR---PIYRKTAAYGHFGREEPEFTWE 372
[Close]
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_GEOUR (S-adenosylmethionine synthetase OS=Geobacter uraniireducens (strain Rf4) GN=metK PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.571e-27
Identity = 64/105 (60.95%), Postives = 75/105 (71.43%), Query Frame = -3 
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            KVDRS AY+ R  AK++VA+GL  +C VQV+YAIGV EP+SV VDT  TGKIP   I +IV+E FD RP  I   LDL R     + KTAAYGHFGRE P+FTWE
Sbjct:  274 KVDRSAAYMGRYVAKNLVAAGLCEKCEVQVAYAIGVAEPVSVMVDTSGTGKIPSARIAQIVREVFDLRPRAIIEQLDLLR---PIYKKTAAYGHFGRELPEFTWE 375
[Close]
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_BORPE (S-adenosylmethionine synthetase OS=Bordetella pertussis GN=metK PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.571e-27
Identity = 61/105 (58.10%), Postives = 78/105 (74.29%), Query Frame = -3 
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            KVDRS AY  R  AK++VA+GLAR+C VQVSYAIGV EP+++ V T  TG IPD++I ++V+E+FD RP  I   LDL R     + KTAAYGHFGR +P+F+WE
Sbjct:  274 KVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHFDLRPKGIVNMLDLLR---PIYTKTAAYGHFGRSEPEFSWE 375
[Close]
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_BORPA (S-adenosylmethionine synthetase OS=Bordetella parapertussis GN=metK PE=3 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 6.571e-27
Identity = 61/105 (58.10%), Postives = 78/105 (74.29%), Query Frame = -3 
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            KVDRS AY  R  AK++VA+GLAR+C VQVSYAIGV EP+++ V T  TG IPD++I ++V+E+FD RP  I   LDL R     + KTAAYGHFGR +P+F+WE
Sbjct:  274 KVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHFDLRPKGIVNMLDLLR---PIYTKTAAYGHFGRSEPEFSWE 375
[Close]
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_BORBR (S-adenosylmethionine synthetase OS=Bordetella bronchiseptica GN=metK PE=3 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 6.571e-27
Identity = 61/105 (58.10%), Postives = 78/105 (74.29%), Query Frame = -3 
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            KVDRS AY  R  AK++VA+GLAR+C VQVSYAIGV EP+++ V T  TG IPD++I ++V+E+FD RP  I   LDL R     + KTAAYGHFGR +P+F+WE
Sbjct:  274 KVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHFDLRPKGIVNMLDLLR---PIYTKTAAYGHFGRSEPEFSWE 375
[Close]
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_ACACA (S-adenosylmethionine synthetase OS=Acanthamoeba castellanii GN=metK PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.581e-27
Identity = 66/114 (57.89%), Postives = 77/114 (67.54%), Query Frame = -3 
Query:  378 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRT--GKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKY 713
            KVDRS AY  R  AKS+VA GLA R +VQVSYAIGV  PLSVFVD+Y T  G   D+++L I K NFD RPG I  +L L+R     + KTA +GHFGR DPDF WE  K L +
Sbjct:  278 KVDRSAAYAARWIAKSLVARGLANRALVQVSYAIGVSHPLSVFVDSYGTAQGGRTDEDLLAISKSNFDLRPGKIINDLQLRR---PIYEKTAYHGHFGRNDPDFLWEAPKKLNF 388
[Close]
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_METFK (S-adenosylmethionine synthetase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=metK PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.121e-26
