DN621146

Overview
NameDN621146
Unique NameDN621146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBE2S_BOVIN (Ubiquitin-conjugating enzyme E2 S OS=Bos taurus GN=UBE2S PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.867e-21
Identity = 50/119 (42.02%), Postives = 70/119 (58.82%), Query Frame = -3 
Query:  351 PVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQ 707
            P  ED+   Q TI GP  +PYAGG+F + +    D+P  PPK  F TK+FHPN+ +NG IC+++LK  W+  L I  VLL+I  LL  PNP+  L  E   +   +  +Y + AR  T+
Sbjct:   35 PNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153
[Close]
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UB2G2_PONAB (Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii GN=UBE2G2 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.867e-21
Identity = 50/136 (36.76%), Postives = 78/136 (57.35%), Query Frame = -3 
Query:  348 AGPVAED-MFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQK 713
            AGP+ E+  F W+A IMGP D+ +  GVF   + FP DYP  PPK+ F  ++FHPNI  +G +C+ IL              E+WSP  ++ K+LLS+ S+L +PN +     + + M++ D+ ++   A+   QK
Sbjct:   26 AGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 161
[Close]
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UB2G2_MOUSE (Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus GN=Ube2g2 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.867e-21
Identity = 50/136 (36.76%), Postives = 78/136 (57.35%), Query Frame = -3 
Query:  348 AGPVAED-MFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQK 713
            AGP+ E+  F W+A IMGP D+ +  GVF   + FP DYP  PPK+ F  ++FHPNI  +G +C+ IL              E+WSP  ++ K+LLS+ S+L +PN +     + + M++ D+ ++   A+   QK
Sbjct:   26 AGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 161
[Close]
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UB2G2_HUMAN (Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens GN=UBE2G2 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.867e-21
Identity = 50/136 (36.76%), Postives = 78/136 (57.35%), Query Frame = -3 
Query:  348 AGPVAED-MFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQK 713
            AGP+ E+  F W+A IMGP D+ +  GVF   + FP DYP  PPK+ F  ++FHPNI  +G +C+ IL              E+WSP  ++ K+LLS+ S+L +PN +     + + M++ D+ ++   A+   QK
Sbjct:   26 AGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQIVQK 161
[Close]
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBE2S_RAT (Ubiquitin-conjugating enzyme E2 S OS=Rattus norvegicus GN=Ube2s PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.184e-21
Identity = 50/119 (42.02%), Postives = 69/119 (57.98%), Query Frame = -3 
Query:  351 PVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQ 707
            P  ED+   Q TI GP  +PYAGG+F + +    D+P  PPK  F TK+FHPN+  NG IC+++LK  W+  L I  VLL+I  LL  PNP+  L  E   +   +  +Y + AR  T+
Sbjct:   35 PNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153
[Close]
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBE2S_MOUSE (Ubiquitin-conjugating enzyme E2 S OS=Mus musculus GN=Ube2s PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.184e-21
Identity = 50/119 (42.02%), Postives = 69/119 (57.98%), Query Frame = -3 
Query:  351 PVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQ 707
            P  ED+   Q TI GP  +PYAGG+F + +    D+P  PPK  F TK+FHPN+  NG IC+++LK  W+  L I  VLL+I  LL  PNP+  L  E   +   +  +Y + AR  T+
Sbjct:   35 PNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153
[Close]
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UB2SA_XENLA (Ubiquitin-conjugating enzyme E2 S-A OS=Xenopus laevis GN=ube2s-A PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.184e-21
Identity = 50/119 (42.02%), Postives = 69/119 (57.98%), Query Frame = -3 
Query:  351 PVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQ 707
