DN621538

Overview
NameDN621538
Unique NameDN621538
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_STAA3 (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain USA300) GN=leuB PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.667e-35
Identity = 77/181 (42.54%), Postives = 114/181 (62.98%), Query Frame = 1
Query:  130 YSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            Y+I  LPGDGIGPE++  + ++L++  +     +  +    GG+++D  G PL E+TL A K++DA+LLGAIGG KW   + + +PE GLL++R+ L +F N+RP TV+      S LK+E  EG DL++VRELT GIYFG+PR +   E       ++  Y   E++RI  VAF+ A  R
Sbjct:    3 YNIVALPGDGIGPEILNGSLSLLEIISNKYNFNYQIEHHEFGGASIDTFGEPLTEKTLNACKRADAILLGAIGGPKW--TDPNNRPEQGLLKLRKSLNLFVNIRPTTVVKGASSLSPLKEERVEGTDLVIVRELTSGIYFGEPRHFNNHE-----ALDSLTYTREEIERIVHVAFKLAASR 176          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_BUCBP (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=leuB PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.667e-35
Identity = 80/185 (43.24%), Postives = 115/185 (62.16%), Query Frame = 1
Query:  124 KRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETG-LLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAE-GVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            + Y I +LPGDGIGPE++     +L++  S   +    QE  +GG A+D  GV LP++TL   + S A+L G+IGG KW+    HL+PE G LL +R+   +F+NLR A +   L   S LK  ++  G D++ VRELTGGIYFG P+G  V++      F+TEVY  +E++RIA +AF+ A  R
Sbjct:    3 RNYKIAVLPGDGIGPEIMREGYKILRILKSKLSLNIMTQEFDVGGVAIDKYGVALPKKTLQGCRDSHAILFGSIGGPKWEDLPSHLQPERGALLPLRKYFNLFSNLRLARIYSGLEKLSPLKSRISNLGCDILCVRELTGGIYFGDPKGSKVSK-SLNCAFDTEVYYQFEIERIAHMAFDLALTR 186          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_NOVAD (3-isopropylmalate dehydrogenase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=leuB PE=3 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 3.483e-35
Identity = 83/179 (46.37%), Postives = 112/179 (62.57%), Query Frame = 1
Query:  136 ITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            I +LPGDGIGPEV   A  V++  G L  IE   +E P+GG+A    G PLP ETL  A+ SD +L GA+G    D  E+HL+PE  +L +R+ L +FANLRPA V   + D S L+ EVA  +DL++VREL G +YFG+ +G+    +G+  G++   Y+  EV RIA VAF  A  R
Sbjct:    3 IAVLPGDGIGPEVTREAVRVIEALG-LGDIEM--KEAPVGGAAYKAYGHPLPPETLEIARLSDGILFGAVGDPDCDSLERHLRPEQAILGLRKALTLFANLRPARVFKGMEDFSALRPEVAGAIDLLIVRELNGDVYFGE-KGFRTAANGDREGYDVMSYSESEVRRIAHVAFRAAMGR 177          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_BUCDN (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Diuraphis noxia GN=leuB PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.483e-35
Identity = 82/185 (44.32%), Postives = 118/185 (63.78%), Query Frame = 1
Query:  124 KRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPE-TGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAE-GVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            K+Y I +LPGDGIGPEV+  A  +L++      +    +E  +GG A+D  G+ LP++TL   + SDA+LLG+IGG KWD    + +PE   LL +R+    F NLRP+ +  +L   S L+ ++ + G D++ VRELTGGIYFGKPRG  VT+      F+TE+Y  +E+ RIA +AF+ AR R
Sbjct:    3 KQYHIAVLPGDGIGPEVMQEAYKILQVLREHFSLFIKTKEFDIGGIAIDNHGIALPKKTLIGCENSDAILLGSIGGKKWDTLPINERPERASLLPLRKHFNFFCNLRPSNLYKELNFLSPLRNDIVKHGFDILCVRELTGGIYFGKPRG-RVTKKKLMYAFDTEIYYKFEIVRIAHLAFKLARSR 186          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_BLOFL (3-isopropylmalate dehydrogenase OS=Blochmannia floridanus GN=leuB PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.483e-35
