DN621236
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.059e-23 Identity = 66/170 (38.82%), Postives = 96/170 (56.47%), Query Frame = -2 Query: 239 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK-FVTNGQTT---SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 715 A ISGGH+NPAVTFG F+ +SL R + Y + Q LG+ ++K F N T A ++ G + + EI+ TF LVYTV+ +A D K+ + + +AP+ IGF V LA G +NPA S G A++ +WD+HW++WVGP IG LA + ++ Sbjct: 106 AGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQPNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQ 274
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.059e-23 Identity = 66/170 (38.82%), Postives = 95/170 (55.88%), Query Frame = -2 Query: 239 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTN----GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 715 A ISGGH+NPAVTFG F+ +SL R I Y + Q LG+ ++K G A ++SG + + EIV TF LVYTV+ +A D K+ + + +AP+ IGF V LA G +NPA S G A++ +W++HW++WVGP +G LA I ++ Sbjct: 109 AGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDGLGAEIVGTFILVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQ 277
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: AQP6_MOUSE (Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.059e-23 Identity = 68/168 (40.48%), Postives = 87/168 (51.79%), Query Frame = -2 Query: 236 VAVGANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG---QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIA-IGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 727 V + SG H NPAVT VG +ISL R + Y AQL G+T LL VT G +T + + AV E+V+T LV V+A+ G +P A IG V L G F G SMNPA SFGPA++ + HW++WVGPL G LA ++Y F Sbjct: 67 VQISWKTSGAHANPAVTLAYLVGSHISLPRAMAYIAAQLAGATAGAALLYGVTPGGIRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFASM----DGRQTLASPAAMIGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGKFAVHWIFWVGPLTGAVLASLIYNF 230
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.059e-23 Identity = 66/168 (39.29%), Postives = 94/168 (55.95%), Query Frame = -2 Query: 218 ISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVT--NGQTTSAF-ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWD-NHWVYWVGPLIGGGLAGIVYEFFFINQS 709 +SGGH+NPA+T VG ISLLR Y AQL+G+ +L V N + A AL++ A+V E+++TF L ++A+ + +G+ A ++IG V L G F G SMNPA SFGPA+V + HWV+WVGP++G LA I+Y + S Sbjct: 63 VSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNS 229
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.689e-23 Identity = 70/175 (40.00%), Postives = 96/175 (54.86%), Query Frame = -2 Query: 242 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK--------FVTNGQTTSA--FALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVY 715 A ISGGH+NPAVTFG F+ +SL R + Y + Q LG+ ++K + G T A + SG+GA EI+ TF LVYTV+ +A D K+ + + +AP+ IGF V LA G +NPA S G A++ SWD+HWV+WVGP IG LA + + Sbjct: 106 AGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGA------EIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYH 273
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.689e-23 Identity = 70/175 (40.00%), Postives = 96/175 (54.86%), Query Frame = -2 Query: 242 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLK--------FVTNGQTTSA--FALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVY 715 A ISGGH+NPAVTFG F+ +SL R + Y + Q LG+ ++K + G T A + SG+GA EI+ TF LVYTV+ +A D K+ + + +AP+ IGF V LA G +NPA S G A++ SWD+HWV+WVGP IG LA + + Sbjct: 106 AGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGA------EIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYH 273
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.990e-23 Identity = 64/170 (37.65%), Postives = 95/170 (55.88%), Query Frame = -2 Query: 239 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 715 A ISGGH+NPAVTFG F+ +SL R + Y + Q LG+ ++K G A ++ G + + EI+ TF LVYTV+ +A D K+ + + +AP+ IGF V LA G +NPA S G A++ +W++HW++WVGP+IG LA I ++ Sbjct: 107 AGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFMVGPYQRLGGGANVVNPGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNDEHAWNDHWIFWVGPMIGAALAAIYHQ 275
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 5.990e-23 Identity = 67/169 (39.64%), Postives = 93/169 (55.03%), Query Frame = -2 Query: 242 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTN----GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVY 715 A ISGGH+NPAVTFG F+ +SL R + Y Q LG+ ++K G A A++ G + + EIV TF LVYTV+ +A D K+ + + +AP+ IGF V LA G +NPA S G A+V + +W +HW++WVGP IG LA I + Sbjct: 108 AGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQRGLYMGSGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRAHAWHDHWIFWVGPFIGAALAAIYH 275
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.990e-23 Identity = 67/170 (39.41%), Postives = 93/170 (54.71%), Query Frame = -2 Query: 239 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTN----GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 715 A ISGGH+NPAVTFG F+ +SL R I Y I Q LG+ ++K G A ++ G + + EIV TF LVYTV+ +A D K+ + + +AP+ IGF V LA G +NPA S G A++ +W +HW++WVGP IG LA I ++ Sbjct: 112 AGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWSDHWIFWVGPFIGAALAAIYHQ 280
BLAST of DN621236 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.990e-23 Identity = 66/170 (38.82%), Postives = 94/170 (55.29%), Query Frame = -2 Query: 239 ANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTN----GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 715 A ISGGH+NPAVTFG F+ +SL R + Y I Q LG+ ++K G A ++ G + + EIV TF LVYTV+ +A D K+ + + +AP+ IGF V LA G +NPA S G A++ +W++HW++WVGP IG LA I ++ Sbjct: 109 AGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIFWVGPFIGAALAAIYHQ 277 The following BLAST results are available for this feature:
BLAST of DN621236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621236 ID=DN621236; Name=DN621236; organism=Citrus sinensis; type=EST; length=728bpback to top |