DN621028

Overview
NameDN621028
Unique NameDN621028
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length628
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH2_HAEIN (Cell division protease ftsH homolog 2 OS=Haemophilus influenzae GN=ftsH-B PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.087e-32
Identity = 69/168 (41.07%), Postives = 110/168 (65.48%), Query Frame = -2
Query:  124 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 627
            +DPV K++IIPRG+A G+TFF P  +++     S+  LE++++    GR+AE++I+GEEN++TGASND    + +AR MV ++GFS+K+G +      G  FLG+ M+  K  S  TA  +D EVR +V   Y RA++I+  ++DILH +   L++ ET++ E+   L
Sbjct:  173 HDPVHKVTIIPRGRALGVTFFLPEGDQIS---ISQKQLESKLSTLYAGRLAEDLIYGEENISTGASNDIKVATNIARNMVTQWGFSEKLGPILYTEDEGEVFLGRSMAKAKHMSDETAHSIDEEVRAIVNRNYARAREILIDNMDILHAMKDALVKYETIEEEQIKQL 337          
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH1_HAEIN (Cell division protease ftsH homolog 1 OS=Haemophilus influenzae GN=ftsH-A PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.087e-32
Identity = 69/168 (41.07%), Postives = 110/168 (65.48%), Query Frame = -2
Query:  124 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 627
            +DPV K++IIPRG+A G+TFF P  +++     S+  LE++++    GR+AE++I+GEEN++TGASND    + +AR MV ++GFS+K+G +      G  FLG+ M+  K  S  TA  +D EVR +V   Y RA++I+  ++DILH +   L++ ET++ E+   L
Sbjct:  427 HDPVHKVTIIPRGRALGVTFFLPEGDQIS---ISQKQLESKLSTLYAGRLAEDLIYGEENISTGASNDIKVATNIARNMVTQWGFSEKLGPILYTEDEGEVFLGRSMAKAKHMSDETAHSIDEEVRAIVNRNYARAREILIDNMDILHAMKDALVKYETIEEEQIKQL 591          
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH_BUCBP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=ftsH PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.131e-32
Identity = 71/168 (42.26%), Postives = 109/168 (64.88%), Query Frame = -2
Query:  124 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 627
            +DP  K++IIPRG+A G+TFF P ++ L     +++ LE+Q++   GGR+AEE+I+G  NV+TGA ND    + +AR MV ++GFSKK+G +      G  FLG+ ++  K  S  TA ++D EV+ LVE  Y RAK+I+  ++DILH +   LI+ ET++  +   L
Sbjct:  428 HDPAHKVTIIPRGRALGVTFFLPKDDVLS---INKNKLESQISTLYGGRLAEEIIYGVNNVSTGAHNDIKVATNLARNMVTQWGFSKKLGPLLYSEEEGEIFLGRTVTKSKHMSDETARIIDEEVKLLVEKNYNRAKKILEENLDILHAMKDALIKYETINSRQIDDL 592          
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAI (Cell division protease ftsH OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ftsH PE=3 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.131e-32
Identity = 70/161 (43.48%), Postives = 107/161 (66.46%), Query Frame = -2
Query:  145 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVD 627
            +DP  K++IIPRG+A G+TFF P  + L     SR  LE+Q++   GGR+AEE+I+G +NV+TGA ND    + +A+ MV ++GFS+K+G +      G  FLG+ ++  K  S  TA ++D EV+ L+E  Y+RA+ I+  +IDILH + + LI+ ET+D
Sbjct:  428 HDPAHKVTIIPRGRALGVTFFLPESDTLS---ISRQKLESQISTLYGGRLAEEIIYGAKNVSTGAYNDIKIATSLAKNMVTQWGFSEKLGPLLYAEEEGEIFLGRSVAKAKHMSDETARIIDEEVKLLIEINYSRARNILNENIDILHAMKEALIKYETID 585          
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH_MYCLE (Cell division protease ftsH homolog OS=Mycobacterium leprae GN=ftsH PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.567e-31