            P  ED+   Q TI GP  +PYAGG+F + +    D+P  PPK  F TK+FHPN+  NG IC+++LK  W+  L I  VLL+I  LL  PNP+  L  E   +   +  +Y + AR  T+
Sbjct:   35 PNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153
[Close]
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBC9_XENTR (SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis GN=ube2i PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.159e-21
Identity = 46/120 (38.33%), Postives = 72/120 (60.00%), Query Frame = -3 
Query:  342 DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYA 695
            ++ +W+  I G   +P+ GG+F + + F  DYP  PPK  F   +FHPN+  +G++CL IL+E   W PA+TI ++LL I  LL +PN  DP   E   +Y  ++ +YE   R+  +K+A
Sbjct:   37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156
[Close]
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBC9_XENLA (SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=ube2i PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.159e-21
Identity = 46/120 (38.33%), Postives = 72/120 (60.00%), Query Frame = -3 
Query:  342 DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYA 695
            ++ +W+  I G   +P+ GG+F + + F  DYP  PPK  F   +FHPN+  +G++CL IL+E   W PA+TI ++LL I  LL +PN  DP   E   +Y  ++ +YE   R+  +K+A
Sbjct:   37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156
[Close]
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBC9_SPETR (SUMO-conjugating enzyme UBC9 OS=Spermophilus tridecemlineatus GN=UBE2I PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.159e-21
Identity = 46/120 (38.33%), Postives = 72/120 (60.00%), Query Frame = -3 
Query:  342 DMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYA 695
            ++ +W+  I G   +P+ GG+F + + F  DYP  PPK  F   +FHPN+  +G++CL IL+E   W PA+TI ++LL I  LL +PN  DP   E   +Y  ++ +YE   R+  +K+A
Sbjct:   37 NLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156
The following BLAST results are available for this feature:
BLAST of DN621146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
UBE2S_BOVIN1.867e-2142.02Ubiquitin-conjugating enzyme E2 S OS=Bos taurus GN... [more]
UB2G2_PONAB1.867e-2136.76Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii... [more]
UB2G2_MOUSE1.867e-2136.76Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus... [more]
UB2G2_HUMAN1.867e-2136.76Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens... [more]
UBE2S_RAT3.184e-2142.02Ubiquitin-conjugating enzyme E2 S OS=Rattus norveg... [more]
UBE2S_MOUSE3.184e-2142.02Ubiquitin-conjugating enzyme E2 S OS=Mus musculus ... [more]
UB2SA_XENLA3.184e-2142.02Ubiquitin-conjugating enzyme E2 S-A OS=Xenopus lae... [more]
UBC9_XENTR4.159e-2138.33SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis... [more]
UBC9_XENLA4.159e-2138.33SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=... [more]
UBC9_SPETR4.159e-2138.33SUMO-conjugating enzyme UBC9 OS=Spermophilus tride... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06F01_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621146 ID=DN621146; Name=DN621146; organism=Citrus sinensis; type=EST; length=718bp
TTTTTTTTTAAACACGGATAAAATTGCAATCTCATAAGCAGCTTAAAGCT
AGAGCAAACAGTAATTTAAACAGAACTGTTTGAGATACATGGTAAACAAA
TGCGTGCACCCAAGAACATTAAGTCATAAACCACTGATCTTACAAGATCA
ATGTCAACACAAGCAAGCTACAATACAACATCAATCTTGTTTTGATGGAA
GACAGTGCATGAACACCATCTTCAATTATCATTTCCAAAAGGCAAAAACA
AAGACGGAAGACGAGCATATCACACTTCATTTTATACATAAATATTATGT
GATGAAAGACTATGTCCTAGATGATTTCATACTTAGCCCATGGCATACTT
TTGGGTCCAGCTCCTAGCAGTTGATTCATACTTAGCCTTGTCTGTCTTGT
ACATGTGAGCTATTTCTGGCACCAAAGGGTCATCTGGGTTTGGGTCCGTC
AACAATGAACAAATTGAGAGCAATACCTTAGATATAGTGAGGGCAGGACT
CCACTGCTCTTTTAGTATGTCGAGACATATACTGCCATTGCTGTTAATAT
TTGGGTGAAAAACCTTGGTCCTAAACGCGACCTTAGGTGGTTTGAATGGA
TAATCAGGAGGGAAATGGATTGAAACTAGAAATACACCTCCTGCATAAGG
ACTATCTGGGGGGCCCATTATGGTTGCTTGCCAATGAAACATGTCTTCAG
CCACAGGACCAGCACTGC
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