DN621252

Overview
NameDN621252
Unique NameDN621252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUSU (Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.525e-14
Identity = 48/143 (33.57%), Postives = 69/143 (48.25%), Query Frame = -2
Query:  224 YMIMQCLGAICGAAVVKGFQKSQYEMLGGG------ANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAAL 634
            Y + Q LGAI  AA++      +     GG        +   GYS   GL  EI+ T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPARS G AL +    A    W+FW  P +GA + A+
Sbjct:   84 YWVAQVLGAIATAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVAL-FADTAALSQLWLFWVAPLVGAVIGAI 219          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.525e-14
Identity = 48/143 (33.57%), Postives = 69/143 (48.25%), Query Frame = -2
Query:  224 YMIMQCLGAICGAAVVKGFQKSQYEMLGGG------ANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAAL 634
            Y + Q LGAI  AA++      +     GG        +   GYS   GL  EI+ T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPARS G AL +    A    W+FW  P +GA + A+
Sbjct:   84 YWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTWVNPARSTGVAL-FADTAALSQLWLFWVAPLVGAVIGAI 219          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPZ2_RHIME (Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.525e-14
Identity = 53/145 (36.55%), Postives = 73/145 (50.34%), Query Frame = -2
Query:  224 VFYMIMQCLGAICGAAV--VKGFQKSQYEMLGGGANMLSK----GYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAAL 640
            V Y+I Q  GAI  AAV  V    K+ +++    AN   +    GYS    L  E+V TF  +  +  +T  +  A        AP+ IG A+ L+HL +IP+T T +NPARS G AL      A    W+FW  P  GAA+A +
Sbjct:   82 VSYVIAQVAGAIIAAAVLYVIATGKADFQLGSFAANGYGEHSPGGYSLTAALVTEVVMTFFFLIIILGSTHRRVPAG------FAPIAIGLALTLIHLVSIPVTNTSVNPARSTGQALFVG-GWALSQLWLFWIAPLFGAAIAGI 219          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBVU (Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.307e-14
Identity = 48/150 (32.00%), Postives = 72/150 (48.00%), Query Frame = -2
Query:  209 YMIMQCLGAICGAAVV-------KGFQKSQYEMLGGGANMLSKG-YSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIV 634
            Y++ Q +G +    V+        GF  +       G    S G YS    L  E+V T + +  +  ATD +           AP+ IG  + L+HL +IP+T T +NPARS G AL Y  D A    W+FW  P +GA L A+ ++++
Sbjct:   83 YILAQVIGGVIAGGVLYTIASGQMGFDATSSGFASNGYGEHSPGGYSLTSALVTEVVMTMMFLLVILGATDQRAPQG------FAPIAIGLCLTLIHLISIPVTNTSVNPARSTGVAL-YVGDWATAQLWLFWVAPILGALLGAVAYKLI 225          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 5.625e-14
Identity = 53/155 (34.19%), Postives = 78/155 (50.32%), Query Frame = -2
Query:  209 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDG----LGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIV 658
            ++L R + Y I Q LG++    ++            GG  + + G S G G    L  EIV TF LVYTV++ A D K  +  +    +AP+ IGF V    LA    +G  +NPA + G A++      W +HW++WAGP IG  LA + +  V
Sbjct:   99 ITLLRGILYWIAQLLGSVAACFLLS--------FATGGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGSLGT----IAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWVYWAGPLIGGGLAGIIYDFV 238          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPZ_SHEON (Aquaporin Z OS=Shewanella oneidensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.346e-14
Identity = 51/147 (34.69%), Postives = 70/147 (47.62%), Query Frame = -2
Query:  215 YMIMQCLGAICGAAVV-------KGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQ 634
            Y+I Q  G I GA V+       +GF  +      G       GYS    +  EIV T   +  +  +TD +           AP+ IG  + L+HL +IPI+ T +NPARS G AL    D A    W+FWA P IGA LA + ++
Sbjct:   84 YIIAQVAGGIAGAGVLYLIASGQEGFSLAAGFASNGFGEHSPGGYSMISVMICEIVMTLFFLLVILGSTDERAPKG------FAPIAIGLCLTLIHLISIPISNTSVNPARSTGPALFVG-DWAVSQLWLFWAAPIIGAILAGVIYR 223          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.594e-14
Identity = 50/152 (32.89%), Postives = 75/152 (49.34%), Query Frame = -2
Query:  206 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSA-TDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 658
            +S+ RA  Y I Q L +     ++          +G   + L+ G S   G+  EI+ TF L++TV++   D K+ + D   P+L     GF V    LA    +G  +NPARS G AL+      W DHW++W GP IG  LA   ++ V+
