FC922054

Overview
NameFC922054
Unique NameFC922054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_SHEPW (Iron--sulfur cluster insertion protein erpA OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=erpA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12
Identity = 36/104 (34.62%), Postives = 61/104 (58.65%), Query Frame = 3
Query:  129 VTLTDSAASRVRHLLQQRQRPYLKLGVKARG--CNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            ++ TD+AA +V+ LL + +   LKL V   G  C+G  Y   + ++  + D  VE +GV++++DP +L +++G ++D+      S F   NPN+   CGCG SF
Sbjct:   11 ISFTDAAALKVKTLLDEEENDALKLRVYVTGGGCSGFQYGFTFDEKVNEGDFTVEKQGVQLVVDPMSLQYLVGGEVDYTSGLEGSRFFVKNPNATTTCGCGASF 114          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_RALEJ (Putative iron-sulfur cluster insertion protein erpA OS=Ralstonia eutropha (strain JMP134) GN=erpA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12
Identity = 36/101 (35.64%), Postives = 59/101 (58.42%), Query Frame = 3
Query:  138 TDSAASRVRHLLQQRQRPYLKLGV--KARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            TDSAA +V+ L+++     LKL V  +  GC+G  Y   + +E  + D  +   GV +LID  +  +++G ++D+ +D   ++FV  NPN+   CGCG SF
Sbjct:   20 TDSAADKVKQLIEEEGNAELKLRVFVQGGGCSGFQYGFTFDEEVNEDDTTMVKNGVTLLIDSMSYQYLVGAEIDYKEDINGAQFVIKNPNASTTCGCGSSF 120          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_RALEH (Putative iron-sulfur cluster insertion protein erpA OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=erpA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12
Identity = 36/101 (35.64%), Postives = 59/101 (58.42%), Query Frame = 3
Query:  138 TDSAASRVRHLLQQRQRPYLKLGV--KARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            TDSAA +V+ L+++     LKL V  +  GC+G  Y   + +E  + D  +   GV +LID  +  +++G ++D+ +D   ++FV  NPN+   CGCG SF
Sbjct:   20 TDSAADKVKQLIEEEGNAELKLRVFVQGGGCSGFQYGFTFDEEVNEDDTTMVKNGVTLLIDSMSYQYLVGAEIDYKEDINGAQFVIKNPNASTTCGCGSSF 120          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_NITEC (Putative iron-sulfur cluster insertion protein erpA OS=Nitrosomonas eutropha (strain C91) GN=erpA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12
Identity = 34/101 (33.66%), Postives = 62/101 (61.39%), Query Frame = 3
Query:  138 TDSAASRVRHLLQQRQRPYLKLGV--KARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            TDSAAS+V+ L+++     LKL V     GC+G  Y   + +   + D ++E +GV++L+D  ++ +++G ++D+ ++   ++FV  NP +   CGCG SF
Sbjct:   19 TDSAASKVKELIEEEANQALKLRVFVSGGGCSGFQYGFTFDEIINEDDFVIEKQGVRLLVDSMSVQYLLGAEIDYQENAQGAQFVIKNPAAASTCGCGSSF 119          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_HERAR (Putative iron-sulfur cluster insertion protein erpA OS=Herminiimonas arsenicoxydans GN=erpA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12
Identity = 36/104 (34.62%), Postives = 60/104 (57.69%), Query Frame = 3
Query:  129 VTLTDSAASRVRHLLQQRQRPYLKLGV--KARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            +  +DSAA++V  L++    P LKL V  +  GC+G  Y   + +   + D  +   GV++LID  +  +++G ++D+ DD   ++FV  NPN+   CGCG SF
Sbjct:   11 ILFSDSAAAKVAELIEDEGNPDLKLRVFVQGGGCSGFQYGFTFDEIVNEDDTTMTKNGVQLLIDSMSYQYLVGAEIDYKDDLEGAQFVIKNPNATTTCGCGSSF 114          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_DELAS (Putative iron--sulfur cluster insertion protein erpA OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=erpA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12
Identity = 36/104 (34.62%), Postives = 58/104 (55.77%), Query Frame = 3
Query:  129 VTLTDSAASRVRHLLQQRQRPYLKLGV--KARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            +  TDSAA++V  L+ +   P LKL V  +  GC+G  Y   + +     D  +   GV +LID  +  +++G ++D+ +D   ++FV  NPN+   CGCG SF
Sbjct:   19 IVFTDSAAAKVADLIAEEGNPDLKLRVFVQGGGCSGFQYGFTFDEITNDDDTTMTKNGVSLLIDAMSYQYLVGAEIDYKEDLQGAQFVIKNPNASTTCGCGSSF 122          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_CUPTR (Putative iron--sulfur cluster insertion protein erpA OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=erpA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12
Identity = 36/101 (35.64%), Postives = 59/101 (58.42%), Query Frame = 3
Query:  138 TDSAASRVRHLLQQRQRPYLKLGV--KARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            TDSAA +V+ L+++     LKL V  +  GC+G  Y   + +E  + D  +   GV +LID  +  +++G ++D+ +D   ++FV  NPN+   CGCG SF
