FC922054

Overview
NameFC922054
Unique NameFC922054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ISCA_ECOL5 (Iron-binding protein iscA OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=iscA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.066e-22
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 
Query:  126 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            ++TL+DSAA+RV   L  R + + L+LGV+  GC+G++Y L + DE    D + EDKGVK+++D K+L  + GT++DFV + L   F F NPN K +CGCGESF
Sbjct:    2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
[Close]
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ISCA_ECOK1 (Iron-binding protein iscA OS=Escherichia coli O1:K1 / APEC GN=iscA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.066e-22
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 
Query:  126 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            ++TL+DSAA+RV   L  R + + L+LGV+  GC+G++Y L + DE    D + EDKGVK+++D K+L  + GT++DFV + L   F F NPN K +CGCGESF
Sbjct:    2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
[Close]
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ISCA_ECODH (Iron-binding protein iscA OS=Escherichia coli (strain K12 / DH10B) GN=iscA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.066e-22
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 
Query:  126 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            ++TL+DSAA+RV   L  R + + L+LGV+  GC+G++Y L + DE    D + EDKGVK+++D K+L  + GT++DFV + L   F F NPN K +CGCGESF
Sbjct:    2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
[Close]
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ISCA_ECOBW (Iron-binding protein iscA OS=Escherichia coli (strain K12 / BW2952) GN=iscA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.066e-22
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 
Query:  126 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            ++TL+DSAA+RV   L  R + + L+LGV+  GC+G++Y L + DE    D + EDKGVK+++D K+L  + GT++DFV + L   F F NPN K +CGCGESF
Sbjct:    2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
[Close]
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ISCA_ECO8A (Iron-binding protein iscA OS=Escherichia coli O8 (strain IAI1) GN=iscA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.066e-22
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 
Query:  126 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            ++TL+DSAA+RV   L  R + + L+LGV+  GC+G++Y L + DE    D + EDKGVK+++D K+L  + GT++DFV + L   F F NPN K +CGCGESF
Sbjct:    2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
[Close]
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ISCA_ECO81 (Iron-binding protein iscA OS=Escherichia coli O81 (strain ED1a) GN=iscA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.066e-22
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 
Query:  126 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            ++TL+DSAA+RV   L  R + + L+LGV+  GC+G++Y L + DE    D + EDKGVK+++D K+L  + GT++DFV + L   F F NPN K +CGCGESF
Sbjct:    2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
[Close]
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ISCA_ECO7I (Iron-binding protein iscA OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=iscA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.066e-22
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 
Query:  126 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            ++TL+DSAA+RV   L  R + + L+LGV+  GC+G++Y L + DE    D + EDKGVK+++D K+L  + GT++DFV + L   F F NPN K +CGCGESF
Sbjct:    2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
[Close]
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ISCA_ECO57 (Iron-binding protein iscA OS=Escherichia coli O157:H7 GN=iscA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.066e-22
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 
Query:  126 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            ++TL+DSAA+RV   L  R + + L+LGV+  GC+G++Y L + DE    D + EDKGVK+++D K+L  + GT++DFV + L   F F NPN K +CGCGESF
Sbjct:    2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
[Close]
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ISCA_ECO55 (Iron-binding protein iscA OS=Escherichia coli (strain 55989 / EAEC) GN=iscA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.066e-22
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 
Query:  126 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            ++TL+DSAA+RV   L  R + + L+LGV+  GC+G++Y L + DE    D + EDKGVK+++D K+L  + GT++DFV + L   F F NPN K +CGCGESF
Sbjct:    2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
[Close]
BLAST of FC922054 vs. ExPASy Swiss-Prot
Match: ISCA_ECO45 (Iron-binding protein iscA OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=iscA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.066e-22
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 3 
Query:  126 AVTLTDSAASRVRHLLQQRQRPY-LKLGVKARGCNGLSYTLNYADERAKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCGESF 434
            ++TL+DSAA+RV   L  R + + L+LGV+  GC+G++Y L + DE    D + EDKGVK+++D K+L  + GT++DFV + L   F F NPN K +CGCGESF
Sbjct:    2 SITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCGESF 105
The following BLAST results are available for this feature:
BLAST of FC922054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
ISCA_ECOL53.066e-2248.08Iron-binding protein iscA OS=Escherichia coli O6:K... [more]
ISCA_ECOK13.066e-2248.08Iron-binding protein iscA OS=Escherichia coli O1:K... [more]
ISCA_ECODH3.066e-2248.08Iron-binding protein iscA OS=Escherichia coli (str... [more]
ISCA_ECOBW3.066e-2248.08Iron-binding protein iscA OS=Escherichia coli (str... [more]
ISCA_ECO8A3.066e-2248.08Iron-binding protein iscA OS=Escherichia coli O8 (... [more]
ISCA_ECO813.066e-2248.08Iron-binding protein iscA OS=Escherichia coli O81 ... [more]
ISCA_ECO7I3.066e-2248.08Iron-binding protein iscA OS=Escherichia coli O7:K... [more]
ISCA_ECO573.066e-2248.08Iron-binding protein iscA OS=Escherichia coli O157... [more]
ISCA_ECO553.066e-2248.08Iron-binding protein iscA OS=Escherichia coli (str... [more]
ISCA_ECO453.066e-2248.08Iron-binding protein iscA OS=Escherichia coli O45:... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAM1DA06RM1 SLH Citrus sinensis cDNA clone KN0AAM1DA06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922054 ID=FC922054; Name=FC922054; organism=Citrus sinensis; type=EST; length=740bp
AATTTTCTTTTTTTGAAAAAAAAGGAAATTAAATAGAAAAAGATTGCGTG
ACATTTTGGATATGATCGATGGCTTCGTTTCTGGCGCAAGCCGCTGAGAA
AATCGGACCGGCCGTTAGGCGGCAGGCCGTGACGTTAACAGACTCCGCCG
CATCTAGAGTACGTCACCTCCTCCAGCAACGCCAGCGACCTTACCTCAAG
CTCGGCGTCAAGGCCCGTGGCTGCAACGGCTTGTCCTACACCCTCAATTA
CGCCGATGAGAGAGCTAAGTTTGATGAGTTGGTTGAGGATAAGGGTGTGA
AGATACTGATTGATCCAAAAGCTCTCATGCACGTTATTGGGACCAAAATG
GATTTTGTAGATGATAAGCTCAGGTCTGAGTTTGTATTCATTAATCCAAA
CTCTAAAGGGCAGTGTGGTTGTGGTGAATCCTTTATGACAACCAGCAGTA
GTGGAGCGTCTAAGCAGGGTGGAAGCTAGGGATTCTTACAAACTAATAGT
ACATGAAGAATGAACGTAGATGATTCTTTTCCCTGGCTGGCCAAGCATTA
CGCACTTGTCTGAAGGTTGTGAATGAAAGGTAGACATCCTCGGTGAGCTT
TAATGGCAGTTGGAGCAACAGGGGCTTTACTAATTCACGTCCTGGGAATC
ATTGCTGTTTTGCCGTCTACAAACAAATTTGTAAAACTATTGTAGCATTT
TTTTTCCTGGTTTTGACAAAAATACCTTTGTAACCTGATT
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