DN621252

Overview
NameDN621252
Unique NameDN621252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.137e-13
Identity = 52/148 (35.14%), Postives = 77/148 (52.03%), Query Frame = -2
Query:  218 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYH 658
            +++   +FY I Q LGA     ++K     +     G A     G S+ +G+  EIV TF LVYTV++ A D K+ +  +    +AP+ IGF V    LA  P +G  +NPARS G A+       +  +W++W GP IG  LA L +
Sbjct:   96 ITILTGLFYWIAQLLGASIACLLLKFVTHGKAIPTHGVA-----GISELEGVVMEIVITFALVYTVYATAADPKKGSLGT----IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGN---FAGNWVYWVGPLIGGGLAGLVY 231          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPA_DICDI (Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.137e-13
Identity = 44/153 (28.76%), Postives = 76/153 (49.67%), Query Frame = -2
Query:  203 KLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIR 661
            ++ L  +++Y+  Q LG I GA ++ G   + Y  +  G   L+ G + G     E++ T +L   V   +    N  D  +  +AP  IG A+F+        +G  +NP R LG ++I      W  HW++W GP +GA LAA  ++ +++
Sbjct:  108 RVGLIDSLYYVAAQILGCIAGAGILYGCLPNMYR-IDLGVPHLAPGMNTGQAFLMEMMLTSILCLCVLGTSVF--NVWDRRLNRIAPFAIGLALFIGVAIGFNFSGGALNPVRVLGPSIISG---VWSHHWVYWLGPIVGAILAAFIYRCLLQ 254          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.791e-13
Identity = 46/155 (29.68%), Postives = 73/155 (47.10%), Query Frame = -2
Query:  200 RKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRA 664
            R +S  RA  Y+  QC G I GAA++ G     Y+     A   S   +  +  G E + TF++V   F +TD  +    +     +   IG A       ++P     +NPARSLG + + NK   WD HW++W GP +G   + L ++ +  +
Sbjct:  137 RSISPIRAAMYITAQCGGGIAGAALLYGVTVPGYQGNLQAAISHSAALAAWERFGVEFILTFLVVLCYFVSTDPMKKFMGN-----SAASIGCAYSACCFVSMPY----LNPARSLGPSFVLNK---WDSHWVYWFGPLVGGMASGLVYEYIFNS 279          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPB_DICDI (Aquaporin B OS=Dictyostelium discoideum GN=wacA PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.791e-13
Identity = 49/152 (32.24%), Postives = 74/152 (48.68%), Query Frame = -2
Query:  206 KLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 661
            ++ +   + ++I QC+GA+ GA ++K    + YE     A  L+ G +   G   E+V T  LV+ V     A  N  D  +  +APL IG AV          TG  +NPARS G A+       W  H+I+W GP  G  +A L+ +I +
Sbjct:  105 RMGILNGIAFIIFQCVGALVGAGMMKASLPTFYER-DLSATTLATGVNVARGFFLEMVTTSFLVFVVLGV--AVYNEWDPKISRVAPLAIGCAVIAGVGFLNLFTGGSLNPARSFGPAVF---SDTWHRHYIYWFGPICGGIIAGLFWRIFL 250          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEAE (Aquaporin Z OS=Pseudomonas aeruginosa GN=aqpZ PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.646e-13
Identity = 49/149 (32.89%), Postives = 73/149 (48.99%), Query Frame = -2
Query:  209 YMIMQCLGAICGAAVV-------KGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIV 634
            Y++ Q LG +    V+        GF  +      G       GYS    L +E+V T + +  +  AT +KR  +       AP+ IG  + L+HL +IP+T T +NPARS   AL Y  D A    W+FW  P +GA L AL ++++
Sbjct:   83 YVVAQVLGGLAAGGVLYLIASGKAGFDLAAGFASNGYGEHSPGGYSLQAALVSEVVLTGMFLLIILGAT-SKRAPQG-----FAPIAIGLTLTLIHLISIPVTNTSVNPARSTAVAL-YVGDWAVSQLWLFWVAPILGAVLGALAYRLI 224          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 4.761e-13
Identity = 49/148 (33.11%), Postives = 76/148 (51.35%), Query Frame = -2
Query:  218 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYH 658
            +++    FY I Q LG+     ++K         L    + ++ G +   G+  EI+ TF LVYTV++ A D K+ +  +    +AP+ IGF V    LA  P +G  +NPARS G A++      +  +WI+WAGP IG  LA   +
Sbjct:   96 ITILTGFFYWIAQLLGSTVACLLLKYVTNG----LAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGSLGT----IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGD---FSQNWIYWAGPLIGGGLAGFIY 232          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.761e-13
Identity = 53/157 (33.76%), Postives = 77/157 (49.04%), Query Frame = -2
Query:  212 KLSLTRAVFYMIMQCLGAICGAAVVKGFQ--KSQYEMLGGGANMLSK----GYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQI 661
            K      V Y++ Q LGA+  AA +      K+  E+ G  AN   +    GYS    L  EI+ T   +  +  +T  +       VP+  AP+ IG A+ L+HL +IP+T T +NPARS G AL      A    W+FW  P +G A+ A+  +I