Identity = 79/184 (42.93%), Postives = 121/184 (65.76%), Query Frame = 1
Query:  130 YSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETG-LLQIREGLKVFANLRPATVLPQLVDSSTLKKE-VAEGVDLMVVRELTGGIYFGKPRG-YGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            Y I +LPGDGIGPE++  A  +L    +   I     E  +GG+ALDL G PLP++T+   ++S+A+L GA+GG KW+   +  +PE G LL +R+   +F NLRP  +  +L++ S LK E +++G+D++ +REL GGIYFGKP+G  G+    +E  F+T +Y  +E++RIA  AF+ A+KR
Sbjct:    6 YHIAILPGDGIGPEIMQQAYKILNTVKNKFKINIITTEYKVGGNALDLEGSPLPKDTIKNCEKSNAILFGAVGGPKWNNINETSRPEFGALLTLRKHFNLFINLRPIYLPIELINLSPLKPEIISQGLDMICIRELIGGIYFGKPQGKSGI--RSQEHAFDTAIYHRFEIERIAHFAFKLAQKR 187          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_DEHSC (3-isopropylmalate dehydrogenase OS=Dehalococcoides sp. (strain CBDB1) GN=leuB PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.549e-35
Identity = 77/181 (42.54%), Postives = 109/181 (60.22%), Query Frame = 1
Query:  130 YSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            + +T+LPGDGIGPEV+     VL          F +Q   +GG  +D  GV L    LA  K+SDAVLL A+G  ++D  +  + PE GLL +R+GL +FAN+RP  V P LV+S+ +K E+ +G D + +RELTGG+YF KP+    T  G     ++  Y+  E++RI RV FE A+ R
Sbjct:    3 FKLTVLPGDGIGPEVMDEGLKVLNAVAKKYKHTFKYQYGLIGGCCIDKEGVALSPAALAMCKKSDAVLLAAVGDPRFDDPKLPVHPEDGLLALRKGLGLFANIRPVKVAPSLVNSTPIKAEIVKGTDFIFIRELTGGVYFAKPKKRWTTPAGIRKATDSMTYSENEIERIVRVGFELAKNR 183          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_YAMOH (3-isopropylmalate dehydrogenase OS=Yamadazyma ohmeri GN=LEU2 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.759e-35
Identity = 81/174 (46.55%), Postives = 114/174 (65.52%), Query Frame = 1
Query:  133 SITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPAT-VLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVA 651
            +IT++PGD +G E+   A  VLK    +  ++F F+   +GG+A+D  GVPLP+ETL AAK SDAVLLGA+GG KW      ++PE GLL+IR+ L ++ANLRP   V   L++ S LK E+ +G +  VVREL GGIYFG+ +    +  G+   ++TE Y+  EV RI R+A
Sbjct:    5 TITVVPGDHVGTEICDEAIKVLKAIEKVSPVKFEFKHHLIGGAAIDATGVPLPDETLEAAKSSDAVLLGAVGGPKWGTGA--VRPEQGLLKIRKELNLYANLRPCNFVSDSLLELSPLKSEIVKGTNFTVVRELVGGIYFGERQEQEESSDGQS-AWDTEKYSVEEVTRITRMA 175          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_CANBO (3-isopropylmalate dehydrogenase OS=Candida boidinii GN=LEU2 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.013e-34
Identity = 83/174 (47.70%), Postives = 113/174 (64.94%), Query Frame = 1
Query:  136 ITLLPGDGIGPEVIAVAKNVLKLAGSLEG-IEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPAT-VLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVA 651
            I LLPGD +G EV+  A  +LK    ++  I+F F+   +GG+A+D  GVPLP+E L AAK+SDAVLLGA+GG KW   E  ++PE GLL+IR+ L ++ANLRP      +L+D S LK ++ +G D  VVREL GGIYFG      V + G     ++E Y+  EV+RI R+A
Sbjct:    8 IVLLPGDHVGVEVVEEAVKILKSISEVKPEIQFKFENHLIGGAAIDATGVPLPDEALEAAKKSDAVLLGAVGGPKWGTGE--VRPEQGLLKIRKELNLYANLRPCNFASDKLLDLSPLKSDIVKGTDFTVVRELVGGIYFGD----RVEDDGSGFASDSESYSVPEVERITRMA 175          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_PSEHT (3-isopropylmalate dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=leuB PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.323e-34
Identity = 80/183 (43.72%), Postives = 117/183 (63.93%), Query Frame = 1
