DN621538
Overview
Analyses
This EST is derived from or has results from the following analyses
Libraries
Homology
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_SHISS (3-isopropylmalate dehydrogenase OS=Shigella sonnei (strain Ss046) GN=leuB PE=3 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.414e-36 Identity = 84/185 (45.41%), Postives = 118/185 (63.78%), Query Frame = 1 Query: 124 KRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETG-LLQIREGLKVFANLRPATVLPQLVDSSTLKKEV-AEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 K Y I +LPGDGIGPEV+ A VL + + +GG+A+D G PLP T+ +Q+DAVL G++GG KW+ +PE G LL +R+ K+F+NLRPA + L L+ ++ A G D++ VRELTGGIYFG+P+G + E+ F+TEVY +E++RIAR+AFE+ARKR Sbjct: 3 KNYHIAVLPGDGIGPEVMTQALKVLNAVRNRFAMRITTSHYDVGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKRFKLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEK-AFDTEVYHRFEIERIARIAFESARKR 186
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_SHIBS (3-isopropylmalate dehydrogenase OS=Shigella boydii serotype 4 (strain Sb227) GN=leuB PE=3 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.847e-36 Identity = 84/185 (45.41%), Postives = 118/185 (63.78%), Query Frame = 1 Query: 124 KRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETG-LLQIREGLKVFANLRPATVLPQLVDSSTLKKEV-AEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 K Y I +LPGDGIGPEV+ A VL + + +GG+A+D G PLP T+ +Q+DAVL G++GG KW+ +PE G LL +R+ K+F+NLRPA + L L+ ++ A G D++ VRELTGGIYFG+P+G + E+ F+TEVY +E++RIAR+AFE+ARKR Sbjct: 3 KNYHIAVLPGDGIGPEVMTQALKVLDAVRNRFAMRITTSHYDVGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKHFKLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEK-AFDTEVYHRFEIERIARIAFESARKR 186
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_GEOMG (3-isopropylmalate dehydrogenase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=leuB PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.847e-36 Identity = 82/183 (44.81%), Postives = 118/183 (64.48%), Query Frame = 1 Query: 130 YSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETG-LLQIREGLKVFANLRPATVLPQLVDSSTLKKEV-AEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 + + +LPGDGIGPEV+A A VL ++F +GG+ +DL G LPE T+ K SDA+L G++GG KW+ +PE G LL +R+ ++ANLRPA + P L +S+LK+EV A G +++V+RELTGGIYF +P+G E + +GF+T Y+ E++RI VAF+ ARKR Sbjct: 5 FKVAVLPGDGIGPEVMAEALRVLDAIEKKYDVKFERTHANVGGAGIDLEGKALPETTITICKTSDAILFGSVGGPKWETLPPDEQPERGALLPLRKIFGLYANLRPAIIFPSLTGASSLKEEVIAGGFNVLVIRELTGGIYFAQPKGI-EGEGRDRVGFDTMRYSVPEIERITHVAFQAARKR 186
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_ECOUT (3-isopropylmalate dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=leuB PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.847e-36 Identity = 84/185 (45.41%), Postives = 118/185 (63.78%), Query Frame = 1 Query: 124 KRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETG-LLQIREGLKVFANLRPATVLPQLVDSSTLKKEV-AEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 K Y I +LPGDGIGPEV+ A VL + + +GG+A+D G PLP T+ +Q+DAVL G++GG KW+ +PE G LL +R+ K+F+NLRPA + L L+ ++ A G D++ VRELTGGIYFG+P+G + E+ F+TEVY +E++RIAR+AFE+ARKR Sbjct: 4 KNYHIAVLPGDGIGPEVMTQALKVLDAVRNRFAMRITTSHYDVGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKHFKLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEK-AFDTEVYHRFEIERIARIAFESARKR 187
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_ECOLI (3-isopropylmalate dehydrogenase OS=Escherichia coli (strain K12) GN=leuB PE=1 SV=3) HSP 1 Score: 152.525 bits (384), Expect = 1.847e-36 Identity = 84/185 (45.41%), Postives = 118/185 (63.78%), Query Frame = 1 Query: 124 KRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETG-LLQIREGLKVFANLRPATVLPQLVDSSTLKKEV-AEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 K Y I +LPGDGIGPEV+ A VL + + +GG+A+D G PLP T+ +Q+DAVL G++GG KW+ +PE G LL +R+ K+F+NLRPA + L L+ ++ A G D++ VRELTGGIYFG+P+G + E+ F+TEVY +E++RIAR+AFE+ARKR Sbjct: 3 KNYHIAVLPGDGIGPEVMTQALKVLDAVRNRFAMRITTSHYDVGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKHFKLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEK-AFDTEVYHRFEIERIARIAFESARKR 186
