FC922054

Overview
NameFC922054
Unique NameFC922054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_FRATO (Iron-sulfur cluster insertion protein erpA OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=erpA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.427e-11
Identity = 33/104 (31.73%), Postives = 59/104 (56.73%), Query Frame = 3
Query:  129 VTLTDSAASRVRHLLQQRQRPYLKLGV--KARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            +  T++A+ +V+ L+++     L L V     GC+G  Y   + +E  + D ++   GV++L+D  +  +++G  +D+ DD   + FV  NPN+K  CGCG SF
Sbjct:   11 INFTEAASLKVKELIEEEGDNSLSLRVYITGGGCSGFQYAFAFDNEVKEDDMVITKNGVRLLVDSMSFQYLVGADVDYKDDVEGAYFVIRNPNAKTTCGCGSSF 114          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_FRATN (Iron-sulfur cluster insertion protein erpA OS=Francisella tularensis subsp. novicida (strain U112) GN=erpA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.427e-11
Identity = 33/104 (31.73%), Postives = 59/104 (56.73%), Query Frame = 3
Query:  129 VTLTDSAASRVRHLLQQRQRPYLKLGV--KARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            +  T++A+ +V+ L+++     L L V     GC+G  Y   + +E  + D ++   GV++L+D  +  +++G  +D+ DD   + FV  NPN+K  CGCG SF
Sbjct:   11 INFTEAASLKVKELIEEEGDNSLSLRVYITGGGCSGFQYAFAFDNEVKEDDMVITKNGVRLLVDSMSFQYLVGADVDYKDDVEGAYFVIRNPNAKTTCGCGSSF 114          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_FRATM (Iron--sulfur cluster insertion protein erpA OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=erpA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.427e-11
Identity = 33/104 (31.73%), Postives = 59/104 (56.73%), Query Frame = 3
Query:  129 VTLTDSAASRVRHLLQQRQRPYLKLGV--KARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            +  T++A+ +V+ L+++     L L V     GC+G  Y   + +E  + D ++   GV++L+D  +  +++G  +D+ DD   + FV  NPN+K  CGCG SF
Sbjct:   11 INFTEAASLKVKELIEEEGDNSLSLRVYITGGGCSGFQYAFAFDNEVKEDDMVITKNGVRLLVDSMSFQYLVGADVDYKDDVEGAYFVIRNPNAKTTCGCGSSF 114          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_FRATH (Iron-sulfur cluster insertion protein erpA OS=Francisella tularensis subsp. holarctica (strain LVS) GN=erpA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.427e-11
Identity = 33/104 (31.73%), Postives = 59/104 (56.73%), Query Frame = 3
Query:  129 VTLTDSAASRVRHLLQQRQRPYLKLGV--KARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            +  T++A+ +V+ L+++     L L V     GC+G  Y   + +E  + D ++   GV++L+D  +  +++G  +D+ DD   + FV  NPN+K  CGCG SF
Sbjct:   11 INFTEAASLKVKELIEEEGDNSLSLRVYITGGGCSGFQYAFAFDNEVKEDDMVITKNGVRLLVDSMSFQYLVGADVDYKDDVEGAYFVIRNPNAKTTCGCGSSF 114          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_FRATF (Iron-sulfur cluster insertion protein erpA OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=erpA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.427e-11
Identity = 33/104 (31.73%), Postives = 59/104 (56.73%), Query Frame = 3
Query:  129 VTLTDSAASRVRHLLQQRQRPYLKLGV--KARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            +  T++A+ +V+ L+++     L L V     GC+G  Y   + +E  + D ++   GV++L+D  +  +++G  +D+ DD   + FV  NPN+K  CGCG SF
Sbjct:   11 INFTEAASLKVKELIEEEGDNSLSLRVYITGGGCSGFQYAFAFDNEVKEDDMVITKNGVRLLVDSMSFQYLVGADVDYKDDVEGAYFVIRNPNAKTTCGCGSSF 114          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_FRAT1 (Iron-sulfur cluster insertion protein erpA OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=erpA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.427e-11
Identity = 33/104 (31.73%), Postives = 59/104 (56.73%), Query Frame = 3
Query:  129 VTLTDSAASRVRHLLQQRQRPYLKLGV--KARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            +  T++A+ +V+ L+++     L L V     GC+G  Y   + +E  + D ++   GV++L+D  +  +++G  +D+ DD   + FV  NPN+K  CGCG SF
Sbjct:   11 INFTEAASLKVKELIEEEGDNSLSLRVYITGGGCSGFQYAFAFDNEVKEDDMVITKNGVRLLVDSMSFQYLVGADVDYKDDVEGAYFVIRNPNAKTTCGCGSSF 114          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA2_BURXL (Putative iron-sulfur cluster insertion protein erpA 2 OS=Burkholderia xenovorans (strain LB400) GN=erpA2 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.427e-11
Identity = 37/101 (36.63%), Postives = 55/101 (54.46%), Query Frame = 3
Query:  138 TDSAASRVRHLLQQRQRPYLKLG--VKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            T  AA++V  L+++   P LKL   V   GC+G  Y   + D+ A  D      GV +L+D  +L ++ G ++D+ D    S FV  NPN++  CGCG SF