Identity = 61/105 (58.10%), Postives = 78/105 (74.29%), Query Frame = -3 
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            KVDRS AY  R  AK+IVA+GLA RC+VQVSYAIGV +P SV V+TY TGK+ ++ + ++V ++FD RP  I   LDL R     + KTAAYGHFGR++P+FTWE
Sbjct:  272 KVDRSAAYAGRYVAKNIVAAGLASRCLVQVSYAIGVAKPTSVMVETYGTGKVSNEILTQLVLDHFDLRPKGIVKMLDLLR---PIYAKTAAYGHFGRDEPEFTWE 373
[Close]
BLAST of DN621560 vs. ExPASy Swiss-Prot
Match: METK_RALPJ (S-adenosylmethionine synthetase OS=Ralstonia pickettii (strain 12J) GN=metK PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.464e-26
Identity = 61/105 (58.10%), Postives = 78/105 (74.29%), Query Frame = -3 
Query:  399 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWE 713
            KVDRS AY  R  AK++VA+GLAR+C VQVSYAIGV  P+++ V T  TG IPD++I ++V+E+FD RP  I   LDL R     + KTAAYGHFGRE+P+F+WE
Sbjct:  272 KVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVARPINITVYTEGTGVIPDEQIAKLVQEHFDLRPKGIVQMLDLLR---PVYEKTAAYGHFGREEPEFSWE 373
The following BLAST results are available for this feature:
BLAST of DN621560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ACIF55.031e-2760.00S-adenosylmethionine synthetase OS=Acidithiobacill... [more]
METK_ACIF25.031e-2760.00S-adenosylmethionine synthetase OS=Acidithiobacill... [more]
METK_SACD26.571e-2760.00S-adenosylmethionine synthetase OS=Saccharophagus ... [more]
METK_GEOUR6.571e-2760.95S-adenosylmethionine synthetase OS=Geobacter urani... [more]
METK_BORPE6.571e-2758.10S-adenosylmethionine synthetase OS=Bordetella pert... [more]
METK_BORPA6.571e-2758.10S-adenosylmethionine synthetase OS=Bordetella para... [more]
METK_BORBR6.571e-2758.10S-adenosylmethionine synthetase OS=Bordetella bron... [more]
METK_ACACA8.581e-2757.89S-adenosylmethionine synthetase OS=Acanthamoeba ca... [more]
METK_METFK1.121e-2658.10S-adenosylmethionine synthetase OS=Methylobacillus... [more]
METK_RALPJ1.464e-2658.10S-adenosylmethionine synthetase OS=Ralstonia picke... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06O03_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006O03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621560 ID=DN621560; Name=DN621560; organism=Citrus sinensis; type=EST; length=715bp
GGCCCCCCCTTTTTTTTTCAGAGATAAGAAGTAGATGAATACTCATAATT
TGATTATGAAGAAAAAAATGCATTAATAGTACATTAACAAATAACAATGT
GTCTCCACAAACGAGCTCTTCTTCCATCTCTATTTCTCTTCCTAGCATAT
CTCATACAGGCAACTTCTCTGTAATTCTTTCATCGACTATGACTCAATTA
GACCACATATATCTTTCTATTATGGCAAAGATAATACAAATTTATTTATA
AAAAAAAAAGGCCAAGACCAAGAGAGAAAAAAGACAGAATCTGACAGGCA
GACGAAAGAACAAGTAAATTATTGAGTTCAAACAAAGAATGAAACTGCAT
ACTTAAATTCTACTCTTGGGGTTTCTCATACTTGAGGGGCTTCACCACCT
CCCATGTGAAGTCAGGATCCTCCCTTCCAAAATGCCCATATGCAGCAGTC
TTCAAAAACCTGCTATTTCCTCCCCTCTTGAGATCCAAGTTAATGGCAAT
CATTCCAGGCCTGAAATCAAAGTTCTCCTTCACAATCCTCAGGATCTCCT
TGTCCGGAATCTTTCCAGTTCGATAAGTGTCAACAAACACTGAAAGGGGC
TCTGGGACACCAATAGCATAAGAAACCTGCACAATGCAGCGGCGAGCAAG
GCCACTGGCAACGATGCTCTTTGCTGCCTGCCTCACAATGTAAGCACCAC
TTCTATCAACCTTGG
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