DN621544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: SPG7_HUMAN (Paraplegin OS=Homo sapiens GN=SPG7 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.472e-12 Identity = 42/110 (38.18%), Postives = 62/110 (56.36%), Query Frame = -2 Query: 357 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQ--VCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 680 L +MDG T +V V+ +TNRAD LD AL+RPGRLDR + LP +++R +F+ + + K+ S + S A+IA IC EA +HA R+ + +FE Sbjct: 437 LVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTLNFE 546
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PEX1_MOUSE (Peroxisome biogenesis factor 1 OS=Mus musculus GN=Pex1 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.229e-12 Identity = 36/96 (37.50%), Postives = 58/96 (60.42%), Query Frame = -2 Query: 393 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVR 680 L Q+DG + V V+ AT+R D +DPALLRPGRLD+ + P PD+ + + V + + L+D+VDL+ S D + A++ A+ A + A++ Sbjct: 966 LTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILTVLSKSLALADDVDLQHVASVTDSFTGADLKALLYNAQLEALQ 1061
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: PEX1_HUMAN (Peroxisome biogenesis factor 1 OS=Homo sapiens GN=PEX1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.217e-12 Identity = 36/95 (37.89%), Postives = 57/95 (60.00%), Query Frame = -2 Query: 396 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAV 680 L Q+DG + V V+ AT+R D +DPALLRPGRLD+ + P PD+ + + V + + L+D+VDL+ S D + A++ A+ A + A+ Sbjct: 965 LTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQLEAL 1059
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: FTSH2_SYNY3 (Cell division protease ftsH homolog 2 OS=Synechocystis sp. (strain PCC 6803) GN=slr1390 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.217e-12 Identity = 37/102 (36.27%), Postives = 54/102 (52.94%), Query Frame = -2 Query: 375 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVI 680 L +MDGF+ + VI ATNR D LD ALLRPGR DR++ PD + + L+ + L +EV L R + A++A + EA + R+ + I Sbjct: 338 LTEMDGFEGNSGIIVIAATNRPDVLDLALLRPGRFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLAAIARRTPGFTGADLANVLNEAAIFTARRRKEAI 439
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: FTSH1_SYNY3 (Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.217e-12 Identity = 35/102 (34.31%), Postives = 55/102 (53.92%), Query Frame = -2 Query: 375 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVI 680 L +MDGF+ + +I ATNR D LD AL+RPGR DR++ PD ++ + +V L+ EV ++ R S A++A + EA + R+ + I Sbjct: 299 LTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAI 400
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: SEC18_SCHPO (Vesicular-fusion protein sec18 OS=Schizosaccharomyces pombe GN=sec18 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.508e-12 Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = -2 Query: 399 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMN----LSDEVDLEDYVSRPDKISAAEIAAICQEAGMHA 680 L +MDG DQ N+ VI TNR D +D ALLRPGRL+ +E LPD + + ++ T++M L ++VD+E+ S S AEIA + + A A Sbjct: 406 LAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVDMEELASLTKNFSGAEIAGLIKSASSFA 503
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: FTSH8_ORYSJ (Cell division protease ftsH homolog 8, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH8 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.508e-12 Identity = 41/110 (37.27%), Postives = 58/110 (52.73%), Query Frame = -2 Query: 357 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDL--EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 680 L +MDGF T V V+ TNR D LD ALLRPGR DR+I PD + + +F++ K+ L +E + + + A+IA +C EA + A R I + FE Sbjct: 463 LVEMDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLKKLKLDNEPSFYSQRLAALTPGFAGADIANVCNEAALIAARSEETQITMQHFE 572
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: FTSH3_ORYSJ (Cell division protease ftsH homolog 3, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH3 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.508e-12 Identity = 41/110 (37.27%), Postives = 58/110 (52.73%), Query Frame = -2 Query: 357 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDL--EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 680 L +MDGF T V V+ TNR D LD ALLRPGR DR+I PD + + +F++ K+ L E + + + A+IA +C EA + A R +I + FE Sbjct: 448 LVEMDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQISIDKPDIKGRDQIFRIYLKKLKLDKEPSFYSQRLAALTPGFAGADIANVCNEAALIAARSEGTLITMQHFE 557
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: YB7A_SCHPO (Uncharacterized AAA domain-containing protein C16E9.10c OS=Schizosaccharomyces pombe GN=SPBC16E9.10c PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.194e-12 Identity = 39/99 (39.39%), Postives = 61/99 (61.62%), Query Frame = -2 Query: 393 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDK---ISAAEIAAICQEAGMHAVR 680 L ++DG V VI ATNR D +DPA+LRPGRLD+ + LPD ++ + + T + L +EV+L D + R ++ S A++AA+ +EA + A+R Sbjct: 617 LTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEVNL-DVLGRDERCSNFSGADLAALVREAAVTALR 714
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: SPG7_MOUSE (Paraplegin OS=Mus musculus GN=Spg7 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.395e-12 Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = -2 Query: 357 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDL--EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 680 L +MDG T +V V+ +TNRAD LD AL+RPGRLDR + LP +++R +F+ + L+ + S A+IA IC EA +HA R+ + +FE Sbjct: 437 LVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGADIANICNEAALHAAREGHTSVHTFNFE 546 The following BLAST results are available for this feature:
BLAST of DN621544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621544 ID=DN621544; Name=DN621544; organism=Citrus sinensis; type=EST; length=681bpback to top |