Sbjct:   20 TDSAADKVKQLIEEEGNAELKLRVFVQGGGCSGFQYGFTFDEEVNEDDTTMVKNGVTLLIDSMSYQYLVGAEIDYKEDINGAQFVIKNPNASTTCGCGSSF 120          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_COXBN (Iron--sulfur cluster insertion protein erpA OS=Coxiella burnetii (strain Dugway 5J108-111) GN=erpA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12
Identity = 42/120 (35.00%), Postives = 66/120 (55.00%), Query Frame = 3
Query:  129 VTLTDSAASRVRHLLQQRQRPYLKLGV--KARGCNGLSYTLNYADERAKFDELV---------EDKG-------VKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            +  T++AA +V+ L+ +   PYL L V     GC+G  Y   + DE    D+LV         +D+G       VK+L+DP +L ++ G ++D+ +D   ++FV  NPN+K  CGCG SF
Sbjct:   14 LVFTEAAARKVKGLIDEENNPYLNLRVFITGGGCSGFQYGFTF-DEAINSDDLVIEKQLEEEDDDEGGTGQMALVKLLVDPLSLQYLQGAEIDYHEDVSGAQFVIRNPNAKTTCGCGSSF 132          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_ALTMD (Iron--sulfur cluster insertion protein erpA OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=erpA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.686e-12
Identity = 35/104 (33.65%), Postives = 61/104 (58.65%), Query Frame = 3
Query:  129 VTLTDSAASRVRHLLQQRQRPYLKLGVKARG--CNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            +  +D+AA++V+ L+ + + P LKL V   G  C+G  Y   + ++  + D  +E   V +++DP +L +++G  +D+VD    S F+  NPN+   CGCG SF
Sbjct:   11 IEFSDAAAAKVKTLVSEEENPDLKLRVYVTGGGCSGFQYGFTFDEKVNEGDMTIEKDSVTLVVDPMSLQYLVGGVVDYVDGLEGSRFLVQNPNATTTCGCGASF 114          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_THIDA (Putative iron-sulfur cluster insertion protein erpA OS=Thiobacillus denitrificans (strain ATCC 25259) GN=erpA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.202e-12
Identity = 35/104 (33.65%), Postives = 59/104 (56.73%), Query Frame = 3
Query:  129 VTLTDSAASRVRHLLQQRQRPYLKLGV--KARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            +  TDSAAS+V+ L+ +   P LKL V     GC+G  Y   + + +   D ++   GV +L+D  +  +++G ++D+ +    ++FV  NPN+   CGCG SF
Sbjct:   11 LVFTDSAASKVKSLIDEEGNPDLKLRVFVSGGGCSGFQYGFTFDEAQNADDTVMVKNGVTLLVDSMSFQYLVGAEIDYSEGLEGAQFVIKNPNATTTCGCGSSF 114          
The following BLAST results are available for this feature:
BLAST of FC922054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
ERPA_SHEPW1.686e-1234.62Iron--sulfur cluster insertion protein erpA OS=She... [more]
ERPA_RALEJ1.686e-1235.64Putative iron-sulfur cluster insertion protein erp... [more]
ERPA_RALEH1.686e-1235.64Putative iron-sulfur cluster insertion protein erp... [more]
ERPA_NITEC1.686e-1233.66Putative iron-sulfur cluster insertion protein erp... [more]
ERPA_HERAR1.686e-1234.62Putative iron-sulfur cluster insertion protein erp... [more]
ERPA_DELAS1.686e-1234.62Putative iron--sulfur cluster insertion protein er... [more]
ERPA_CUPTR1.686e-1235.64Putative iron--sulfur cluster insertion protein er... [more]
ERPA_COXBN1.686e-1235.00Iron--sulfur cluster insertion protein erpA OS=Cox... [more]
ERPA_ALTMD1.686e-1233.65Iron--sulfur cluster insertion protein erpA OS=Alt... [more]
ERPA_THIDA2.202e-1233.65Putative iron-sulfur cluster insertion protein erp... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1DA06RM1 SLH Citrus sinensis cDNA clone KN0AAM1DA06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922054 ID=FC922054; Name=FC922054; organism=Citrus sinensis; type=EST; length=740bp
AATTTTCTTTTTTTGAAAAAAAAGGAAATTAAATAGAAAAAGATTGCGTG
ACATTTTGGATATGATCGATGGCTTCGTTTCTGGCGCAAGCCGCTGAGAA
AATCGGACCGGCCGTTAGGCGGCAGGCCGTGACGTTAACAGACTCCGCCG
CATCTAGAGTACGTCACCTCCTCCAGCAACGCCAGCGACCTTACCTCAAG
CTCGGCGTCAAGGCCCGTGGCTGCAACGGCTTGTCCTACACCCTCAATTA
CGCCGATGAGAGAGCTAAGTTTGATGAGTTGGTTGAGGATAAGGGTGTGA
AGATACTGATTGATCCAAAAGCTCTCATGCACGTTATTGGGACCAAAATG
GATTTTGTAGATGATAAGCTCAGGTCTGAGTTTGTATTCATTAATCCAAA
CTCTAAAGGGCAGTGTGGTTGTGGTGAATCCTTTATGACAACCAGCAGTA
GTGGAGCGTCTAAGCAGGGTGGAAGCTAGGGATTCTTACAAACTAATAGT
ACATGAAGAATGAACGTAGATGATTCTTTTCCCTGGCTGGCCAAGCATTA
CGCACTTGTCTGAAGGTTGTGAATGAAAGGTAGACATCCTCGGTGAGCTT
TAATGGCAGTTGGAGCAACAGGGGCTTTACTAATTCACGTCCTGGGAATC
ATTGCTGTTTTGCCGTCTACAAACAAATTTGTAAAACTATTGTAGCATTT
TTTTTCCTGGTTTTGACAAAAATACCTTTGTAACCTGATT
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