Sbjct:   22 TRQAAAKVASLIEEEGNPNLKLRLYVSGGGCSGFQYGFAFDDQVADDDMQTVTDGVTLLVDSMSLQYLPGARVDYEDGLEGSRFVIHNPNAQSTCGCGSSF 122          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA2_BURVG (Putative iron-sulfur cluster insertion protein erpA 2 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=erpA2 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.427e-11
Identity = 41/120 (34.17%), Postives = 59/120 (49.17%), Query Frame = 3
Query:   81 LAQAAEKIGPAVRRQAVTLTDSAASRVRHLLQQRQRPYLKLG--VKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            L Q +    P      +  T +AA++V  L+     P LKL   V   GC+G  Y   + D+ A  D  V   GV +LID  +  ++ G ++D+ D    S FV  NPN++  CGCG SF
Sbjct:    3 LLQPSADAAPVPLPAFLDFTPNAAAKVAALIDAEGNPQLKLRLYVSGGGCSGFQYGFAFDDQVADDDLQVVTDGVTLLIDAMSRQYLAGARVDYEDGLEGSRFVIQNPNAQSTCGCGSSF 122          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_PSYCK (Iron-sulfur cluster insertion protein erpA OS=Psychrobacter cryohalolentis (strain K5) GN=erpA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.864e-11
Identity = 37/121 (30.58%), Postives = 66/121 (54.55%), Query Frame = 3
Query:   78 FLAQAAEKIGPAVRRQAVTLTDSAASRVRHLLQQR--QRPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            F   +++ + P V    + LTDSAA +VR L ++       L++ V   GC+G SY  N+A+E  + D   ++  V +++D  +  ++ G+ +D+ +    + F+  NPN+   CGCG SF
Sbjct:    8 FNPSSSQPVDPTV----LNLTDSAAQKVRRLREEEGDSNLMLRVYVTGGGCSGFSYGFNFANELNEDDANFDNNDVTLVVDSLSYQYLQGSTVDYTEGLEGARFIVTNPNATTTCGCGSSF 124          
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ERPA_PSYA2 (Iron-sulfur cluster insertion protein erpA OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=erpA PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.864e-11
Identity = 37/121 (30.58%), Postives = 66/121 (54.55%), Query Frame = 3
Query:   78 FLAQAAEKIGPAVRRQAVTLTDSAASRVRHLLQQR--QRPYLKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            F   +++ + P V    + LTDSAA +VR L ++       L++ V   GC+G SY  N+A+E  + D   ++  V +++D  +  ++ G+ +D+ +    + F+  NPN+   CGCG SF
Sbjct:    8 FNPSSSQPVDPTV----LNLTDSAAQKVRRLREEEGDSNLMLRVYVTGGGCSGFSYGFNFANELNEDDANFDNNDVTLVVDSLSYQYLQGSTVDYTEGLEGARFIVTNPNATTTCGCGSSF 124          
The following BLAST results are available for this feature:
BLAST of FC922054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
ERPA_FRATO1.427e-1131.73Iron-sulfur cluster insertion protein erpA OS=Fran... [more]
ERPA_FRATN1.427e-1131.73Iron-sulfur cluster insertion protein erpA OS=Fran... [more]
ERPA_FRATM1.427e-1131.73Iron--sulfur cluster insertion protein erpA OS=Fra... [more]
ERPA_FRATH1.427e-1131.73Iron-sulfur cluster insertion protein erpA OS=Fran... [more]
ERPA_FRATF1.427e-1131.73Iron-sulfur cluster insertion protein erpA OS=Fran... [more]
ERPA_FRAT11.427e-1131.73Iron-sulfur cluster insertion protein erpA OS=Fran... [more]
ERPA2_BURXL1.427e-1136.63Putative iron-sulfur cluster insertion protein erp... [more]
ERPA2_BURVG1.427e-1134.17Putative iron-sulfur cluster insertion protein erp... [more]
ERPA_PSYCK1.864e-1130.58Iron-sulfur cluster insertion protein erpA OS=Psyc... [more]
ERPA_PSYA21.864e-1130.58Iron-sulfur cluster insertion protein erpA OS=Psyc... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1DA06RM1 SLH Citrus sinensis cDNA clone KN0AAM1DA06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922054 ID=FC922054; Name=FC922054; organism=Citrus sinensis; type=EST; length=740bp
AATTTTCTTTTTTTGAAAAAAAAGGAAATTAAATAGAAAAAGATTGCGTG
ACATTTTGGATATGATCGATGGCTTCGTTTCTGGCGCAAGCCGCTGAGAA
AATCGGACCGGCCGTTAGGCGGCAGGCCGTGACGTTAACAGACTCCGCCG
CATCTAGAGTACGTCACCTCCTCCAGCAACGCCAGCGACCTTACCTCAAG
CTCGGCGTCAAGGCCCGTGGCTGCAACGGCTTGTCCTACACCCTCAATTA
CGCCGATGAGAGAGCTAAGTTTGATGAGTTGGTTGAGGATAAGGGTGTGA
AGATACTGATTGATCCAAAAGCTCTCATGCACGTTATTGGGACCAAAATG
GATTTTGTAGATGATAAGCTCAGGTCTGAGTTTGTATTCATTAATCCAAA
CTCTAAAGGGCAGTGTGGTTGTGGTGAATCCTTTATGACAACCAGCAGTA
GTGGAGCGTCTAAGCAGGGTGGAAGCTAGGGATTCTTACAAACTAATAGT
ACATGAAGAATGAACGTAGATGATTCTTTTCCCTGGCTGGCCAAGCATTA
CGCACTTGTCTGAAGGTTGTGAATGAAAGGTAGACATCCTCGGTGAGCTT
TAATGGCAGTTGGAGCAACAGGGGCTTTACTAATTCACGTCCTGGGAATC
ATTGCTGTTTTGCCGTCTACAAACAAATTTGTAAAACTATTGTAGCATTT
TTTTTCCTGGTTTTGACAAAAATACCTTTGTAACCTGATT
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