DN621544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: NSF_CAEEL (Vesicle-fusing ATPase OS=Caenorhabditis elegans GN=nsf-1 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 9.395e-12 Identity = 39/101 (38.61%), Postives = 58/101 (57.43%), Query Frame = -2 Query: 390 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKM----NLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 680 L++MDG +Q N+ VI TNR D +D ALLRPGRL+ ++E LPD + + ++ TA+M + VDLED R S AE+ + + A A+ + Sbjct: 432 LSKMDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKIHTARMREYNKMDPNVDLEDISKRTKNFSGAELEGLVRAAQSSAMNR 532
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: FTSH6_ARATH (Cell division protease ftsH homolog 6, chloroplastic OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 39/99 (39.39%), Postives = 54/99 (54.55%), Query Frame = -2 Query: 384 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNR 680 L +MDGF V VI ATNR + LD ALLRPGR DR++ LPD R + + +V + L +V L R S A++A + EA + A R+ + Sbjct: 351 LTEMDGFAGNTGVIVIAATNRPEILDSALLRPGRFDRQVSVGLPDIRGREEILKVHSRSKKLDKDVSLSVIAMRTPGFSGADLANLMNEAAILAGRRGK 449
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: ATD2B_HUMAN (ATPase family AAA domain-containing protein 2B OS=Homo sapiens GN=ATAD2B PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.603e-11 Identity = 40/96 (41.67%), Postives = 57/96 (59.38%), Query Frame = -2 Query: 390 MDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMN--LSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRK 671 MDG D + VI ATNR D++DPAL RPGR DR+ F LPD++ ++ + Q+ T N LSD L + + A+I A+C EA + A+R+ Sbjct: 533 MDGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLPDQKARKHILQIHTRDWNPKLSDAF-LGELAEKCVGYCGADIKALCTEAALIALRR 627
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: RCA1_SCHPO (Mitochondrial respiratory chain complexes assembly protein rca1 OS=Schizosaccharomyces pombe GN=SPBC543.09 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 39/111 (35.14%), Postives = 57/111 (51.35%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDL--EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 L +MDGF + ++ V TNR D LDPALLRPGR DR+I PD + +F+V + +D +DL + + A+I +C E + A R N + FE+ Sbjct: 424 LVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNIDLIAKRLAVLTSGFTGADIMNVCNEGALIAARSNSNEVQMVHFEQ 534
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: FTSHA_ARATH (Cell division protease ftsH homolog 10, mitochondrial OS=Arabidopsis thaliana GN=FTSH10 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 40/110 (36.36%), Postives = 56/110 (50.91%), Query Frame = -2 Query: 357 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDL--EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 680 L +MDGF T V V+ TNR D LD ALLRPGR DR+I PD + + +FQ+ K+ L E + + + A+IA +C EA + A R + F+ Sbjct: 455 LVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFD 564
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: NSF_PONAB (Vesicle-fusing ATPase OS=Pongo abelii GN=NSF PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 44/127 (34.65%), Postives = 69/127 (54.33%), Query Frame = -2 Query: 324 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMN----LSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYV----ILPKDFEKGYRTNVKKPD 680 L+++DG +Q N+ VI TNR D +D ALLRPGRL+ K+E LPD + + + + TA+M LS +VD+++ S AE+ + + A A+ NR++ + D EK V + D Sbjct: 355 LSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAMETKNFSGAELEGLVRAAQSTAM--NRHIKASTKVEVDMEKAESLQVTRGD 479
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: FTSH_RICBR (Cell division protease ftsH homolog OS=Rickettsia bellii (strain RML369-C) GN=ftsH PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 41/109 (37.61%), Postives = 57/109 (52.29%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 L +MDGF+ V +I ATNR D LD ALLRPGR DR+I PD + + QV K+ S ++ S AE+A + EA + A R+N+ + D E+ Sbjct: 282 LVEMDGFEANEGVVIIAATNRPDVLDNALLRPGRFDRQITVSNPDIDGREKILQVHLKKVKYSTKIVPRIIARGTPGFSGAELANLVNEATLIAARRNKKEVEMHDLEE 390
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: FTSH3_ARATH (Cell division protease ftsH homolog 3, mitochondrial OS=Arabidopsis thaliana GN=FTSH3 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 40/110 (36.36%), Postives = 56/110 (50.91%), Query Frame = -2 Query: 357 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDL--EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 680 L +MDGF T V V+ TNR D LD ALLRPGR DR+I PD + + +F++ K+ L E + + + A+IA +C EA + A R + FE Sbjct: 449 LVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFKIYLKKIKLDHEPSYYSQRLAALTPGFAGADIANVCNEAALIAARHEGATVTMAHFE 558
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: TBP7_CAEEL (TAT-binding homolog 7 OS=Caenorhabditis elegans GN=lex-1 PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 40/99 (40.40%), Postives = 55/99 (55.56%), Query Frame = -2 Query: 381 MDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEV--DLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRY 671 MDG D V VI ATNR DTLDPAL RPGR DR++ F LPD +R + + T+K + + L+ R A++ +C EA + +R +RY Sbjct: 524 MDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADLKFLCTEAVLIGLR-SRY 621
BLAST of DN621544 vs. ExPASy Swiss-Prot
Match: RCA1_YEAST (Mitochondrial respiratory chain complexes assembly protein RCA1 OS=Saccharomyces cerevisiae GN=RCA1 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 41/111 (36.94%), Postives = 61/111 (54.95%), Query Frame = -2 Query: 354 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEV-DLEDYVSR-PDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEK 680 L +MDGF +V V+ TNR D LD ALLRPGR DR I P+ ++ +F V + L+ E+ DL++ ++ S A+IA +C EA + A R + + FE+ Sbjct: 476 LVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNEAALIAARSDEDAVKLNHFEQ 586 The following BLAST results are available for this feature:
BLAST of DN621544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621544 ID=DN621544; Name=DN621544; organism=Citrus sinensis; type=EST; length=681bpback to top |