DN621544

Overview
NameDN621544
Unique NameDN621544
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: FTSH7_ORYSJ (Cell division protease ftsH homolog 7, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH7 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.450e-14
Identity = 45/109 (41.28%), Postives = 61/109 (55.96%), Query Frame = -2
Query:  360 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR--RQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDF 680
            L +MDGFD    V V+ ATNRAD LDPAL RPGR DR +    PDR  R+  L   V   ++ L  +VDL D  +     + A++A +  EA + A R N+ ++   DF
Sbjct:  474 LTEMDGFDTNSAVIVLGATNRADVLDPALRRPGRFDRVVMVEAPDRFGRESILKVHVSRKELPLGKDVDLSDIAAMTTGFTGADLANLVNEAALLAGRSNKEIVEKIDF 582          
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: CDC48_YEAST (Cell division control protein 48 OS=Saccharomyces cerevisiae GN=CDC48 PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 3.450e-14
Identity = 41/102 (40.20%), Postives = 60/102 (58.82%), Query Frame = -2
Query:  375 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVI 680
            L  MDG     NV VI ATNR +++DPAL R GR DR+++  +PD   +  V ++ T  M L+D+VDLE   +       A+IA++C EA M  +R+   +I
Sbjct:  339 LTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLI 440          

HSP 2 Score: 68.5514 bits (166), Expect = 3.570e-11
Identity = 37/96 (38.54%), Postives = 51/96 (53.12%), Query Frame = -2
Query:  393 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVR 680
            L +MDG +   NV VI ATNR D +DPA+LRPGRLD+ I  PLPD   +  +      K  L   ++L          S A++  I Q A  +A++
Sbjct:  615 LTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIK 710          
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: TERA_DROME (Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila melanogaster GN=TER94 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.885e-14
Identity = 43/114 (37.72%), Postives = 61/114 (53.51%), Query Frame = -2
Query:  339 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTN 680
            L +MDG     NV +I ATNR D +DPA+LRPGRLD+ I  PLPD + +  + +    K  L+ EVDL          S A++  ICQ A   A+R+     + ++ E+    N
Sbjct:  602 LTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEIRREKERAENQN 715          

HSP 2 Score: 73.1738 bits (178), Expect = 1.450e-12
Identity = 37/102 (36.27%), Postives = 61/102 (59.80%), Query Frame = -2
Query:  375 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVI 680
            L  MDG  ++ ++ V+ ATNR +++DPAL R GR DR+I+  +PD   +  V ++ T  M L D+VDLE   +       A++A++C EA +  +R+   +I
Sbjct:  326 LTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLI 427          
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: FTSH_STRR6 (Cell division protease ftsH homolog OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.885e-14
Identity = 40/109 (36.70%), Postives = 63/109 (57.80%), Query Frame = -2
Query:  354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680
            L +MDGF+    + VI ATNR+D LDPALLRPGR DRK+    PD + +  + +V      L+++VDL+    +      A++  +  EA + A R+N+ +I   D ++
Sbjct:  314 LIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDE 422          
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: FTSH_STRPN (Cell division protease ftsH homolog OS=Streptococcus pneumoniae GN=ftsH PE=3 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 5.885e-14
Identity = 40/109 (36.70%), Postives = 63/109 (57.80%), Query Frame = -2
Query:  354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680
            L +MDGF+    + VI ATNR+D LDPALLRPGR DRK+    PD + +  + +V      L+++VDL+    +      A++  +  EA + A R+N+ +I   D ++
Sbjct:  314 LIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDE 422          
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: FTSH2_ORYSJ (Cell division protease ftsH homolog 2, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH2 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.885e-14
Identity = 42/108 (38.89%), Postives = 60/108 (55.56%), Query Frame = -2
Query:  357 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 680
            L +MDGF+    + VI ATNRAD LD ALLRPGR DR++   +PD R +  + +V  +      +V LE    R    S A++A +  EA + A R+ R  I  K+ +
Sbjct:  341 LTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDTDVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGRTAISSKEID 448          
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: FTSH2_HAEIN (Cell division protease ftsH homolog 2 OS=Haemophilus influenzae GN=ftsH-B PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.885e-14
Identity = 42/109 (38.53%), Postives = 61/109 (55.96%), Query Frame = -2
Query:  354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680
            L +MDGF     V VI ATNR D LDPAL RPGR DR++   LPD + +  + +V   K++++ +VD           S A++A +  EA + A R N+  +   +FEK
Sbjct:   24 LVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEK 132          
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: FTSH1_HAEIN (Cell division protease ftsH homolog 1 OS=Haemophilus influenzae GN=ftsH-A PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.885e-14
Identity = 42/109 (38.53%), Postives = 61/109 (55.96%), Query Frame = -2
Query:  354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680
            L +MDGF     V VI ATNR D LDPAL RPGR DR++   LPD + +  + +V   K++++ +VD           S A++A +  EA + A R N+  +   +FEK
Sbjct:  278 LVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEK 386          
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: FTSH_MYCLE (Cell division protease ftsH homolog OS=Mycobacterium leprae GN=ftsH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.686e-14
Identity = 42/102 (41.18%), Postives = 59/102 (57.84%), Query Frame = -2
Query:  375 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVI 680
            L +MDGF     V +I ATNR D LDPALLRPGR DR+I    PD   +R V +V +    ++D+ DL+    R   ++ A++A +  EA +   R+N  VI
Sbjct:  290 LVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAVLRVHSKGKPIADDADLDGLAKRTVGMTGADLANVVNEAALLTARENGLVI 391          
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: CDAT_PLAF7 (Putative cell division cycle ATPase OS=Plasmodium falciparum (isolate 3D7) GN=PF07_0047 PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 7.686e-14
Identity = 42/126 (33.33%), Postives = 69/126 (54.76%), Query Frame = -2
Query:  318 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE-----KGYRTNVKKPDTD 680
            L ++DG ++   + +I ATNR D LD AL RPGRLD+ I   LPD + +  +F+       L+++VD+ D   R +  S A+I  +CQ A   A+++  +++  +  E     K  + + K  DTD
Sbjct: 1060 LTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSFKIDDTD 1185          