Identity = 72/168 (42.86%), Postives = 106/168 (63.10%), Query Frame = -2
Query:  121 DPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLF 624
            +P+ K++I+ RG+ GG     P E++   GL +RS +  Q+  A+GGR AEE++F E   TTGA +D  + +++AR MV  FG S K+G V  G   G+PFLG+ M +Q DYS   A  +D EVR+L+E A+T A +I+T + D+L  LA  L+EKET+   E   +F
Sbjct:  440 EPIYKVTILARGRTGGHAVAVPEEDK---GLRTRSEMIAQLVFAMGGRAAEELVFREP--TTGAVSDIEKATKIARSMVTEFGMSSKLGAVRYGSEHGDPFLGRTMGTQADYSHEVARDIDDEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELEGIF 602          
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH2_SYNY3 (Cell division protease ftsH homolog 2 OS=Synechocystis sp. (strain PCC 6803) GN=slr1390 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.567e-31
Identity = 72/168 (42.86%), Postives = 109/168 (64.88%), Query Frame = -2
Query:  124 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 627
            +DPV K+++IPRGQA GLT+F P E++    L +R+ +  ++A  LGGRVAEEVIFG++ VTTGA ND  +++ +ARQMV + G S  +GLVA+   G   F G     + +YS   A  +D E++ +V  A+ RA +II  + +++  L   LI++ET++GE F  L
Sbjct:  486 HDPVEKVTLIPRGQAQGLTWFTPDEDQ---SLMTRNQMIARIAGLLGGRVAEEVIFGDDEVTTGAGNDIEKITYLARQMVTKLGMS-SLGLVALEEEGDRNFSGGDWGKRSEYSEDIAARIDREIQAIVTAAHQRATRIIEENRNLMDLLVDALIDQETIEGEHFRQL 649          
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH_ODOSI (Cell division protease ftsH homolog OS=Odontella sinensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.965e-31
Identity = 76/169 (44.97%), Postives = 109/169 (64.50%), Query Frame = -2
Query:  124 YDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPG-GNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 627
            +D V KI++ PRG A GLT+F P E++    L SRS L  ++   LGGR AE+VIFGE  VTTGAS+D  QV+ +ARQMV RFG S  IG +A+     G  FLG  M+S  +Y+   AD +D EVR+++   Y +A +I+  +  ++  + + L++KET+DG+EF  L
Sbjct:  461 HDEVEKITLTPRGGAKGLTWFTPEEDQ---SLLSRSALLARIITTLGGRAAEQVIFGEPEVTTGASSDLQQVTNLARQMVTRFGMS-NIGPLALEDESTGQVFLGGNMASGSEYAENIADRIDDEVRKIITYCYEKAIEIVLDNRVVIDLIVEKLLDKETMDGDEFREL 625          
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH_BACSU (Cell division protease ftsH homolog OS=Bacillus subtilis GN=ftsH PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.267e-30
Identity = 72/172 (41.86%), Postives = 109/172 (63.37%), Query Frame = -2
Query:  112 DPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIG-GPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDG 624
            D V K++I+PRGQAGG     P E+R      ++  L +++   LGGRVAEE+IFGE  V+TGA NDF + + +AR+MV  FG S+K+G +  G   GG  FLG+  +++++YS   A  +D E++ +++  Y RAKQI+T + D L  +AQ L++ ET+D E+   L   G
Sbjct:  438 DMVHKVTIVPRGQAGGYAVMLPREDRY---FQTKPELLDKIVGLLGGRVAEEIIFGE--VSTGAHNDFQRATNIARRMVTEFGMSEKLGPLQFGQSQGGQVFLGRDFNNEQNYSDQIAYEIDQEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLDAEQIKHLIDHG 604          
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH_BACPF (Cell division protease ftsH homolog OS=Bacillus pseudofirmus GN=ftsH PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.866e-30
Identity = 72/173 (41.62%), Postives = 110/173 (63.58%), Query Frame = -2
Query:  109 DPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIG-LVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGK 624