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_ECOL6 (3-isopropylmalate dehydrogenase OS=Escherichia coli O6 GN=leuB PE=3 SV=3) HSP 1 Score: 152.525 bits (384), Expect = 1.847e-36 Identity = 84/185 (45.41%), Postives = 118/185 (63.78%), Query Frame = 1 Query: 124 KRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETG-LLQIREGLKVFANLRPATVLPQLVDSSTLKKEV-AEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 K Y I +LPGDGIGPEV+ A VL + + +GG+A+D G PLP T+ +Q+DAVL G++GG KW+ +PE G LL +R+ K+F+NLRPA + L L+ ++ A G D++ VRELTGGIYFG+P+G + E+ F+TEVY +E++RIAR+AFE+ARKR Sbjct: 3 KNYHIAVLPGDGIGPEVMTQALKVLDAVRNRFAMRITTSHYDVGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKHFKLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEK-AFDTEVYHRFEIERIARIAFESARKR 186
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_ECO57 (3-isopropylmalate dehydrogenase OS=Escherichia coli O157:H7 GN=leuB PE=3 SV=3) HSP 1 Score: 152.525 bits (384), Expect = 1.847e-36 Identity = 84/185 (45.41%), Postives = 118/185 (63.78%), Query Frame = 1 Query: 124 KRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETG-LLQIREGLKVFANLRPATVLPQLVDSSTLKKEV-AEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 K Y I +LPGDGIGPEV+ A VL + + +GG+A+D G PLP T+ +Q+DAVL G++GG KW+ +PE G LL +R+ K+F+NLRPA + L L+ ++ A G D++ VRELTGGIYFG+P+G + E+ F+TEVY +E++RIAR+AFE+ARKR Sbjct: 3 KNYHIAVLPGDGIGPEVMTQALKVLDAVRNRFAMRITTSHYDVGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKHFKLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEK-AFDTEVYHRFEIERIARIAFESARKR 186
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_BUCUM (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Uroleucon ambrosiae GN=leuB PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.847e-36 Identity = 78/185 (42.16%), Postives = 119/185 (64.32%), Query Frame = 1 Query: 127 RYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPE-TGLLQIREGLKVFANLRPATVLPQLVDSSTLKKE--VAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 +Y I++LPGDGIGPEV+ A +L + + + +E +GG+A+D GV LP++TL + SDA+L G++GG KWD +PE LL +R+ +FANLRPA + +L S L+ + + G +++ +RELTGGIYFGKP G + ++ E F+TE+Y YE++RIA +AF+ A+ R Sbjct: 4 KYRISVLPGDGIGPEVMREAYKILNILKNHFSLPLEIKEFNIGGAAIDQEGVALPKKTLLGCENSDAILFGSVGGKKWDHLPIDKRPERASLLPLRKHFNLFANLRPAQLYSELKYLSPLRSDIXIKNGFNILCIRELTGGIYFGKPTGRXLKKNNIEYAFDTEIYYDYEINRIAHLAFQLAQTR 188
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_BUCAP (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=leuB PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.847e-36 Identity = 80/185 (43.24%), Postives = 119/185 (64.32%), Query Frame = 1 Query: 124 KRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPE-TGLLQIREGLKVFANLRPATVLPQLVDSSTLKKE-VAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 K++ I +LPGDGIGPEV+ A +L + ++ +E +GG A+D G+ LPE+TL + SDA+L G++GG KWD +PE LL +R+ +F+NLRPA + L + S L+ + V +G D++ +RELTGGIYFGKP+G ++G E F+TE+Y +E++RIA +AFE A R Sbjct: 3 KKFRIAVLPGDGIGPEVMREAYKILNILERKFFLKLELREFDIGGIAIDREGIALPEKTLRGCENSDAILFGSVGGKKWDYLPIESRPERASLLPLRKHFNLFSNLRPAKLRVDLKNLSPLRSDIVRDGFDILCIRELTGGIYFGKPKGRFKNKNG-EYAFDTEIYYDFEIERIANLAFELASSR 186
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_SHIFL (3-isopropylmalate dehydrogenase OS=Shigella flexneri GN=leuB PE=3 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 2.412e-36 Identity = 84/185 (45.41%), Postives = 117/185 (63.24%), Query Frame = 1 Query: 124 KRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETG-LLQIREGLKVFANLRPATVLPQLVDSSTLKKEV-AEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 K Y I +LPGDGIGPEV+ A VL + + +GG+A+D G PLP T+ +Q+DAVL G++GG KW+ +PE G LL +R+ K+F+NLRPA + L L+ ++ A G D+ VRELTGGIYFG+P+G + E+ F+TEVY +E++RIAR+AFE+ARKR Sbjct: 3 KNYHIAVLPGDGIGPEVMTQALKVLNAVRNRFAMRITTSHYDVGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKHFKLFSNLRPAKLYQGLEAFCPLRADIAANGFDIQCVRELTGGIYFGQPKGREGSGQYEK-AFDTEVYHRFEIERIARIAFESARKR 186 The following BLAST results are available for this feature:
BLAST of DN621538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 292
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621538 ID=DN621538; Name=DN621538; organism=Citrus sinensis; type=EST; length=674bpback to top |