DN621146
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.960e-43 Identity = 80/125 (64.00%), Postives = 99/125 (79.20%), Query Frame = -3 Query: 342 SAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYA 716 SAGP ++++ W++TI+GPP S Y GGVF + I F DYPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV IA Y T++A+++ AR WT++YA Sbjct: 82 SAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UB2E3_BOVIN (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.960e-43 Identity = 80/125 (64.00%), Postives = 99/125 (79.20%), Query Frame = -3 Query: 342 SAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYA 716 SAGP ++++ W++TI+GPP S Y GGVF + I F DYPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV IA Y T++A+++ AR WT++YA Sbjct: 82 SAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTNRAEHDRIARQWTKRYA 206
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.865e-43 Identity = 79/125 (63.20%), Postives = 98/125 (78.40%), Query Frame = -3 Query: 342 SAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYA 716 SAGP ++++ W +TI+GPP S Y GGVF + IHF P+YPFKPPKV FRT+++H NINS G ICLDILK+ WSPALTISKVLLSICSLLTD NP DPLV IA Y ++ +++ AR WT++YA Sbjct: 107 SAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREEHDRIARLWTKRYA 231
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.222e-37 Identity = 66/125 (52.80%), Postives = 92/125 (73.60%), Query Frame = -3 Query: 342 SAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYA 716 S G + +++ W A I GP +PY GG+F +SI FP DYPFKPPK F+T ++HPNIN GSIC++ILK++W+PAL + KVLLSI LL PNPDDPLVPEI ++K ++ +++ AR +T ++A Sbjct: 28 SIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAREFTARHA 152
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.127e-34 Identity = 60/125 (48.00%), Postives = 92/125 (73.60%), Query Frame = -3 Query: 342 SAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYA 716 SAGP ++++HW ATI+GP +PY GG+F + I FP DYPFKPPK+ F+T+++H N+++ G + ++IL++ WSPALTI+KVL +I S+ P P P +P IA +Y TD+ K++ A+ WT ++A Sbjct: 57 SAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFA 181
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.736e-33 Identity = 67/127 (52.76%), Postives = 88/127 (69.29%), Query Frame = -3 Query: 336 SAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYAMG 716 SA P E+M ++ I+GP SPY GGVF + + P +YP PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL IA +K+++A+ TA+ WT+ YA G Sbjct: 26 SASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYASG 152
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.055e-32 Identity = 66/127 (51.97%), Postives = 88/127 (69.29%), Query Frame = -3 Query: 336 SAGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYAMG 716 SA P ++M ++ I+GP SPY GGVF + + P +YP PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL IA +K+++A+ TA+ WT+ YA G Sbjct: 26 SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEWTRLYASG 152
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBE2N_MACFA (Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.350e-32 Identity = 63/125 (50.40%), Postives = 87/125 (69.60%), Query Frame = -3 Query: 339 AGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYAM 713 A P + ++ I GP DSP+ GG F + + P +YP PKV F TK++HPN++ +G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++A +KT++A+ TAR+WT+ YAM Sbjct: 25 AEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKSGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 149
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.839e-32 Identity = 63/125 (50.40%), Postives = 86/125 (68.80%), Query Frame = -3 Query: 339 AGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYAM 713 A P + ++ I GP DSP+ GG F + + P +YP PKV F TK++HPN++ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++A +KT++A+ TAR+WT+ YAM Sbjct: 25 AEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 149
BLAST of DN621146 vs. ExPASy Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.839e-32 Identity = 63/125 (50.40%), Postives = 86/125 (68.80%), Query Frame = -3 Query: 339 AGPVAEDMFHWQATIMGPPDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKAKYESTARSWTQKYAM 713 A P + ++ I GP DSP+ GG F + + P +YP PKV F TK++HPN++ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++A +KT++A+ TAR+WT+ YAM Sbjct: 25 AEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAM 149 The following BLAST results are available for this feature:
BLAST of DN621146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 253
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621146 ID=DN621146; Name=DN621146; organism=Citrus sinensis; type=EST; length=718bpback to top |