            D V K++I+PRG AGG     P E+R      ++  L +++   LGGRVAEEV FGE  V+TGA NDF + + +AR+MV  +G S+K+G +  I G GG  FLG+ + ++++YS A A  +D EV+ +++  Y R KQI+  + D L  +A+ L++ ET+D E+  SL  +GK
Sbjct:  443 DMVHKVTIVPRGMAGGYAVMLPKEDRY---FMTQPELLDKIIGLLGGRVAEEVTFGE--VSTGAHNDFQRATGIARKMVTEYGMSEKLGPMQFISGSGGQVFLGRDIQNEQNYSDAIAHEIDLEVQRIIKECYARCKQILLENKDSLDLVAKTLLDMETLDAEQIKSLVHEGK 610          
BLAST of DN621028 vs. ExPASy Swiss-Prot
Match: FTSH_RICBR (Cell division protease ftsH homolog OS=Rickettsia bellii (strain RML369-C) GN=ftsH PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.595e-30
Identity = 71/167 (42.51%), Postives = 106/167 (63.47%), Query Frame = -2
Query:  124 DPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGEENVTTGASNDFMQVSRVARQMVERFGFSKKIGLVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVETAYTRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSL 624
            DP+ K +IIPRG+A G+    P  +R       R  +E  +AVA+ GRVAEE+IFG+E VT+GAS+D    +R+A+ MV  +G S K+G V  G    + +  +  SS  D S +T++++D EV+++V T Y  AK I+T H+D LH LA+ LIE ET+ G++  +L
Sbjct:  432 DPIHKATIIPRGRALGMVMRLPENDRFSM---PRDKMEADIAVAMAGRVAEEIIFGKEKVTSGASSDIKMATRMAKAMVTDWGLSDKVGPVYHGSASEDMYTNRNSSS--DRSESTSELIDEEVKKIVTTGYDLAKDILTKHLDQLHILAKALIEYETLSGQQIKNL 593          
The following BLAST results are available for this feature:
BLAST of DN621028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
FTSH2_HAEIN1.087e-3241.07Cell division protease ftsH homolog 2 OS=Haemophil... [more]
FTSH1_HAEIN1.087e-3241.07Cell division protease ftsH homolog 1 OS=Haemophil... [more]
FTSH_BUCBP4.131e-3242.26Cell division protease ftsH OS=Buchnera aphidicola... [more]
FTSH_BUCAI4.131e-3243.48Cell division protease ftsH OS=Buchnera aphidicola... [more]
FTSH_MYCLE4.567e-3142.86Cell division protease ftsH homolog OS=Mycobacteri... [more]
FTSH2_SYNY34.567e-3142.86Cell division protease ftsH homolog 2 OS=Synechocy... [more]
FTSH_ODOSI5.965e-3144.97Cell division protease ftsH homolog OS=Odontella s... [more]
FTSH_BACSU2.267e-3041.86Cell division protease ftsH homolog OS=Bacillus su... [more]
FTSH_BACPF3.866e-3041.62Cell division protease ftsH homolog OS=Bacillus ps... [more]
FTSH_RICBR6.595e-3042.51Cell division protease ftsH homolog OS=Rickettsia ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06C08_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621028 ID=DN621028; Name=DN621028; organism=Citrus sinensis; type=EST; length=628bp
TTTTTTTTTCTAAAATGATAATTTAATTACTTGATTTTACATGGGCATAT
ACAACACGAATCTGAATTCTGATTCTTTCATGTACAATCAGGCAACAAAT
AGCTCAGCTTTTCCATCAATGAAAAGGCTCATAAATTCTTCTCCATCAAC
GGTTTCTTTCTCTATGAGGAGTTGAGCAAGCTTGTGAAGGATGTCAATGT
GGGTTGTGATGATCTGCTTGGCCCTTGTATATGCTGTTTCAACCAATTCT
CTGACCTCTGCATCCACCACATCGGCAGTTGCCATGGAGTAGTCTTTCTG
AGAAGACATTTGTTGACCCAAGAATGGATTTCCACCAGGTCCTCCAATGG
CAACTAGTCCAATTTTCTTGCTAAACCCAAATCTTTCAACCATCTGCCGT
GCTACCCGTGAAACTTGCATGAAGTCATTTGATGCTCCTGTTGTCACATT
TTCCTCGCCAAAAATGACTTCTTCTGCAACCCTTCCACCAAGTGCGACAG
CCATCTGATTCTCCAGGTAGCTCCTGCTGTAAAGTCCAGACTCAAGCCTC
TCTTCACTTGGAGCGAAAAAGGTAAGCCCACCAGCTTGGCCACGAGGAAT
GATGGAAATCTTGGCTACAGGATCATAT
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