HSP 2 Score: 70.8626 bits (172), Expect = 7.194e-12
Identity = 36/98 (36.73%), Postives = 56/98 (57.14%), Query Frame = -2
Query:  387 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKN 680
            L  MDG  +  NV V+ ATNR +++DPAL R GR DR+IE P+PD + +  +    T KM L  +V+L            A++A +C EA +  ++++
Sbjct:  652 LTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEH 749          
The following BLAST results are available for this feature:
BLAST of DN621544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
FTSH7_ORYSJ3.450e-1441.28Cell division protease ftsH homolog 7, chloroplast... [more]
CDC48_YEAST3.450e-1440.20Cell division control protein 48 OS=Saccharomyces ... [more]
TERA_DROME5.885e-1437.72Transitional endoplasmic reticulum ATPase TER94 OS... [more]
FTSH_STRR65.885e-1436.70Cell division protease ftsH homolog OS=Streptococc... [more]
FTSH_STRPN5.885e-1436.70Cell division protease ftsH homolog OS=Streptococc... [more]
FTSH2_ORYSJ5.885e-1438.89Cell division protease ftsH homolog 2, chloroplast... [more]
FTSH2_HAEIN5.885e-1438.53Cell division protease ftsH homolog 2 OS=Haemophil... [more]
FTSH1_HAEIN5.885e-1438.53Cell division protease ftsH homolog 1 OS=Haemophil... [more]
FTSH_MYCLE7.686e-1441.18Cell division protease ftsH homolog OS=Mycobacteri... [more]
CDAT_PLAF77.686e-1433.33Putative cell division cycle ATPase OS=Plasmodium ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06N18_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006N18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621544 ID=DN621544; Name=DN621544; organism=Citrus sinensis; type=EST; length=681bp
CCAAAAATAATAATAAAATTTAAAAAATACAAACGTACTTGTGCACACTA
GGCCTCGTAAAAATATTAATTCAAAGTCATAATATGGCGCAAAATCAGAC
ATAAATCAAACCATTAATTCAGATTTTTCTGATTTTTAACGCTACTCTAA
CTTAAGCTGGAATATAATGCTCAATGAAGTCTAATAAAGCCATATCACAA
GTTGTGGCGATGCATGACCAATGGCAACGATGTTCATAGTGAGCGAGACA
ATCTGACAAACATTATCAAAGTGATCTTCATAAACTCTTCTAGCCCTCTT
CACTTGTAAAATTCGAAGTCGGTGTCGGGCTTCTTCACATTGGTCCGATA
ACCCTTTTCAAAGTCCTTGGGGAGTATGACATACCTGTTCTTGCGCACAG
CATGCATTCCTGCCTCTTGGCAGATGGCTGCAATCTCAGCAGCACTGATT
TTATCCGGACGGGAAACATAATCCTCCAAGTCTACCTCATCGCTTAAGTT
CATCTTTGCCGTGCAAACCTGAAAAACGAGCCTCTTTTGTCGTCTATCAG
GCAAAGGAAATTCAATTTTTCGGTCAAGCCTTCCAGGACGGAGAAGTGCA
GGGTCCAATGTGTCAGCCCGATTTGTTGCCATGATGACCTTAACATTTAC
AGTCTGATCAAATCCGTCCATCTGATTGAGG
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