Query:  130 YSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETG-LLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAE-GVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            YS+ +L GDGIGPE++A A+ VL    +  G     +   +GG+A+D  G  LP+ T+ A + +DA+L GA+GG KW+      +PE G LL +R+   +F NLRPA +LP L  +S L+ +++E G D++ VRELTGGIYFG+    G  E+  E  F+T+ Y+  E++RIAR AFE A+ R
Sbjct:    6 YSVAVLAGDGIGPEIMAAAEQVLDAVSNKFGFTLNREHHAIGGAAIDKHGKALPQSTVTACENADAILFGAVGGPKWEHLPPDEQPERGSLLPLRKHFGLFCNLRPAQLLPALSTASPLRADISEQGFDILCVRELTGGIYFGEKGRSGEGEN--ESAFDTQRYSRKEIERIARFAFEAAKLR 186          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_LISMO (3-isopropylmalate dehydrogenase OS=Listeria monocytogenes GN=leuB PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.323e-34
Identity = 78/181 (43.09%), Postives = 105/181 (58.01%), Query Frame = 1
Query:  130 YSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            Y IT L GDGIGPE++     VL+         F  +  P GG+ +D+   P+P  TL A + +DA+LLGAIGG KWD   K  +PE GLL +R+ L +FAN+RP  V   +   S LKKE+ E  D +VVRELTGG+YFG+P+ +      E    ++  Y   E++RI   AFE A  R
Sbjct:    3 YKITSLAGDGIGPEIMTSGLQVLEAVAKKYNHTFEIESHPFGGAGIDVAQDPIPSSTLKACQDADAILLGAIGGPKWDNAPK--RPEDGLLALRKALGLFANIRPIQVPSSITHLSPLKKEIVENTDFVVVRELTGGLYFGEPKHW-----DESAAVDSLTYTRAEIERIIEKAFEIAATR 176          
The following BLAST results are available for this feature:
BLAST of DN621538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 292
Match NameE-valueIdentityDescription
LEU3_STAA32.667e-3542.543-isopropylmalate dehydrogenase OS=Staphylococcus ... [more]
LEU3_BUCBP2.667e-3543.243-isopropylmalate dehydrogenase OS=Buchnera aphidi... [more]
LEU3_NOVAD3.483e-3546.373-isopropylmalate dehydrogenase OS=Novosphingobium... [more]
LEU3_BUCDN3.483e-3544.323-isopropylmalate dehydrogenase OS=Buchnera aphidi... [more]
LEU3_BLOFL3.483e-3542.933-isopropylmalate dehydrogenase OS=Blochmannia flo... [more]
LEU3_DEHSC4.549e-3542.543-isopropylmalate dehydrogenase OS=Dehalococcoides... [more]
LEU3_YAMOH7.759e-3546.553-isopropylmalate dehydrogenase OS=Yamadazyma ohme... [more]
LEU3_CANBO1.013e-3447.703-isopropylmalate dehydrogenase OS=Candida boidini... [more]
LEU3_PSEHT1.323e-3443.723-isopropylmalate dehydrogenase OS=Pseudoalteromon... [more]
LEU3_LISMO1.323e-3443.093-isopropylmalate dehydrogenase OS=Listeria monocy... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06N15_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006N15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621538 ID=DN621538; Name=DN621538; organism=Citrus sinensis; type=EST; length=674bp
GCGGCGTCAGTGCAGCTGAATGCGAAGCTACTTGGACCCGCGTTTATTGT
TAAACCCGCAACCAAACACTTTCTTAAACCGGCAAGAATCAGGTGCGCCG
CTGCTGCCACCGCACCACCCACCAAACGGTACAGCATCACTCTACTCCCC
GGCGATGGCATCGGCCCCGAAGTCATCGCCGTCGCCAAAAACGTCCTCAA
GCTCGCTGGCTCTCTCGAAGGGATTGAATTTGCATTCCAAGAGATGCCAA
TGGGGGGATCAGCCTTGGATTTGGTTGGAGTTCCGTTACCTGAGGAGACA
CTTGCAGCAGCGAAGCAATCTGATGCAGTTCTACTTGGCGCAATTGGAGG
GTATAAATGGGATAAAAATGAGAAACATTTGAAGCCAGAGACTGGATTGC
TTCAGATTCGAGAAGGTCTTAAAGTCTTTGCAAATTTGAGGCCAGCAACT
GTTTTACCACAGTTAGTGGACTCTTCCACTTTGAAGAAGGAGGTTGCTGA
AGGTGTTGACCTTATGGTTGTAAGGGAGCTCACCGGAGGTATTTATTTTG
GAAAGCCCAGGGGCTATGGTGTTACTGAACATGGTGAGGAGATTGGCTTC
AATACAGAGGTTTATGCTGCCTACGAGGTGGATCGTATTGCTCGTGTTGC
TTTTGAGACTGCTCGGAAACGTCA
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