Sbjct:   75 KFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGSTHGR-------VPVGFAPVAIGLALTLIHLISIPVTNTSVNPARSTGQALFVG-GWALQQLWLFWLAPILGGAIGAVVWKI 223          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.219e-13
Identity = 49/148 (33.11%), Postives = 76/148 (51.35%), Query Frame = -2
Query:  218 LSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYH 658
            +++    FY I Q LG+     ++K         L    + ++ G +   G+  EI+ TF LVYTV++ A D K+ +  +    +AP+ IGF V    LA  P +G  +NPARS G A++      +  +WI+WAGP IG  LA   +
Sbjct:   96 ITILTGFFYWIAQLLGSTVACLLLKYVTNG----LAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGSLGT----IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGD---FSQNWIYWAGPLIGGGLAGFIY 232          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: AQPZ_BRAJA (Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.385e-12
Identity = 50/153 (32.68%), Postives = 69/153 (45.10%), Query Frame = -2
Query:  215 YMIMQCLGAICGAA-------------VVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQ 634
            Y+I Q  GAI  A              V KGF  + Y+    G       YS       E+V T + ++ +  AT  +  A        APL IG A+ ++HL +IP+T T +NPARS G AL      A    W+FW  P IG AL  + ++
Sbjct:   85 YVIAQVCGAIVAAELLYIIASGAPGFDVTKGFASNGYDAHSPGQ------YSMMACFLTEVVMTMMFLFIIMGATHGRAPAG------FAPLAIGLALVMIHLVSIPVTNTSVNPARSTGPALFVG-GWAMAQLWLFWVAPLIGGALGGVIYR 224          
BLAST of DN621252 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.809e-12
Identity = 54/163 (33.13%), Postives = 84/163 (51.53%), Query Frame = -2
Query:  206 KLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQY--------EMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYN--KDQAWDDHWIFWAGPFIGAALAALYHQIVI 661
            ++S+  A+FY   Q + ++    V+K     Q+        EM G GA++L            E V  FVLVYTVF+A+D +R      +P+ + P+ IGF      LA  P +G  +NPA + G+A++Y   K+QA     ++W GP +G A AAL +  V+
Sbjct:   99 RISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEMTGFGASVL------------EGVLAFVLVYTVFTASDPRRG-----LPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSAMVYGSFKNQA-----VYWVGPLLGGATAALVYDNVV 239          
The following BLAST results are available for this feature:
BLAST of DN621252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 149
Match NameE-valueIdentityDescription
TIP21_ORYSJ2.137e-1335.14Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
AQPA_DICDI2.137e-1328.76Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE... [more]
BIB_DROME2.791e-1329.68Neurogenic protein big brain OS=Drosophila melanog... [more]
AQPB_DICDI2.791e-1332.24Aquaporin B OS=Dictyostelium discoideum GN=wacA PE... [more]
AQPZ_PSEAE3.646e-1332.89Aquaporin Z OS=Pseudomonas aeruginosa GN=aqpZ PE=3... [more]
TIP2_TOBAC4.761e-1333.11Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
AQPZ1_AGRT54.761e-1333.76Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain... [more]
TIP1_TOBAC6.219e-1333.11Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
AQPZ_BRAJA1.385e-1232.68Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE... [more]
TIP51_ARATH1.809e-1233.13Probable aquaporin TIP5-1 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06H09_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621252 ID=DN621252; Name=DN621252; organism=Citrus sinensis; type=EST; length=665bp
CAATAATTTATTTATAATAGGAATCGGCCATGAACATGTATAGTCATACA
CAATTCAAGAGCCACAAACACCGAAGGGTTGTACATATACAGCAGATAAT
TAAAAGCAAACCCAGTGACAGTGGGCAATTCAACTTCATACATGGCTATT
AATTGAACGGATCGAAATTAATGACTAATCATTTGGACTTGAATGGGATG
GCCCTGATCACAATCTGATGATATAAAGCTGCAAGCGCTGCTCCAATGAA
CGGTCCTGCCCAGAAAATCCAATGATCATCCCAGGCTTGGTCCTTGTTGT
ATATCAGAGCTGCGCCAAGACTCCTTGCTGGGTTAATGCCTGTTCCTGTG
ATAGGAATTGTTGCCAAGTGCACCAAAAACACAGCAAATCCAATGGGCAG
GGGTGCCAATATAGGAACATGAGAATCGCGGGCATTGCGCTTGGCATCAG
TGGCCGAGAAGACAGTGTAAACAAGAACAAAGGTACCAACAATCTCGGCT
CCAAGGCCATCTCCCTTGCTGTAGCCTTTGCTGAGCATGTTGGCACCGCC
GCCTAGCATTTCATATTGGCTTTTCTGAAAGCCCTTTACAACGGCCGCAC
CGCATATGGCCCCTAAACACTGCATTATCATGTAAAAAACTGCCCTGGTA
AGCGACAGCTTTCGG
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