Sbjct:   92 ISVFRAFLYWIDQLLASSAACFLLSYLTGG----MGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLT----GFVVGANILAGGAFSGASMNPARSFGPALVSGN---WTDHWVYWVGPLIGGGLAGFIYENVL 232          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPZ_RHOPA (Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.594e-14
Identity = 51/157 (32.48%), Postives = 78/157 (49.68%), Query Frame = -2
Query:  209 YMIMQCLGAICGAAVVKGFQKSQYEMLGGGANM-LSKGYSKGDGLGA--------------EIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIV 634
            Y+I Q LGAI  AA++       Y +  G A   L+KG++  +G GA              E+V T + ++ +  +T  K  A        APL IG A+ ++HL +IP+T T +NPARS G AL      A    W+FW  P +G  L  + ++++
Sbjct:   85 YIIAQVLGAIAAAALL-------YLIASGAAGFDLAKGFAS-NGYGAHSPGQYNLVACFVMEVVMTMMFLFVIMGSTHGKAPAG------FAPLAIGLALVMIHLVSIPVTNTSVNPARSTGPALFVG-GWAIGQLWLFWVAPLLGGVLGGVIYRVL 226          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.253e-13
Identity = 52/152 (34.21%), Postives = 79/152 (51.97%), Query Frame = -2
Query:  218 KLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA---NMLSKGYSKGDGLGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYH 661
            ++++   VFY I Q LG+     ++K        + GG A   + ++ G    +G+  EI+ TF LVYTV++ A D K+ +  +    +APL IG  V    LA  P +G  +NPARS G A+       +  HW++W GP IG  LA L +
Sbjct:   95 QITVITGVFYWIAQLLGSTAACFLLK-------YVTGGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGT----IAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FSGHWVYWVGPLIGGGLAGLIY 232          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBVY (Aquaporin Z OS=Vibrio vulnificus (strain YJ016) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.253e-13
Identity = 48/150 (32.00%), Postives = 71/150 (47.33%), Query Frame = -2
Query:  209 YMIMQCLGAICGAAVV-------KGFQKSQYEMLGGGANMLSKG-YSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIV 634
            Y++ Q +G +    V+        GF  +       G    S G YS    L  EIV   + +  +  ATD +           AP+ IG  + L+HL +IP+T T +NPARS G AL Y  D A    W+FW  P +GA L A+ ++++
Sbjct:   83 YILAQVIGGVIAGGVLYTIASGQMGFDATSSGFASNGYGEHSPGGYSLTSALVTEIVMAMMFLLVILGATDQRAPQG------FAPIAIGLCLTLIHLISIPVTNTSVNPARSTGVAL-YVGDWATAQLWLFWVAPILGALLGAVAYKLI 225          
The following BLAST results are available for this feature:
BLAST of DN621252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 149
Match NameE-valueIdentityDescription
AQPZ_BRUSU2.525e-1433.57Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1[more]
AQPZ_BRUME2.525e-1433.57Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV... [more]
AQPZ2_RHIME2.525e-1436.55Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 ... [more]
AQPZ_VIBVU4.307e-1432.00Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1[more]
TIP12_ARATH5.625e-1434.19Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]
AQPZ_SHEON7.346e-1434.69Aquaporin Z OS=Shewanella oneidensis GN=aqpZ PE=3 ... [more]
TIP41_ARATH9.594e-1432.89Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1... [more]
AQPZ_RHOPA9.594e-1432.48Aquaporin Z OS=Rhodopseudomonas palustris GN=aqpZ ... [more]
TIP21_ARATH1.253e-1334.21Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
AQPZ_VIBVY1.253e-1332.00Aquaporin Z OS=Vibrio vulnificus (strain YJ016) GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H09_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621252 ID=DN621252; Name=DN621252; organism=Citrus sinensis; type=EST; length=665bp
CAATAATTTATTTATAATAGGAATCGGCCATGAACATGTATAGTCATACA
CAATTCAAGAGCCACAAACACCGAAGGGTTGTACATATACAGCAGATAAT
TAAAAGCAAACCCAGTGACAGTGGGCAATTCAACTTCATACATGGCTATT
AATTGAACGGATCGAAATTAATGACTAATCATTTGGACTTGAATGGGATG
GCCCTGATCACAATCTGATGATATAAAGCTGCAAGCGCTGCTCCAATGAA
CGGTCCTGCCCAGAAAATCCAATGATCATCCCAGGCTTGGTCCTTGTTGT
ATATCAGAGCTGCGCCAAGACTCCTTGCTGGGTTAATGCCTGTTCCTGTG
ATAGGAATTGTTGCCAAGTGCACCAAAAACACAGCAAATCCAATGGGCAG
GGGTGCCAATATAGGAACATGAGAATCGCGGGCATTGCGCTTGGCATCAG
TGGCCGAGAAGACAGTGTAAACAAGAACAAAGGTACCAACAATCTCGGCT
CCAAGGCCATCTCCCTTGCTGTAGCCTTTGCTGAGCATGTTGGCACCGCC
GCCTAGCATTTCATATTGGCTTTTCTGAAAGCCCTTTACAACGGCCGCAC
CGCATATGGCCCCTAAACACTGCATTATCATGTAAAAAACTGCCCTGGTA
AGCGACAGCTTTCGG
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